RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 DDIT4Q9NX09 232 aa16.41■□□□□ 0.22
BRAT1-202ENST00000421712 STAP1Q9ULZ2 295 aa16.41■□□□□ 0.22
BRAT1-202ENST00000421712 TLR6Q9Y2C9 796 aa16.41■□□□□ 0.22
BRAT1-202ENST00000421712 MYOFQ9NZM1 2061 aa16.41■□□□□ 0.22
BRAT1-202ENST00000421712 F5P12259 2224 aa16.4■□□□□ 0.22
BRAT1-202ENST00000421712 NEDD8-MDP1E9PL57 170 aa16.4■□□□□ 0.22
BRAT1-202ENST00000421712 M0QYT0 321 aa16.4■□□□□ 0.22
BRAT1-202ENST00000421712 PI15O43692 258 aa16.4■□□□□ 0.22
BRAT1-202ENST00000421712 MOCS2O96007 188 aaPredicted RBP16.4■□□□□ 0.22
BRAT1-202ENST00000421712 AOC1P19801 751 aa16.4■□□□□ 0.22
BRAT1-202ENST00000421712 TARSP26639 723 aaKnown RBP16.4■□□□□ 0.22
BRAT1-202ENST00000421712 AVPR2P30518 371 aa16.4■□□□□ 0.22
BRAT1-202ENST00000421712 SCNN1AP37088 669 aa16.4■□□□□ 0.22
BRAT1-202ENST00000421712 MATKP42679 507 aa16.4■□□□□ 0.22
BRAT1-202ENST00000421712 GALK1P51570 392 aa16.4■□□□□ 0.22
BRAT1-202ENST00000421712 VCPP55072 806 aaKnown RBP16.4■□□□□ 0.22
BRAT1-202ENST00000421712 C1QBPQ07021 282 aaKnown RBP16.4■□□□□ 0.22
BRAT1-202ENST00000421712 GRSF1Q12849 480 aaKnown RBP eCLIP16.4■□□□□ 0.22
BRAT1-202ENST00000421712 TXNDC11Q6PKC3 985 aa16.4■□□□□ 0.22
BRAT1-202ENST00000421712 NAT16Q8N8M0 369 aa16.4■□□□□ 0.22
BRAT1-202ENST00000421712 P2RY13Q9BPV8 354 aa16.4■□□□□ 0.22
BRAT1-202ENST00000421712 DDX23Q9BUQ8 820 aaKnown RBP16.4■□□□□ 0.22
BRAT1-202ENST00000421712 BBS2Q9BXC9 721 aa16.4■□□□□ 0.22
BRAT1-202ENST00000421712 LMAN1LQ9HAT1 526 aa16.4■□□□□ 0.22
BRAT1-202ENST00000421712 TAS2R14Q9NYV8 317 aa16.4■□□□□ 0.22
BRAT1-202ENST00000421712 SLC12A6Q9UHW9 1150 aa16.4■□□□□ 0.22
BRAT1-202ENST00000421712 COL4A3Q01955 1670 aa16.4■□□□□ 0.22
BRAT1-202ENST00000421712 DDX3XO00571 662 aaKnown RBP eCLIP16.39■□□□□ 0.217e-8■□□□□ 9.7
BRAT1-202ENST00000421712 TRDMT1O14717 391 aaKnown RBP16.39■□□□□ 0.21
BRAT1-202ENST00000421712 IRAK2O43187 625 aa16.39■□□□□ 0.21
BRAT1-202ENST00000421712 APOEP02649 317 aa16.39■□□□□ 0.21
BRAT1-202ENST00000421712 FTLP02792 175 aaPredicted RBP16.39■□□□□ 0.21
BRAT1-202ENST00000421712 CYBBP04839 570 aa16.39■□□□□ 0.21
BRAT1-202ENST00000421712 KRT3P12035 628 aa16.39■□□□□ 0.21
BRAT1-202ENST00000421712 SULT1E1P49888 294 aa16.39■□□□□ 0.21
BRAT1-202ENST00000421712 ZNF75DP51815 510 aa16.39■□□□□ 0.21
BRAT1-202ENST00000421712 ADKP55263 362 aaKnown RBP16.39■□□□□ 0.21
BRAT1-202ENST00000421712 PITX1P78337 314 aaPredicted RBP16.39■□□□□ 0.21
BRAT1-202ENST00000421712 RING1Q06587 406 aa16.39■□□□□ 0.21
BRAT1-202ENST00000421712 NNTQ13423 1086 aa16.39■□□□□ 0.21
BRAT1-202ENST00000421712 ZC3H12AQ5D1E8 599 aaKnown RBP16.39■□□□□ 0.21
BRAT1-202ENST00000421712 SND1Q7KZF4 910 aaKnown RBP eCLIP16.39■□□□□ 0.21
BRAT1-202ENST00000421712 MCOLN2Q8IZK6 566 aa16.39■□□□□ 0.21
BRAT1-202ENST00000421712 CD101Q93033 1021 aa16.39■□□□□ 0.21
BRAT1-202ENST00000421712 CHFRQ96EP1 664 aa16.39■□□□□ 0.21
BRAT1-202ENST00000421712 FCRL2Q96LA5 508 aaPredicted RBP16.39■□□□□ 0.21
BRAT1-202ENST00000421712 SYT11Q9BT88 431 aa16.39■□□□□ 0.21
BRAT1-202ENST00000421712 DEF6Q9H4E7 631 aa16.39■□□□□ 0.21
BRAT1-202ENST00000421712 RRN3Q9NYV6 651 aa16.39■□□□□ 0.21
BRAT1-202ENST00000421712 ADAMTS1Q9UHI8 967 aa16.39■□□□□ 0.21
BRAT1-202ENST00000421712 ANKRD62A6NC57 917 aa16.38■□□□□ 0.21
BRAT1-202ENST00000421712 AKR1B15C9JRZ8 316 aaPredicted RBP16.38■□□□□ 0.21
BRAT1-202ENST00000421712 TSPAN3O60637 253 aa16.38■□□□□ 0.21
BRAT1-202ENST00000421712 GJB6O95452 261 aa16.38■□□□□ 0.21
BRAT1-202ENST00000421712 PLEKP08567 350 aaPredicted RBP16.38■□□□□ 0.21
BRAT1-202ENST00000421712 CCR1P32246 355 aa16.38■□□□□ 0.21
BRAT1-202ENST00000421712 SLC6A11P48066 632 aa16.38■□□□□ 0.21
BRAT1-202ENST00000421712 DEUP1Q05D60 604 aa16.38■□□□□ 0.21
BRAT1-202ENST00000421712 PTP4A2Q12974 167 aa16.38■□□□□ 0.21
BRAT1-202ENST00000421712 ADGRF1Q5T601 910 aa16.38■□□□□ 0.21
BRAT1-202ENST00000421712 NAIF1Q69YI7 327 aaPredicted RBP16.38■□□□□ 0.21
BRAT1-202ENST00000421712 DNAJC24Q6P3W2 148 aa16.38■□□□□ 0.21
BRAT1-202ENST00000421712 MON1BQ7L1V2 547 aa16.38■□□□□ 0.21
BRAT1-202ENST00000421712 DNAAF5Q86Y56 855 aa16.38■□□□□ 0.21
BRAT1-202ENST00000421712 DRC7Q8IY82 874 aa16.38■□□□□ 0.21
BRAT1-202ENST00000421712 EMC1Q8N766 993 aa16.38■□□□□ 0.21
BRAT1-202ENST00000421712 TMEM105Q8N8V8 129 aa16.38■□□□□ 0.21
BRAT1-202ENST00000421712 ATP6V0D2Q8N8Y2 350 aa16.38■□□□□ 0.21
BRAT1-202ENST00000421712 DDI1Q8WTU0 396 aa16.38■□□□□ 0.21
BRAT1-202ENST00000421712 XPO6Q96QU8 1125 aaKnown RBP16.38■□□□□ 0.21
BRAT1-202ENST00000421712 DDX50Q9BQ39 737 aaKnown RBP16.38■□□□□ 0.21
BRAT1-202ENST00000421712 OSBPL6Q9BZF3 934 aa16.38■□□□□ 0.21
BRAT1-202ENST00000421712 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.38■□□□□ 0.21
BRAT1-202ENST00000421712 PLK2Q9NYY3 685 aa16.38■□□□□ 0.21
BRAT1-202ENST00000421712 TMEM59LQ9UK28 342 aa16.38■□□□□ 0.21
BRAT1-202ENST00000421712 GOLGA6L7A0A1B0GV03 622 aa16.37■□□□□ 0.21
BRAT1-202ENST00000421712 SHISA7A6NL88 538 aa16.37■□□□□ 0.21
BRAT1-202ENST00000421712 HOXC11O43248 304 aaPredicted RBP16.37■□□□□ 0.21
BRAT1-202ENST00000421712 ACSL4O60488 711 aa16.37■□□□□ 0.21
BRAT1-202ENST00000421712 MFAP3LO75121 409 aa16.37■□□□□ 0.21
BRAT1-202ENST00000421712 RTN2O75298 545 aa16.37■□□□□ 0.21
BRAT1-202ENST00000421712 LATS1O95835 1130 aa16.37■□□□□ 0.21
BRAT1-202ENST00000421712 F9P00740 461 aa16.37■□□□□ 0.21
BRAT1-202ENST00000421712 IGLV3-27P01718 113 aa16.37■□□□□ 0.21
BRAT1-202ENST00000421712 SLC2A3P11169 496 aa16.37■□□□□ 0.21
BRAT1-202ENST00000421712 GZMAP12544 262 aa16.37■□□□□ 0.21
BRAT1-202ENST00000421712 TYRP14679 529 aa16.37■□□□□ 0.21
BRAT1-202ENST00000421712 PDGFRAP16234 1089 aa16.37■□□□□ 0.21
BRAT1-202ENST00000421712 ABCB4P21439 1286 aa16.37■□□□□ 0.21
BRAT1-202ENST00000421712 FLT3P36888 993 aa16.37■□□□□ 0.21
BRAT1-202ENST00000421712 ATP11AP98196 1134 aa16.37■□□□□ 0.21
BRAT1-202ENST00000421712 LRRC32Q14392 662 aa16.37■□□□□ 0.21
BRAT1-202ENST00000421712 SLC25A52Q3SY17 297 aa16.37■□□□□ 0.21
BRAT1-202ENST00000421712 HGSNATQ68CP4 663 aa16.37■□□□□ 0.21
BRAT1-202ENST00000421712 DCUN1D2Q6PH85 259 aa16.37■□□□□ 0.21
BRAT1-202ENST00000421712 CNGA4Q8IV77 575 aa16.37■□□□□ 0.21
BRAT1-202ENST00000421712 CCDC105Q8IYK2 499 aa16.37■□□□□ 0.21
BRAT1-202ENST00000421712 CPXM2Q8N436 756 aa16.37■□□□□ 0.21
BRAT1-202ENST00000421712 C3orf20Q8ND61 904 aa16.37■□□□□ 0.21
BRAT1-202ENST00000421712 RXFP2Q8WXD0 754 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms