RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 TRPC3Q13507 836 aa21.96■■□□□ 1.11
USP48-205ENST00000421625 ZNF699Q32M78 642 aa21.96■■□□□ 1.11
USP48-205ENST00000421625 ABHD15Q6UXT9 468 aa21.96■■□□□ 1.11
USP48-205ENST00000421625 ZNF534Q76KX8 674 aa21.96■■□□□ 1.11
USP48-205ENST00000421625 GSDMBQ8TAX9 411 aa21.96■■□□□ 1.11
USP48-205ENST00000421625 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.96■■□□□ 1.11
USP48-205ENST00000421625 GPATCH2LQ9NWQ4 482 aa21.96■■□□□ 1.11
USP48-205ENST00000421625 UBAP1Q9NZ09 502 aa21.96■■□□□ 1.11
USP48-205ENST00000421625 PIK3R2O00459 728 aa21.95■■□□□ 1.1
USP48-205ENST00000421625 ADORA2AP29274 412 aa21.95■■□□□ 1.1
USP48-205ENST00000421625 TFAMQ00059 246 aaKnown RBP21.95■■□□□ 1.1
USP48-205ENST00000421625 XKR3Q5GH77 459 aa21.95■■□□□ 1.1
USP48-205ENST00000421625 KBTBD6Q86V97 674 aa21.95■■□□□ 1.1
USP48-205ENST00000421625 FBXW8Q8N3Y1 598 aa21.95■■□□□ 1.1
USP48-205ENST00000421625 METTL25Q8N6Q8 603 aa21.95■■□□□ 1.1
USP48-205ENST00000421625 PLD5Q8N7P1 536 aa21.95■■□□□ 1.1
USP48-205ENST00000421625 WNK4Q96J92 1243 aa21.95■■□□□ 1.1
USP48-205ENST00000421625 SIGLEC10Q96LC7 697 aa21.95■■□□□ 1.1
USP48-205ENST00000421625 KLC2Q9H0B6 622 aa21.95■■□□□ 1.1
USP48-205ENST00000421625 MAP3K20Q9NYL2 800 aaKnown RBP21.95■■□□□ 1.1
USP48-205ENST00000421625 AP1G1O43747 822 aa21.95■■□□□ 1.1
USP48-205ENST00000421625 ENDOD1O94919 500 aa21.95■■□□□ 1.1
USP48-205ENST00000421625 ZBED1O96006 694 aa21.95■■□□□ 1.1
USP48-205ENST00000421625 PMLP29590 882 aa21.95■■□□□ 1.1
USP48-205ENST00000421625 RGS2P41220 211 aa21.95■■□□□ 1.1
USP48-205ENST00000421625 GRIA1P42261 906 aa21.95■■□□□ 1.1
USP48-205ENST00000421625 GABRB2P47870 512 aa21.95■■□□□ 1.1
USP48-205ENST00000421625 ALDH1A3P47895 512 aa21.95■■□□□ 1.1
USP48-205ENST00000421625 SCNN1BP51168 640 aa21.95■■□□□ 1.1
USP48-205ENST00000421625 CDH8P55286 799 aa21.95■■□□□ 1.1
USP48-205ENST00000421625 CDO1Q16878 200 aa21.95■■□□□ 1.1
USP48-205ENST00000421625 C15orf59Q2T9L4 293 aaPredicted RBP21.95■■□□□ 1.1
USP48-205ENST00000421625 RTKN2Q8IZC4 609 aa21.95■■□□□ 1.1
USP48-205ENST00000421625 BTBD9Q96Q07 612 aa21.95■■□□□ 1.1
USP48-205ENST00000421625 SORT1Q99523 831 aa21.95■■□□□ 1.1
USP48-205ENST00000421625 PTTG2Q9NZH5 202 aa21.95■■□□□ 1.1
USP48-205ENST00000421625 HMGCRP04035 888 aa21.94■■□□□ 1.1
USP48-205ENST00000421625 GMPRP36959 345 aa21.94■■□□□ 1.1
USP48-205ENST00000421625 SH3BGRP55822 239 aaPredicted RBP21.94■■□□□ 1.1
USP48-205ENST00000421625 SMAD1Q15797 465 aaKnown RBP21.94■■□□□ 1.1
USP48-205ENST00000421625 OGFRL1Q5TC84 451 aaPredicted RBP21.94■■□□□ 1.1
USP48-205ENST00000421625 DCUN1D1Q96GG9 259 aa21.94■■□□□ 1.1
USP48-205ENST00000421625 SIKE1Q9BRV8 207 aa21.94■■□□□ 1.1
USP48-205ENST00000421625 TCHPQ9BT92 498 aa21.94■■□□□ 1.1
USP48-205ENST00000421625 CCDC160A6NGH7 325 aa21.94■■□□□ 1.1
USP48-205ENST00000421625 WDR46O15213 610 aaKnown RBP21.94■■□□□ 1.1
USP48-205ENST00000421625 FAM189A1O60320 539 aa21.94■■□□□ 1.1
USP48-205ENST00000421625 CBLBQ13191 982 aa21.94■■□□□ 1.1
USP48-205ENST00000421625 PCLAFQ15004 111 aa21.94■■□□□ 1.1
USP48-205ENST00000421625 TRNP1Q6NT89 227 aa21.94■■□□□ 1.1
USP48-205ENST00000421625 KLHDC10Q6PID8 442 aa21.94■■□□□ 1.1
USP48-205ENST00000421625 RNF157Q96PX1 679 aa21.94■■□□□ 1.1
USP48-205ENST00000421625 LHX5Q9H2C1 402 aa21.94■■□□□ 1.1
USP48-205ENST00000421625 IFT122Q9HBG6 1241 aa21.94■■□□□ 1.1
USP48-205ENST00000421625 MYOCOSA0A1B0GUC4 107 aa21.93■■□□□ 1.1
USP48-205ENST00000421625 CSDE1O75534 798 aaKnown RBP21.93■■□□□ 1.1
USP48-205ENST00000421625 ASNSP08243 561 aa21.93■■□□□ 1.1
USP48-205ENST00000421625 FAM200BP0CF97 657 aa21.93■■□□□ 1.1
USP48-205ENST00000421625 ARL2P36404 184 aa21.93■■□□□ 1.1
USP48-205ENST00000421625 TFDP2Q14188 446 aa21.93■■□□□ 1.1
USP48-205ENST00000421625 NADK2Q4G0N4 442 aa21.93■■□□□ 1.1
USP48-205ENST00000421625 FAM102AQ5T9C2 384 aaPredicted RBP21.93■■□□□ 1.1
USP48-205ENST00000421625 OLFML2BQ68BL8 750 aa21.93■■□□□ 1.1
USP48-205ENST00000421625 C10orf107Q8IVU9 208 aa21.93■■□□□ 1.1
USP48-205ENST00000421625 EBNA1BP2Q99848 306 aaKnown RBP21.93■■□□□ 1.1
USP48-205ENST00000421625 FRMD8Q9BZ67 464 aaPredicted RBP21.93■■□□□ 1.1
USP48-205ENST00000421625 XYLT2Q9H1B5 865 aa21.93■■□□□ 1.1
USP48-205ENST00000421625 NRDE2Q9H7Z3 1164 aa21.93■■□□□ 1.1
USP48-205ENST00000421625 DDX18Q9NVP1 670 aaKnown RBP21.93■■□□□ 1.1
USP48-205ENST00000421625 NDUFA13Q9P0J0 144 aa21.93■■□□□ 1.1
USP48-205ENST00000421625 CTDP1Q9Y5B0 961 aaPredicted RBP21.93■■□□□ 1.1
USP48-205ENST00000421625 DCXO43602 365 aa21.93■■□□□ 1.1
USP48-205ENST00000421625 PEX1O43933 1283 aa21.93■■□□□ 1.1
USP48-205ENST00000421625 METTL18O95568 372 aa21.93■■□□□ 1.1
USP48-205ENST00000421625 CLPTM1O96005 669 aa21.93■■□□□ 1.1
USP48-205ENST00000421625 ALDOAP04075 364 aaKnown RBP21.93■■□□□ 1.1
USP48-205ENST00000421625 CD1EP15812 388 aa21.93■■□□□ 1.1
USP48-205ENST00000421625 ITGA9Q13797 1035 aa21.93■■□□□ 1.1
USP48-205ENST00000421625 GK3PQ14409 553 aa21.93■■□□□ 1.1
USP48-205ENST00000421625 FAM47CQ5HY64 1035 aa21.93■■□□□ 1.1
USP48-205ENST00000421625 SLC4A11Q8NBS3 891 aa21.93■■□□□ 1.1
USP48-205ENST00000421625 PIP4K2CQ8TBX8 421 aa21.93■■□□□ 1.1
USP48-205ENST00000421625 RTP4Q96DX8 246 aa21.93■■□□□ 1.1
USP48-205ENST00000421625 CMTM5Q96DZ9 223 aa21.93■■□□□ 1.1
USP48-205ENST00000421625 STN1Q9H668 368 aaKnown RBP21.93■■□□□ 1.1
USP48-205ENST00000421625 SIP14410 1827 aa21.93■■□□□ 1.1
USP48-205ENST00000421625 ZNF195O14628 629 aa21.93■■□□□ 1.1
USP48-205ENST00000421625 ADCY3O60266 1144 aa21.93■■□□□ 1.1
USP48-205ENST00000421625 RPL5P46777 297 aaKnown RBP21.93■■□□□ 1.1
USP48-205ENST00000421625 DUOXA2Q1HG44 320 aa21.93■■□□□ 1.1
USP48-205ENST00000421625 MARVELD2Q8N4S9 558 aa21.93■■□□□ 1.1
USP48-205ENST00000421625 ADPGKQ9BRR6 497 aa21.93■■□□□ 1.1
USP48-205ENST00000421625 GRIP2Q9C0E4 1043 aa21.93■■□□□ 1.1
USP48-205ENST00000421625 DHX33Q9H6R0 707 aaKnown RBP21.93■■□□□ 1.1
USP48-205ENST00000421625 DNAAF2Q9NVR5 837 aaKnown RBP21.93■■□□□ 1.1
USP48-205ENST00000421625 ASNSD1Q9NWL6 643 aa21.93■■□□□ 1.1
USP48-205ENST00000421625 HMGXB4Q9UGU5 601 aa21.93■■□□□ 1.1
USP48-205ENST00000421625 LZTS1Q9Y250 596 aa21.93■■□□□ 1.1
USP48-205ENST00000421625 TPP1O14773 563 aa21.92■■□□□ 1.1
USP48-205ENST00000421625 PLIN3O60664 434 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms