RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 HAUS6Q7Z4H7 955 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 NANOGNBQ7Z5D8 188 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 CLVS1Q8IUQ0 354 aaPredicted RBP8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 UNC45BQ8IWX7 931 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 ADGRF2Q8IZF7 708 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 ABRAQ8N0Z2 381 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 CERKQ8TCT0 537 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 ZNF597Q96LX8 424 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 CGREF1Q99674 301 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 LXNQ9BS40 222 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 ST6GALNAC4Q9H4F1 302 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 PALMDQ9NP74 551 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 OLAHQ9NV23 265 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 VPS28Q9UK41 221 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 ARHGEF37A1IGU5 675 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 GOLGA8TH3BQL2 631 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 PSMD12O00232 456 aaPredicted RBP8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 GAS7O60861 476 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 STAMBPO95630 424 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 OXSR1O95747 527 aaPredicted RBP8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 HOXA13P31271 388 aaPredicted RBP8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 THOP1P52888 689 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 DYNLT1P63172 113 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 CTBSQ01459 385 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 DPYSL3Q14195 570 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 CCDC153Q494R4 210 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 FSCBQ5H9T9 825 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 GPR141Q7Z602 305 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 UBR7Q8N806 425 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 GSDMBQ8TAX9 411 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 CFAP36Q96G28 342 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 RMND5BQ96G75 393 aaPredicted RBP8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 WRNIP1Q96S55 665 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 DCUN1D5Q9BTE7 237 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 ARMC7Q9H6L4 198 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 CAAP1Q9H8G2 361 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 PNPLA3Q9NST1 481 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 PACSIN3Q9UKS6 424 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 GAKO14976 1311 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 CROCCQ5TZA2 2017 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 C7orf72A4D263 438 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 TRDMT1O14717 391 aaKnown RBP8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 XRCC1P18887 633 aaPredicted RBP8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 EPHA3P29320 983 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 KLF10Q13118 480 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 PPP2R5DQ14738 602 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 AOC3Q16853 763 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 ZBED5Q49AG3 693 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 PIGGQ5H8A4 983 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 STXBP5Q5T5C0 1151 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 DEPDC1Q5TB30 811 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 PPP1R2P3Q6NXS1 205 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 BBS12Q6ZW61 710 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 ARMCX6Q7L4S7 300 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 TBC1D15Q8TC07 691 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 THAP11Q96EK4 314 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 OSBPL11Q9BXB4 747 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 ZNF341Q9BYN7 854 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 SERPINB13Q9UIV8 391 aa8.27□□□□□ -1.09
HMGXB4-202ENST00000418170 HMX2A2RU54 273 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 TRIM64CA6NLI5 447 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 LSM1O15116 133 aaKnown RBP8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 ZBTB14O43829 449 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 FOXD2O60548 495 aaPredicted RBP8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 CST8O60676 142 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 NFKBIAP25963 317 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 SHMT1P34896 483 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 GABRB2P47870 512 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 EIF2B2P49770 351 aaKnown RBP8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 RPS3AP61247 264 aaKnown RBP8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 ESRRGP62508 458 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 KCNJ11Q14654 390 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 SNRNP48Q6IEG0 339 aaKnown RBP8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 OGFOD2Q6N063 350 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 C16orf46Q6P387 395 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 FBXO11Q86XK2 927 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 C8orf37Q96NL8 207 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 SORT1Q99523 831 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 AGTPBP1Q9UPW5 1226 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 SPTLC1O15269 473 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 UGT1A9O60656 530 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 CLASP2O75122 1294 aaKnown RBP8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 AVILO75366 819 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 SULT1C4O75897 302 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 TOP3BO95985 862 aaKnown RBP8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 S100A1P23297 94 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 MGAT5BQ3V5L5 792 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 MFSD4BQ5TF39 518 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 VWA5B1Q5TIE3 1220 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 NEPROQ6NW34 567 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 C16orf89Q6UX73 402 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 BNC2Q6ZN30 1099 aaPredicted RBP8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 FAM71DQ8N9W8 422 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 BHLHE22Q8NFJ8 381 aaPredicted RBP8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 DCAF4Q8WV16 495 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 EME1Q96AY2 570 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 MFSD14AQ96MC6 490 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 WDR11Q9BZH6 1224 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 UGT1A7Q9HAW7 530 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 UGT1A10Q9HAW8 530 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms