RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 AHCYL1O43865 530 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 CBFA2T3O75081 653 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 E2F6O75461 281 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 NEBLO76041 1014 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 TPPPO94811 219 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 NPTXRO95502 500 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 IGLV1-40P01703 118 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 FESP07332 822 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 POU2F2P09086 479 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 PNMA6AP0CW24 399 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 INSRRP14616 1297 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 CCND2P30279 289 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 TCF7P36402 384 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 MNAT1P51948 309 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 DGKEP52429 567 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 PCBP3P57721 371 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 CREMQ03060 361 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 TLE1Q04724 770 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 PRPF4BQ13523 1007 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 PGM5Q15124 567 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 SMAD1Q15797 465 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 DUOXA1Q1HG43 343 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 INF2Q27J81 1249 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 CCDC184Q52MB2 194 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 NOMO2Q5JPE7 1267 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 EEF1DP3Q658K8 133 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 E4F1Q66K89 784 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 MBLAC2Q68D91 279 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 TTC19Q6DKK2 380 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 ZCCHC8Q6NZY4 707 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 GLB1LQ6UWU2 654 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 ZPBP2Q6X784 338 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 LHFPL2Q6ZUX7 228 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 LPCAT2Q7L5N7 544 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 THAP5Q7Z6K1 395 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 RABEPKQ7Z6M1 372 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 FERMT3Q86UX7 667 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 CCDC170Q8IYT3 715 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 IFNL3Q8IZI9 196 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 PLD6Q8N2A8 252 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 RCBTB1Q8NDN9 531 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 CEP76Q8TAP6 659 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 FGF11Q92914 225 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 TMEM176AQ96HP8 235 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 MBOAT7Q96N66 472 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 LGMNQ99538 433 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 OSBPL1AQ9BXW6 950 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 UNC45AQ9H3U1 944 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 CHST12Q9NRB3 414 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 TMEM74BQ9NUR3 256 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 AP5S1Q9NUS5 200 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 HCFC1R1Q9NWW0 138 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 LCMT1Q9UIC8 334 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 FBXW11Q9UKB1 542 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 TELO2Q9Y4R8 837 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 PCDHA1Q9Y5I3 950 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 NUP205Q92621 2012 aa5.91□□□□□ -1.46
ECHDC1-206ENST00000417628 ATG2BQ96BY7 2078 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 A0A0U1RQF3 1178 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 TMEM82A0PJX8 343 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 HMMRO75330 724 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 ESR1P03372 595 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 SERPINF2P08697 491 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 CCDC175P0C221 793 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 ATXN1LP0C7T5 689 aaKnown RBP5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 CEBPBP17676 345 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 FSTP19883 344 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 CLCN7P51798 805 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 DSG1Q02413 1049 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 CCDC15Q0P6D6 951 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 STRN3Q13033 797 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 KCNAB2Q13303 367 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 PLCB4Q15147 1175 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 DHCR24Q15392 516 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 CCDC38Q502W7 563 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 FAM78AQ5JUQ0 283 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 LYSMD4Q5XG99 296 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 FBXO38Q6PIJ6 1188 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 RNF111Q6ZNA4 994 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 KSR1Q8IVT5 923 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 TMEM151AQ8N4L1 468 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 GBP7Q8N8V2 638 aaPredicted RBP5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 NEK11Q8NG66 645 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 IL31RAQ8NI17 732 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 PCDH19Q8TAB3 1148 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 FAM76AQ8TAV0 307 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 LZICQ8WZA0 190 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 DIO2Q92813 273 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 PPP1R14BQ96C90 147 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 BICD1Q96G01 975 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 CCDC34Q96HJ3 373 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 CSRNP2Q9H175 543 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 RETREG1Q9H6L5 497 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 FNIP2Q9P278 1114 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 DNMT3BQ9UBC3 853 aaKnown RBP5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 WDR37Q9Y2I8 494 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 ZNF281Q9Y2X9 895 aa5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 TMEM98Q9Y2Y6 226 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms