RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 IGLV3-27P01718 113 aa24.04■■□□□ 1.44
SMARCB1-205ENST00000417137 SLC2A3P11169 496 aa24.04■■□□□ 1.44
SMARCB1-205ENST00000417137 ADH5P11766 374 aa24.04■■□□□ 1.44
SMARCB1-205ENST00000417137 HNRNPH3P31942 346 aaKnown RBP24.04■■□□□ 1.44
SMARCB1-205ENST00000417137 GSCP56915 257 aaPredicted RBP24.04■■□□□ 1.44
SMARCB1-205ENST00000417137 HGSNATQ68CP4 663 aa24.04■■□□□ 1.44
SMARCB1-205ENST00000417137 CWF19L1Q69YN2 538 aaKnown RBP24.04■■□□□ 1.44
SMARCB1-205ENST00000417137 TMC6Q7Z403 805 aa24.04■■□□□ 1.44
SMARCB1-205ENST00000417137 PJA1Q8NG27 643 aa24.04■■□□□ 1.44
SMARCB1-205ENST00000417137 ADAM32Q8TC27 787 aa24.04■■□□□ 1.44
SMARCB1-205ENST00000417137 AZIN2Q96A70 460 aa24.04■■□□□ 1.44
SMARCB1-205ENST00000417137 MRFAP1L1Q96HT8 127 aa24.04■■□□□ 1.44
SMARCB1-205ENST00000417137 FOXQ1Q9C009 403 aa24.04■■□□□ 1.44
SMARCB1-205ENST00000417137 SLC12A6Q9UHW9 1150 aa24.04■■□□□ 1.44
SMARCB1-205ENST00000417137 NDRG2Q9UN36 371 aaKnown RBP24.04■■□□□ 1.44
SMARCB1-205ENST00000417137 PIEZO1Q92508 2521 aa24.04■■□□□ 1.44
SMARCB1-205ENST00000417137 TRDMT1O14717 391 aaKnown RBP24.03■■□□□ 1.44
SMARCB1-205ENST00000417137 IRAK2O43187 625 aa24.03■■□□□ 1.44
SMARCB1-205ENST00000417137 F9P00740 461 aa24.03■■□□□ 1.44
SMARCB1-205ENST00000417137 APOEP02649 317 aa24.03■■□□□ 1.44
SMARCB1-205ENST00000417137 ZNF75DP51815 510 aa24.03■■□□□ 1.44
SMARCB1-205ENST00000417137 GRSF1Q12849 480 aaKnown RBP eCLIP24.03■■□□□ 1.44
SMARCB1-205ENST00000417137 PTP4A2Q12974 167 aa24.03■■□□□ 1.44
SMARCB1-205ENST00000417137 MTA1Q13330 715 aa24.03■■□□□ 1.44
SMARCB1-205ENST00000417137 ANO4Q32M45 955 aa24.03■■□□□ 1.44
SMARCB1-205ENST00000417137 MON1BQ7L1V2 547 aa24.03■■□□□ 1.44
SMARCB1-205ENST00000417137 TMEM25Q86YD3 366 aa24.03■■□□□ 1.44
SMARCB1-205ENST00000417137 CNGA4Q8IV77 575 aa24.03■■□□□ 1.44
SMARCB1-205ENST00000417137 MCOLN2Q8IZK6 566 aa24.03■■□□□ 1.44
SMARCB1-205ENST00000417137 RNF34Q969K3 372 aa24.03■■□□□ 1.44
SMARCB1-205ENST00000417137 DNAJC7Q99615 494 aa24.03■■□□□ 1.44
SMARCB1-205ENST00000417137 P2RY13Q9BPV8 354 aa24.03■■□□□ 1.44
SMARCB1-205ENST00000417137 DDX50Q9BQ39 737 aaKnown RBP24.03■■□□□ 1.44
SMARCB1-205ENST00000417137 SELENOOQ9BVL4 669 aa24.03■■□□□ 1.44
SMARCB1-205ENST00000417137 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.03■■□□□ 1.44
SMARCB1-205ENST00000417137 DDIT4Q9NX09 232 aa24.03■■□□□ 1.44
SMARCB1-205ENST00000417137 TMEM59LQ9UK28 342 aa24.03■■□□□ 1.44
SMARCB1-205ENST00000417137 MUC6Q6W4X9 2439 aa24.02■■□□□ 1.44
SMARCB1-205ENST00000417137 SHISA7A6NL88 538 aa24.02■■□□□ 1.44
SMARCB1-205ENST00000417137 TMCO5BA8MYB1 307 aa24.02■■□□□ 1.44
SMARCB1-205ENST00000417137 DDX3XO00571 662 aaKnown RBP eCLIP24.02■■□□□ 1.449e-12■■■■□ 22.2
SMARCB1-205ENST00000417137 HOXC11O43248 304 aaPredicted RBP24.02■■□□□ 1.44
SMARCB1-205ENST00000417137 RTN2O75298 545 aa24.02■■□□□ 1.44
SMARCB1-205ENST00000417137 IGLV3-25P01717 112 aa24.02■■□□□ 1.44
SMARCB1-205ENST00000417137 CYBBP04839 570 aa24.02■■□□□ 1.44
SMARCB1-205ENST00000417137 KRT3P12035 628 aa24.02■■□□□ 1.44
SMARCB1-205ENST00000417137 TARSP26639 723 aaKnown RBP24.02■■□□□ 1.44
SMARCB1-205ENST00000417137 AVPR2P30518 371 aa24.02■■□□□ 1.44
SMARCB1-205ENST00000417137 PON2Q15165 354 aa24.02■■□□□ 1.44
SMARCB1-205ENST00000417137 SLC25A52Q3SY17 297 aa24.02■■□□□ 1.44
SMARCB1-205ENST00000417137 PREPLQ4J6C6 727 aaPredicted RBP24.02■■□□□ 1.44
SMARCB1-205ENST00000417137 ADGRF1Q5T601 910 aa24.02■■□□□ 1.44
SMARCB1-205ENST00000417137 TXNDC11Q6PKC3 985 aa24.02■■□□□ 1.44
SMARCB1-205ENST00000417137 TPGS1Q6ZTW0 290 aa24.02■■□□□ 1.44
SMARCB1-205ENST00000417137 SND1Q7KZF4 910 aaKnown RBP eCLIP24.02■■□□□ 1.44
SMARCB1-205ENST00000417137 CPXM2Q8N436 756 aa24.02■■□□□ 1.44
SMARCB1-205ENST00000417137 C3orf20Q8ND61 904 aa24.02■■□□□ 1.44
SMARCB1-205ENST00000417137 CD101Q93033 1021 aa24.02■■□□□ 1.44
SMARCB1-205ENST00000417137 SLC39A13Q96H72 371 aa24.02■■□□□ 1.44
SMARCB1-205ENST00000417137 FCRL2Q96LA5 508 aaPredicted RBP24.02■■□□□ 1.44
SMARCB1-205ENST00000417137 METTL5Q9NRN9 209 aaKnown RBP24.02■■□□□ 1.44
SMARCB1-205ENST00000417137 ADAMTS1Q9UHI8 967 aa24.02■■□□□ 1.44
SMARCB1-205ENST00000417137 STOML2Q9UJZ1 356 aa24.02■■□□□ 1.44
SMARCB1-205ENST00000417137 ANKRD62A6NC57 917 aa24.01■■□□□ 1.43
SMARCB1-205ENST00000417137 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.01■■□□□ 1.43
SMARCB1-205ENST00000417137 AKR1B15C9JRZ8 316 aaPredicted RBP24.01■■□□□ 1.43
SMARCB1-205ENST00000417137 M0QYT0 321 aa24.01■■□□□ 1.43
SMARCB1-205ENST00000417137 FTLP02792 175 aaPredicted RBP24.01■■□□□ 1.43
SMARCB1-205ENST00000417137 CCR1P32246 355 aa24.01■■□□□ 1.43
SMARCB1-205ENST00000417137 EIF2DP41214 584 aaKnown RBP24.01■■□□□ 1.43
SMARCB1-205ENST00000417137 MAGEA9P43362 315 aa24.01■■□□□ 1.43
SMARCB1-205ENST00000417137 GALK1P51570 392 aa24.01■■□□□ 1.43
SMARCB1-205ENST00000417137 LRRC32Q14392 662 aa24.01■■□□□ 1.43
SMARCB1-205ENST00000417137 ARID5BQ14865 1188 aa24.01■■□□□ 1.43
SMARCB1-205ENST00000417137 DGKKQ5KSL6 1271 aa24.01■■□□□ 1.43
SMARCB1-205ENST00000417137 PHLDB2Q86SQ0 1253 aa24.01■■□□□ 1.43
SMARCB1-205ENST00000417137 ATP6V0D2Q8N8Y2 350 aa24.01■■□□□ 1.43
SMARCB1-205ENST00000417137 TRIM11Q96F44 468 aa24.01■■□□□ 1.43
SMARCB1-205ENST00000417137 XPO6Q96QU8 1125 aaKnown RBP24.01■■□□□ 1.43
SMARCB1-205ENST00000417137 NPY6RQ99463 290 aa24.01■■□□□ 1.43
SMARCB1-205ENST00000417137 BBS2Q9BXC9 721 aa24.01■■□□□ 1.43
SMARCB1-205ENST00000417137 IRX2Q9BZI1 471 aaPredicted RBP24.01■■□□□ 1.43
SMARCB1-205ENST00000417137 KCNH6Q9H252 994 aa24.01■■□□□ 1.43
SMARCB1-205ENST00000417137 MARK1Q9P0L2 795 aa24.01■■□□□ 1.43
SMARCB1-205ENST00000417137 MTF2Q9Y483 593 aaPredicted RBP24.01■■□□□ 1.43
SMARCB1-205ENST00000417137 PAXBP1Q9Y5B6 917 aa24.01■■□□□ 1.43
SMARCB1-205ENST00000417137 KIF26AQ9ULI4 1882 aaPredicted RBP24■■□□□ 1.43
SMARCB1-205ENST00000417137 TICRRQ7Z2Z1 1910 aa24■■□□□ 1.43
SMARCB1-205ENST00000417137 SYNJ2BP-COX16A0A087WUM0 186 aa24■■□□□ 1.43
SMARCB1-205ENST00000417137 SIGLEC16A6NMB1 481 aa24■■□□□ 1.43
SMARCB1-205ENST00000417137 PI15O43692 258 aa24■■□□□ 1.43
SMARCB1-205ENST00000417137 ACSL4O60488 711 aa24■■□□□ 1.43
SMARCB1-205ENST00000417137 MFAP3LO75121 409 aa24■■□□□ 1.43
SMARCB1-205ENST00000417137 ABCB4P21439 1286 aa24■■□□□ 1.43
SMARCB1-205ENST00000417137 DRD1P21728 446 aa24■■□□□ 1.43
SMARCB1-205ENST00000417137 SULT1E1P49888 294 aa24■■□□□ 1.43
SMARCB1-205ENST00000417137 NUBP1P53384 320 aa24■■□□□ 1.43
SMARCB1-205ENST00000417137 TBX2Q13207 712 aaPredicted RBP24■■□□□ 1.43
SMARCB1-205ENST00000417137 NME3Q13232 169 aa24■■□□□ 1.43
SMARCB1-205ENST00000417137 EIF4EBP2Q13542 120 aaPredicted RBP24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms