RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 ASPMQ8IZT6 3477 aa15.53■□□□□ 0.08
RPS28-201ENST00000417088 HYAL3O43820 417 aaPredicted RBP15.53■□□□□ 0.08
RPS28-201ENST00000417088 ZNF202O95125 648 aa15.53■□□□□ 0.08
RPS28-201ENST00000417088 CD59P13987 128 aa15.53■□□□□ 0.08
RPS28-201ENST00000417088 CD6P30203 668 aa15.53■□□□□ 0.08
RPS28-201ENST00000417088 IL12RB1P42701 662 aa15.53■□□□□ 0.08
RPS28-201ENST00000417088 SIM1P81133 766 aaPredicted RBP15.53■□□□□ 0.08
RPS28-201ENST00000417088 STARD3Q14849 445 aa15.53■□□□□ 0.08
RPS28-201ENST00000417088 PM20D1Q6GTS8 502 aa15.53■□□□□ 0.08
RPS28-201ENST00000417088 RSRC2Q7L4I2 434 aaKnown RBP15.53■□□□□ 0.08
RPS28-201ENST00000417088 DENND1CQ8IV53 801 aa15.53■□□□□ 0.08
RPS28-201ENST00000417088 RGL4Q8IZJ4 473 aa15.53■□□□□ 0.08
RPS28-201ENST00000417088 GATA6Q92908 595 aa15.53■□□□□ 0.08
RPS28-201ENST00000417088 FOXJ1Q92949 421 aa15.53■□□□□ 0.08
RPS28-201ENST00000417088 MKRN2Q9H000 416 aaKnown RBP15.53■□□□□ 0.08
RPS28-201ENST00000417088 FAM124BQ9H5Z6 455 aaPredicted RBP15.53■□□□□ 0.08
RPS28-201ENST00000417088 ITM2CQ9NQX7 267 aa15.53■□□□□ 0.08
RPS28-201ENST00000417088 DNAAF2Q9NVR5 837 aaKnown RBP15.53■□□□□ 0.08
RPS28-201ENST00000417088 MARCH2Q9P0N8 246 aa15.53■□□□□ 0.08
RPS28-201ENST00000417088 USP36Q9P275 1121 aaKnown RBP15.53■□□□□ 0.08
RPS28-201ENST00000417088 STRIP2Q9ULQ0 834 aa15.53■□□□□ 0.08
RPS28-201ENST00000417088 AKAP13Q12802 2813 aa15.53■□□□□ 0.08
RPS28-201ENST00000417088 FAM208BQ5VWN6 2430 aa15.52■□□□□ 0.08
RPS28-201ENST00000417088 SLC12A8A0AV02 714 aa15.52■□□□□ 0.08
RPS28-201ENST00000417088 TULP2O00295 520 aa15.52■□□□□ 0.08
RPS28-201ENST00000417088 NPC1O15118 1278 aa15.52■□□□□ 0.08
RPS28-201ENST00000417088 CETN3O15182 167 aa15.52■□□□□ 0.08
RPS28-201ENST00000417088 STX10O60499 249 aa15.52■□□□□ 0.08
RPS28-201ENST00000417088 CYBBP04839 570 aa15.52■□□□□ 0.08
RPS28-201ENST00000417088 SYPP08247 313 aa15.52■□□□□ 0.08
RPS28-201ENST00000417088 MAOBP27338 520 aa15.52■□□□□ 0.08
RPS28-201ENST00000417088 TKTL1P51854 596 aa15.52■□□□□ 0.08
RPS28-201ENST00000417088 ZNF132P52740 706 aa15.52■□□□□ 0.08
RPS28-201ENST00000417088 FAM193AP78312 1265 aa15.52■□□□□ 0.08
RPS28-201ENST00000417088 PLEKHG6Q3KR16 790 aa15.52■□□□□ 0.08
RPS28-201ENST00000417088 SYCP2LQ5T4T6 812 aa15.52■□□□□ 0.08
RPS28-201ENST00000417088 BHLHA9Q7RTU4 235 aa15.52■□□□□ 0.08
RPS28-201ENST00000417088 FAM217AQ8IXS0 508 aa15.52■□□□□ 0.08
RPS28-201ENST00000417088 CPXM2Q8N436 756 aa15.52■□□□□ 0.08
RPS28-201ENST00000417088 RBBP8NLQ8NC74 664 aaPredicted RBP15.52■□□□□ 0.08
RPS28-201ENST00000417088 UCMAQ8WVF2 138 aa15.52■□□□□ 0.08
RPS28-201ENST00000417088 NDRG1Q92597 394 aaKnown RBP15.52■□□□□ 0.08
RPS28-201ENST00000417088 TOE1Q96GM8 510 aaKnown RBP15.52■□□□□ 0.08
RPS28-201ENST00000417088 ULBP1Q9BZM6 244 aa15.52■□□□□ 0.08
RPS28-201ENST00000417088 SCAND2PQ9GZW5 306 aaPredicted RBP15.52■□□□□ 0.08
RPS28-201ENST00000417088 PRDM16Q9HAZ2 1276 aa15.52■□□□□ 0.08
RPS28-201ENST00000417088 ELOVL2Q9NXB9 296 aa15.52■□□□□ 0.08
RPS28-201ENST00000417088 WSB2Q9NYS7 404 aaPredicted RBP15.52■□□□□ 0.08
RPS28-201ENST00000417088 KCNJ18B7U540 433 aa15.51■□□□□ 0.07
RPS28-201ENST00000417088 ZZEF1O43149 2961 aa15.51■□□□□ 0.07
RPS28-201ENST00000417088 GJB3O75712 270 aa15.51■□□□□ 0.07
RPS28-201ENST00000417088 ZBED1O96006 694 aa15.51■□□□□ 0.07
RPS28-201ENST00000417088 EPB41P11171 864 aaKnown RBP15.51■□□□□ 0.07
RPS28-201ENST00000417088 SLC8A3P57103 927 aa15.51■□□□□ 0.07
RPS28-201ENST00000417088 PDE4CQ08493 712 aa15.51■□□□□ 0.07
RPS28-201ENST00000417088 ZNF234Q14588 700 aa15.51■□□□□ 0.07
RPS28-201ENST00000417088 TRIP4Q15650 581 aaPredicted RBP15.51■□□□□ 0.07
RPS28-201ENST00000417088 GOLGA7BQ2TAP0 167 aa15.51■□□□□ 0.07
RPS28-201ENST00000417088 CBWD6Q4V339 395 aa15.51■□□□□ 0.07
RPS28-201ENST00000417088 CBWD3Q5JTY5 395 aa15.51■□□□□ 0.07
RPS28-201ENST00000417088 WDR45BQ5MNZ6 344 aa15.51■□□□□ 0.07
RPS28-201ENST00000417088 CBWD5Q5RIA9 395 aa15.51■□□□□ 0.07
RPS28-201ENST00000417088 TMEM215Q68D42 235 aa15.51■□□□□ 0.07
RPS28-201ENST00000417088 ANKS1BQ7Z6G8 1248 aa15.51■□□□□ 0.07
RPS28-201ENST00000417088 SORCS1Q8WY21 1168 aa15.51■□□□□ 0.07
RPS28-201ENST00000417088 DNASE2BQ8WZ79 361 aa15.51■□□□□ 0.07
RPS28-201ENST00000417088 PLD4Q96BZ4 506 aa15.51■□□□□ 0.07
RPS28-201ENST00000417088 SLC2A11Q9BYW1 496 aa15.51■□□□□ 0.07
RPS28-201ENST00000417088 SUSD2Q9UGT4 822 aa15.51■□□□□ 0.07
RPS28-201ENST00000417088 RALYQ9UKM9 306 aaKnown RBP15.51■□□□□ 0.07
RPS28-201ENST00000417088 COQ4Q9Y3A0 265 aa15.51■□□□□ 0.07
RPS28-201ENST00000417088 NEUROG3Q9Y4Z2 214 aa15.51■□□□□ 0.07
RPS28-201ENST00000417088 TMEM8BA6NDV4 472 aa15.5■□□□□ 0.07
RPS28-201ENST00000417088 XPO1O14980 1071 aaKnown RBP15.5■□□□□ 0.07
RPS28-201ENST00000417088 GNSP15586 552 aa15.5■□□□□ 0.07
RPS28-201ENST00000417088 PRCPP42785 496 aa15.5■□□□□ 0.07
RPS28-201ENST00000417088 COPAP53621 1224 aa15.5■□□□□ 0.07
RPS28-201ENST00000417088 SLC14A1Q13336 389 aa15.5■□□□□ 0.07
RPS28-201ENST00000417088 EIF4HQ15056 248 aaKnown RBP15.5■□□□□ 0.07
RPS28-201ENST00000417088 TMPRSS6Q8IU80 811 aa15.5■□□□□ 0.07
RPS28-201ENST00000417088 DDI1Q8WTU0 396 aa15.5■□□□□ 0.07
RPS28-201ENST00000417088 SIPA1Q96FS4 1042 aa15.5■□□□□ 0.07
RPS28-201ENST00000417088 GPR174Q9BXC1 333 aa15.5■□□□□ 0.07
RPS28-201ENST00000417088 CIPCQ9C0C6 399 aa15.5■□□□□ 0.07
RPS28-201ENST00000417088 GDPD2Q9HCC8 539 aa15.5■□□□□ 0.07
RPS28-201ENST00000417088 KLK13Q9UKR3 277 aa15.5■□□□□ 0.07
RPS28-201ENST00000417088 TSPAN16Q9UKR8 245 aa15.5■□□□□ 0.07
RPS28-201ENST00000417088 MSRB2Q9Y3D2 182 aa15.5■□□□□ 0.07
RPS28-201ENST00000417088 ATP6V1DQ9Y5K8 247 aa15.5■□□□□ 0.07
RPS28-201ENST00000417088 CACNA1GO43497 2377 aa15.49■□□□□ 0.07
RPS28-201ENST00000417088 SH3BP5O60239 455 aa15.49■□□□□ 0.07
RPS28-201ENST00000417088 SYNCRIPO60506 623 aaKnown RBP15.49■□□□□ 0.07
RPS28-201ENST00000417088 NCAM1P13591 858 aa15.49■□□□□ 0.07
RPS28-201ENST00000417088 PRKCHP24723 683 aa15.49■□□□□ 0.07
RPS28-201ENST00000417088 TPMTP51580 245 aa15.49■□□□□ 0.07
RPS28-201ENST00000417088 BCAT1P54687 386 aa15.49■□□□□ 0.07
RPS28-201ENST00000417088 BST2Q10589 180 aaKnown RBP15.49■□□□□ 0.07
RPS28-201ENST00000417088 GRIK2Q13002 908 aa15.49■□□□□ 0.07
RPS28-201ENST00000417088 PNOCQ13519 176 aa15.49■□□□□ 0.07
RPS28-201ENST00000417088 CUL2Q13617 745 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms