RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 ZBED1O96006 694 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 SYPP08247 313 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 CD6P30203 668 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 BCAT1P54687 386 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 PNOCQ13519 176 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 EIF4HQ15056 248 aaKnown RBP15.11■□□□□ 0.01
PAF1-202ENST00000416728 E2F5Q15329 346 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 GOLGA7BQ2TAP0 167 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 CBWD6Q4V339 395 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 CBWD3Q5JTY5 395 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 CBWD5Q5RIA9 395 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 PIP4P1Q86T03 277 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 CPXM2Q8N436 756 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 MINDY1Q8N5J2 469 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 PLD4Q96BZ4 506 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 SCNM1Q9BWG6 230 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 ULBP1Q9BZM6 244 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 PRDM16Q9HAZ2 1276 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 THAP10Q9P2Z0 257 aaPredicted RBP15.11■□□□□ 0.01
PAF1-202ENST00000416728 HESX1Q9UBX0 185 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 SUSD2Q9UGT4 822 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 GON4LQ3T8J9 2241 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 USP24Q9UPU5 2620 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 XPO1O14980 1071 aaKnown RBP15.11■□□□□ 0.01
PAF1-202ENST00000416728 SLC16A3O15427 465 aaKnown RBP15.11■□□□□ 0.01
PAF1-202ENST00000416728 SYNCRIPO60506 623 aaKnown RBP15.11■□□□□ 0.01
PAF1-202ENST00000416728 GNSP15586 552 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 IL12RB1P42701 662 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 PRCPP42785 496 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 SIM1P81133 766 aaPredicted RBP15.11■□□□□ 0.01
PAF1-202ENST00000416728 PDE4CQ08493 712 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 CUL2Q13617 745 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 PLEKHG6Q3KR16 790 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 SGO2Q562F6 1265 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 WDR45BQ5MNZ6 344 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 PM20D1Q6GTS8 502 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 METTL3Q86U44 580 aaKnown RBP15.11■□□□□ 0.01
PAF1-202ENST00000416728 DDI1Q8WTU0 396 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 PIWIL1Q96J94 861 aaKnown RBP15.11■□□□□ 0.01
PAF1-202ENST00000416728 IPO9Q96P70 1041 aaKnown RBP15.11■□□□□ 0.01
PAF1-202ENST00000416728 SLC2A11Q9BYW1 496 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 CIPCQ9C0C6 399 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 MKRN2Q9H000 416 aaKnown RBP15.11■□□□□ 0.01
PAF1-202ENST00000416728 LRRC4Q9HBW1 653 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 OLA1Q9NTK5 396 aaKnown RBP15.11■□□□□ 0.01
PAF1-202ENST00000416728 ELOVL2Q9NXB9 296 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 TSPAN16Q9UKR8 245 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 COQ4Q9Y3A0 265 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 TNRC6BQ9UPQ9 1833 aaKnown RBP15.1■□□□□ 0.01
PAF1-202ENST00000416728 SPAARA0A1B0GVQ0 90 aa15.1■□□□□ 0.01
PAF1-202ENST00000416728 MEI4A8MW99 385 aa15.1■□□□□ 0.01
PAF1-202ENST00000416728 TULP2O00295 520 aa15.1■□□□□ 0.01
PAF1-202ENST00000416728 CD19P15391 556 aa15.1■□□□□ 0.01
PAF1-202ENST00000416728 HARS2P49590 506 aaKnown RBP15.1■□□□□ 0.01
PAF1-202ENST00000416728 YWHAEP62258 255 aaKnown RBP15.1■□□□□ 0.01
PAF1-202ENST00000416728 FKBP3Q00688 224 aaKnown RBP15.1■□□□□ 0.01
PAF1-202ENST00000416728 BST2Q10589 180 aaKnown RBP15.1■□□□□ 0.01
PAF1-202ENST00000416728 ENPP2Q13822 863 aa15.1■□□□□ 0.01
PAF1-202ENST00000416728 ZNF658Q5TYW1 1059 aaPredicted RBP15.1■□□□□ 0.01
PAF1-202ENST00000416728 TMPRSS6Q8IU80 811 aa15.1■□□□□ 0.01
PAF1-202ENST00000416728 FAM217AQ8IXS0 508 aa15.1■□□□□ 0.01
PAF1-202ENST00000416728 OR2I1PQ8NGU4 316 aa15.1■□□□□ 0.01
PAF1-202ENST00000416728 RNF139Q8WU17 664 aa15.1■□□□□ 0.01
PAF1-202ENST00000416728 NDRG1Q92597 394 aaKnown RBP15.1■□□□□ 0.01
PAF1-202ENST00000416728 TOE1Q96GM8 510 aaKnown RBP15.1■□□□□ 0.01
PAF1-202ENST00000416728 DNAAF2Q9NVR5 837 aaKnown RBP15.1■□□□□ 0.01
PAF1-202ENST00000416728 USP36Q9P275 1121 aaKnown RBP15.1■□□□□ 0.01
PAF1-202ENST00000416728 CEP295Q9C0D2 2601 aa15.09■□□□□ 0.01
PAF1-202ENST00000416728 TIMM44O43615 452 aa15.09■□□□□ 0.01
PAF1-202ENST00000416728 HYAL3O43820 417 aaPredicted RBP15.09■□□□□ 0.01
PAF1-202ENST00000416728 RDXP35241 583 aaKnown RBP15.09■□□□□ 0.01
PAF1-202ENST00000416728 ARID5AQ03989 594 aa15.09■□□□□ 0.01
PAF1-202ENST00000416728 ADIGQ0VDE8 80 aa15.09■□□□□ 0.01
PAF1-202ENST00000416728 ZNF234Q14588 700 aa15.09■□□□□ 0.01
PAF1-202ENST00000416728 TRIP4Q15650 581 aaPredicted RBP15.09■□□□□ 0.01
PAF1-202ENST00000416728 MPPE1Q53F39 396 aa15.09■□□□□ 0.01
PAF1-202ENST00000416728 COBLL1Q53SF7 1204 aa15.09■□□□□ 0.01
PAF1-202ENST00000416728 SERPINA13PQ6UXR4 307 aa15.09■□□□□ 0.01
PAF1-202ENST00000416728 BHLHA9Q7RTU4 235 aa15.09■□□□□ 0.01
PAF1-202ENST00000416728 FMNL3Q8IVF7 1028 aa15.09■□□□□ 0.01
PAF1-202ENST00000416728 FMR1NBQ8N0W7 255 aaPredicted RBP15.09■□□□□ 0.01
PAF1-202ENST00000416728 SIX6OS1Q8N1H7 587 aa15.09■□□□□ 0.01
PAF1-202ENST00000416728 PRCCQ92733 491 aaPredicted RBP15.09■□□□□ 0.01
PAF1-202ENST00000416728 SIPA1Q96FS4 1042 aa15.09■□□□□ 0.01
PAF1-202ENST00000416728 GSDMAQ96QA5 445 aa15.09■□□□□ 0.01
PAF1-202ENST00000416728 GPR174Q9BXC1 333 aa15.09■□□□□ 0.01
PAF1-202ENST00000416728 TMEM121BQ9BXQ6 578 aaPredicted RBP15.09■□□□□ 0.01
PAF1-202ENST00000416728 ITM2CQ9NQX7 267 aa15.09■□□□□ 0.01
PAF1-202ENST00000416728 WSB2Q9NYS7 404 aaPredicted RBP15.09■□□□□ 0.01
PAF1-202ENST00000416728 ARMCX3Q9UH62 379 aaPredicted RBP15.09■□□□□ 0.01
PAF1-202ENST00000416728 ZMIZ1Q9ULJ6 1067 aa15.09■□□□□ 0.01
PAF1-202ENST00000416728 CLEC4EQ9ULY5 219 aa15.09■□□□□ 0.01
PAF1-202ENST00000416728 HBS1LQ9Y450 684 aaKnown RBP15.09■□□□□ 0.01
PAF1-202ENST00000416728 ASCC3Q8N3C0 2202 aaKnown RBP15.09■□□□□ 0.01
PAF1-202ENST00000416728 ZFHX4Q86UP3 3567 aa15.08■□□□□ 0
PAF1-202ENST00000416728 TMEM8BA6NDV4 472 aa15.08■□□□□ 0
PAF1-202ENST00000416728 GOLGA6L4A6NEF3 574 aa15.08■□□□□ 0
PAF1-202ENST00000416728 SMC2O95347 1197 aa15.08■□□□□ 0
PAF1-202ENST00000416728 SETSIPP0DME0 302 aa15.08■□□□□ 0
PAF1-202ENST00000416728 ACADMP11310 421 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms