RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 TDRD5Q8NAT2 981 aaKnown RBP10.91□□□□□ -0.66
COL12A1-203ENST00000416123 CDC42EP4Q9H3Q1 356 aaKnown RBP10.91□□□□□ -0.66
COL12A1-203ENST00000416123 HEY2Q9UBP5 337 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 EFCAB14O75071 495 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 YBX3P16989 372 aaKnown RBP eCLIP10.91□□□□□ -0.66
COL12A1-203ENST00000416123 WSCD1Q658N2 575 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 MMGT1Q8N4V1 131 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 PRPF18Q99633 342 aaKnown RBP10.91□□□□□ -0.66
COL12A1-203ENST00000416123 SLC24A3Q9HC58 644 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 INTS13Q9NVM9 706 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 USE1Q9NZ43 259 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 LNPEPQ9UIQ6 1025 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 A0A0A6YYK5 440 aaPredicted RBP10.91□□□□□ -0.66
COL12A1-203ENST00000416123 TRPC5OSA6NMA1 111 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 E5RJQ4 531 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 SCNN1GP51170 649 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 DEPDC1Q5TB30 811 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 AADACL2Q6P093 401 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 PRR23CQ6ZRP0 262 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 GPR142Q7Z601 462 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 HELQQ8TDG4 1101 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 NSL1Q96IY1 281 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 TINF2Q9BSI4 451 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 FOXP3Q9BZS1 431 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 SAE1Q9UBE0 346 aaPredicted RBP10.91□□□□□ -0.66
COL12A1-203ENST00000416123 MROH1Q8NDA8 1641 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 SERPINI2O75830 405 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 PROSCO94903 275 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 RAB27AP51159 221 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 PPIL2Q13356 520 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 TMEM119Q4V9L6 283 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 ZDHHC6Q9H6R6 413 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 OLFML3Q9NRN5 406 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 SPG21Q9NZD8 308 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 CRYL1Q9Y2S2 319 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 KCNK1O00180 336 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 CATSPER1Q8NEC5 780 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 PHF21AQ96BD5 680 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 APBA2Q99767 749 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 LACRTQ9GZZ8 138 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 VIPAS39Q9H9C1 493 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 ATP13A1Q9HD20 1204 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 CYP39A1Q9NYL5 469 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 SLC27A5Q9Y2P5 690 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 GAKO14976 1311 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 MGAT4DA6NG13 374 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 MAP3K10Q02779 954 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 KCTD19Q17RG1 926 aaPredicted RBP10.91□□□□□ -0.66
COL12A1-203ENST00000416123 ZNF410Q86VK4 478 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 PLD3Q8IV08 490 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 STX19Q8N4C7 294 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 CERS5Q8N5B7 392 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 SENP8Q96LD8 212 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 PAFAH2Q99487 392 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 MROH7Q68CQ1 1323 aa10.91□□□□□ -0.66
COL12A1-203ENST00000416123 GLRA3O75311 464 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 PYGMP11217 842 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 GRK3P35626 688 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 ADCK1Q86TW2 530 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 DEFB106AQ8N104 65 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 TNIP2Q8NFZ5 429 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 GRIN3AQ8TCU5 1115 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 IGF2BP3O00425 579 aaKnown RBP eCLIP10.9□□□□□ -0.66
COL12A1-203ENST00000416123 IFRD1O00458 451 aaPredicted RBP10.9□□□□□ -0.66
COL12A1-203ENST00000416123 TRIM66O15016 1216 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 OAZ1P54368 228 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 RIOX2Q8IUF8 465 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 LRRN4Q8WUT4 740 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 IDI2Q9BXS1 227 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 ACP6Q9NPH0 428 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 HAO1Q9UJM8 370 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 E9PBE3 544 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 KLHL41O60662 606 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 ITGALP20701 1170 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 CNTN1Q12860 1018 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 CENPLQ8N0S6 344 aaPredicted RBP10.9□□□□□ -0.66
COL12A1-203ENST00000416123 ACTL9Q8TC94 416 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 CLDN5O00501 218 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 PARNO95453 639 aaKnown RBP10.9□□□□□ -0.66
COL12A1-203ENST00000416123 SPATA31D3P0C874 917 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 SPATA31D4Q6ZUB0 917 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 SPATA20Q8TB22 786 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 ZMYM5Q9UJ78 669 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 ACKR2O00590 384 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 TNFSF9P41273 254 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 ZBTB17Q13105 803 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 MPP3Q13368 585 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 ALFQ53S48 1182 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 RIN3Q8TB24 985 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 KCNK16Q96T55 309 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 CORO1BQ9BR76 489 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 ZNF229Q9UJW7 825 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 GTF2A1LQ9UNN4 478 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 NFICP08651 508 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 BGNP21810 368 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 C15orf59Q2T9L4 293 aaPredicted RBP10.9□□□□□ -0.66
COL12A1-203ENST00000416123 LRRC34Q8IZ02 419 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 APPL1Q9UKG1 709 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 SHOC2Q9UQ13 582 aa10.9□□□□□ -0.66
COL12A1-203ENST00000416123 TIMM44O43615 452 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms