RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 DCAF12L1Q5VU92 463 aa16.33■□□□□ 0.2
SBDSP1-201ENST00000415772 IL27RAQ6UWB1 636 aa16.33■□□□□ 0.2
SBDSP1-201ENST00000415772 LRSAM1Q6UWE0 723 aa16.33■□□□□ 0.2
SBDSP1-201ENST00000415772 RAB44Q7Z6P3 723 aaPredicted RBP16.33■□□□□ 0.2
SBDSP1-201ENST00000415772 DENND1CQ8IV53 801 aa16.33■□□□□ 0.2
SBDSP1-201ENST00000415772 TTC39CQ8N584 583 aa16.33■□□□□ 0.2
SBDSP1-201ENST00000415772 NUP58Q9BVL2 599 aa16.33■□□□□ 0.2
SBDSP1-201ENST00000415772 SCAND2PQ9GZW5 306 aaPredicted RBP16.33■□□□□ 0.2
SBDSP1-201ENST00000415772 GAREM1Q9H706 876 aa16.33■□□□□ 0.2
SBDSP1-201ENST00000415772 ITM2CQ9NQX7 267 aa16.33■□□□□ 0.2
SBDSP1-201ENST00000415772 WSB2Q9NYS7 404 aaPredicted RBP16.33■□□□□ 0.2
SBDSP1-201ENST00000415772 THAP10Q9P2Z0 257 aaPredicted RBP16.33■□□□□ 0.2
SBDSP1-201ENST00000415772 ZDHHC9Q9Y397 364 aa16.33■□□□□ 0.2
SBDSP1-201ENST00000415772 CEP295Q9C0D2 2601 aa16.32■□□□□ 0.2
SBDSP1-201ENST00000415772 SLC12A8A0AV02 714 aa16.32■□□□□ 0.2
SBDSP1-201ENST00000415772 MAPK13O15264 365 aa16.32■□□□□ 0.2
SBDSP1-201ENST00000415772 BCAT2O15382 392 aaPredicted RBP16.32■□□□□ 0.2
SBDSP1-201ENST00000415772 CILPO75339 1184 aa16.32■□□□□ 0.2
SBDSP1-201ENST00000415772 PSMC2P35998 433 aaKnown RBP16.32■□□□□ 0.2
SBDSP1-201ENST00000415772 GEN1Q17RS7 908 aa16.32■□□□□ 0.2
SBDSP1-201ENST00000415772 PPP1R26Q5T8A7 1209 aaPredicted RBP16.32■□□□□ 0.2
SBDSP1-201ENST00000415772 FRYQ5TBA9 3013 aa16.32■□□□□ 0.2
SBDSP1-201ENST00000415772 FAM124AQ86V42 546 aa16.32■□□□□ 0.2
SBDSP1-201ENST00000415772 ZNF276Q8N554 614 aa16.32■□□□□ 0.2
SBDSP1-201ENST00000415772 PNPLA1Q8N8W4 532 aa16.32■□□□□ 0.2
SBDSP1-201ENST00000415772 TAS1R2Q8TE23 839 aa16.32■□□□□ 0.2
SBDSP1-201ENST00000415772 TMEM174Q8WUU8 243 aa16.32■□□□□ 0.2
SBDSP1-201ENST00000415772 ADAMTS14Q8WXS8 1223 aa16.32■□□□□ 0.2
SBDSP1-201ENST00000415772 CCDC86Q9H6F5 360 aaKnown RBP16.32■□□□□ 0.2
SBDSP1-201ENST00000415772 CD248Q9HCU0 757 aa16.32■□□□□ 0.2
SBDSP1-201ENST00000415772 ELOVL2Q9NXB9 296 aa16.32■□□□□ 0.2
SBDSP1-201ENST00000415772 MARCH2Q9P0N8 246 aa16.32■□□□□ 0.2
SBDSP1-201ENST00000415772 FBXO10Q9UK96 956 aa16.32■□□□□ 0.2
SBDSP1-201ENST00000415772 TRAF3IP3Q9Y228 551 aa16.32■□□□□ 0.2
SBDSP1-201ENST00000415772 NFE2L3Q9Y4A8 694 aa16.32■□□□□ 0.2
SBDSP1-201ENST00000415772 ACTN4O43707 911 aaKnown RBP16.31■□□□□ 0.2
SBDSP1-201ENST00000415772 STX10O60499 249 aa16.31■□□□□ 0.2
SBDSP1-201ENST00000415772 PENKP01210 267 aaPredicted RBP16.31■□□□□ 0.2
SBDSP1-201ENST00000415772 HARS2P49590 506 aaKnown RBP16.31■□□□□ 0.2
SBDSP1-201ENST00000415772 TPMTP51580 245 aa16.31■□□□□ 0.2
SBDSP1-201ENST00000415772 YWHAGP61981 247 aaKnown RBP eCLIP16.31■□□□□ 0.2
SBDSP1-201ENST00000415772 ZNF234Q14588 700 aa16.31■□□□□ 0.2
SBDSP1-201ENST00000415772 SUZ12Q15022 739 aaKnown RBP16.31■□□□□ 0.2
SBDSP1-201ENST00000415772 FNDC3BQ53EP0 1204 aaKnown RBP16.31■□□□□ 0.2
SBDSP1-201ENST00000415772 FYB2Q5VWT5 728 aa16.31■□□□□ 0.2
SBDSP1-201ENST00000415772 SCD5Q86SK9 330 aa16.31■□□□□ 0.2
SBDSP1-201ENST00000415772 PROSER1Q86XN7 944 aa16.31■□□□□ 0.2
SBDSP1-201ENST00000415772 RNF139Q8WU17 664 aa16.31■□□□□ 0.2
SBDSP1-201ENST00000415772 DNASE2BQ8WZ79 361 aa16.31■□□□□ 0.2
SBDSP1-201ENST00000415772 PLD4Q96BZ4 506 aa16.31■□□□□ 0.2
SBDSP1-201ENST00000415772 SPATA32Q96LK8 384 aa16.31■□□□□ 0.2
SBDSP1-201ENST00000415772 SLC2A11Q9BYW1 496 aa16.31■□□□□ 0.2
SBDSP1-201ENST00000415772 MKRN2Q9H000 416 aaKnown RBP16.31■□□□□ 0.2
SBDSP1-201ENST00000415772 TMEM8AQ9HCN3 771 aa16.31■□□□□ 0.2
SBDSP1-201ENST00000415772 TM7SF3Q9NS93 570 aa16.31■□□□□ 0.2
SBDSP1-201ENST00000415772 OLA1Q9NTK5 396 aaKnown RBP16.31■□□□□ 0.2
SBDSP1-201ENST00000415772 USP36Q9P275 1121 aaKnown RBP16.31■□□□□ 0.2
SBDSP1-201ENST00000415772 EIF2B4Q9UI10 523 aaKnown RBP16.31■□□□□ 0.2
SBDSP1-201ENST00000415772 AGO1Q9UL18 857 aaKnown RBP16.31■□□□□ 0.2
SBDSP1-201ENST00000415772 PLA2G4CQ9UP65 541 aa16.31■□□□□ 0.2
SBDSP1-201ENST00000415772 CFAP47Q6ZTR5 3102 aa16.31■□□□□ 0.2
SBDSP1-201ENST00000415772 PCDH15Q96QU1 1955 aa16.31■□□□□ 0.2
SBDSP1-201ENST00000415772 A0A1B0GVL5 298 aa16.3■□□□□ 0.2
SBDSP1-201ENST00000415772 FAM221BA6H8Z2 402 aa16.3■□□□□ 0.2
SBDSP1-201ENST00000415772 TIMM44O43615 452 aa16.3■□□□□ 0.2
SBDSP1-201ENST00000415772 KLKB1P03952 638 aa16.3■□□□□ 0.2
SBDSP1-201ENST00000415772 PFKFB1P16118 471 aa16.3■□□□□ 0.2
SBDSP1-201ENST00000415772 CMA1P23946 247 aa16.3■□□□□ 0.2
SBDSP1-201ENST00000415772 SCAPQ12770 1279 aa16.3■□□□□ 0.2
SBDSP1-201ENST00000415772 ADAM9Q13443 819 aa16.3■□□□□ 0.2
SBDSP1-201ENST00000415772 ACAP1Q15027 740 aa16.3■□□□□ 0.2
SBDSP1-201ENST00000415772 TEAD4Q15561 434 aa16.3■□□□□ 0.2
SBDSP1-201ENST00000415772 MPPE1Q53F39 396 aa16.3■□□□□ 0.2
SBDSP1-201ENST00000415772 KRT39Q6A163 491 aa16.3■□□□□ 0.2
SBDSP1-201ENST00000415772 CPXM2Q8N436 756 aa16.3■□□□□ 0.2
SBDSP1-201ENST00000415772 ENGASEQ8NFI3 743 aa16.3■□□□□ 0.2
SBDSP1-201ENST00000415772 RHBDD1Q8TEB9 315 aa16.3■□□□□ 0.2
SBDSP1-201ENST00000415772 CCDC34Q96HJ3 373 aa16.3■□□□□ 0.2
SBDSP1-201ENST00000415772 TMEM176AQ96HP8 235 aa16.3■□□□□ 0.2
SBDSP1-201ENST00000415772 IPO9Q96P70 1041 aaKnown RBP16.3■□□□□ 0.2
SBDSP1-201ENST00000415772 APOBEC3GQ9HC16 384 aaKnown RBP16.3■□□□□ 0.2
SBDSP1-201ENST00000415772 HESX1Q9UBX0 185 aa16.3■□□□□ 0.2
SBDSP1-201ENST00000415772 MAPK8IP1Q9UQF2 711 aa16.3■□□□□ 0.2
SBDSP1-201ENST00000415772 USP3Q9Y6I4 520 aa16.3■□□□□ 0.2
SBDSP1-201ENST00000415772 CHD6Q8TD26 2715 aa16.3■□□□□ 0.2
SBDSP1-201ENST00000415772 GOLGA8CPA6NN73 597 aa16.29■□□□□ 0.2
SBDSP1-201ENST00000415772 METTL12A8MUP2 240 aa16.29■□□□□ 0.2
SBDSP1-201ENST00000415772 KCNJ18B7U540 433 aa16.29■□□□□ 0.2
SBDSP1-201ENST00000415772 TSPAN3O60637 253 aa16.29■□□□□ 0.2
SBDSP1-201ENST00000415772 GJB3O75712 270 aa16.29■□□□□ 0.2
SBDSP1-201ENST00000415772 SYKP43405 635 aa16.29■□□□□ 0.2
SBDSP1-201ENST00000415772 MXI1P50539 228 aa16.29■□□□□ 0.2
SBDSP1-201ENST00000415772 PPP3CAQ08209 521 aa16.29■□□□□ 0.2
SBDSP1-201ENST00000415772 ADAT2Q7Z6V5 191 aaKnown RBP16.29■□□□□ 0.2
SBDSP1-201ENST00000415772 CDC6Q99741 560 aa16.29■□□□□ 0.2
SBDSP1-201ENST00000415772 ARID3AQ99856 593 aa16.29■□□□□ 0.2
SBDSP1-201ENST00000415772 LHX5Q9H2C1 402 aa16.29■□□□□ 0.2
SBDSP1-201ENST00000415772 LRRC4Q9HBW1 653 aa16.29■□□□□ 0.2
SBDSP1-201ENST00000415772 CISHQ9NSE2 258 aa16.29■□□□□ 0.2
SBDSP1-201ENST00000415772 PCOLCE2Q9UKZ9 415 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms