RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 ZBTB8OSQ8IWT0 167 aa10.21□□□□□ -0.78
SS18-203ENST00000415083 ULK2Q8IYT8 1036 aa10.21□□□□□ -0.78
SS18-203ENST00000415083 FBXO41Q8TF61 875 aa10.21□□□□□ -0.78
SS18-203ENST00000415083 EBNA1BP2Q99848 306 aaKnown RBP10.21□□□□□ -0.78
SS18-203ENST00000415083 BARX2Q9UMQ3 279 aaPredicted RBP10.21□□□□□ -0.78
SS18-203ENST00000415083 PPP1R12AO14974 1030 aaPredicted RBP10.2□□□□□ -0.78
SS18-203ENST00000415083 MAGEC1O60732 1142 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 C6orf222P0C671 652 aaPredicted RBP10.2□□□□□ -0.78
SS18-203ENST00000415083 TGFB3P10600 412 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 ESRRAP11474 423 aaPredicted RBP10.2□□□□□ -0.78
SS18-203ENST00000415083 CYP2F1P24903 491 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 IRX4P78413 519 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 KDSRQ06136 332 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 PDE1CQ14123 709 aaPredicted RBP10.2□□□□□ -0.78
SS18-203ENST00000415083 PCLAFQ15004 111 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 PPM1JQ5JR12 505 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 TMEM110Q86TL2 294 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 NCAPG2Q86XI2 1143 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 MCUQ8NE86 351 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 SPDYE1Q8NFV5 336 aaPredicted RBP10.2□□□□□ -0.78
SS18-203ENST00000415083 OR6Y1Q8NGX8 325 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 CENPIQ92674 756 aaPredicted RBP10.2□□□□□ -0.78
SS18-203ENST00000415083 FAM49BQ9NUQ9 324 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 WDR27A2RRH5 827 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 HNRNPCL1O60812 293 aaKnown RBP10.2□□□□□ -0.78
SS18-203ENST00000415083 GCATO75600 419 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 ALDH1A2O94788 518 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 IL18RAPO95256 599 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 PGM1P36871 562 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 PHKA2P46019 1235 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 ALDH18A1P54886 795 aaKnown RBP10.2□□□□□ -0.78
SS18-203ENST00000415083 LBRQ14739 615 aaKnown RBP10.2□□□□□ -0.78
SS18-203ENST00000415083 FAM187BQ17R55 369 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 FAM47CQ5HY64 1035 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 ZNF618Q5T7W0 954 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 VWA5B1Q5TIE3 1220 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 STEAP4Q687X5 459 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 SCYL2Q6P3W7 929 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 ACOT1Q86TX2 421 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 SPNS2Q8IVW8 549 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 NDUFAF2Q8N183 169 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 STKLD1Q8NE28 680 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 OLFM3Q96PB7 478 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 DDX50Q9BQ39 737 aaKnown RBP10.2□□□□□ -0.78
SS18-203ENST00000415083 CEP41Q9BYV8 373 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 DDX43Q9NXZ2 648 aaKnown RBP10.2□□□□□ -0.78
SS18-203ENST00000415083 DTLQ9NZJ0 730 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 RBPJLQ9UBG7 517 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 PCDHA11Q9Y5I1 949 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 I6L893 689 aaPredicted RBP10.2□□□□□ -0.78
SS18-203ENST00000415083 TRDMT1O14717 391 aaKnown RBP10.2□□□□□ -0.78
SS18-203ENST00000415083 NDC80O14777 642 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 APOL1O14791 398 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 DGKIO75912 1065 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 TM7SF2O76062 418 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 TGM2P21980 687 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 TMPRSS15P98073 1019 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 SATB1Q01826 763 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 RAPH1Q70E73 1250 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 ACVR1CQ8NER5 493 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 PPP1R13LQ8WUF5 828 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 SPATA33Q96N06 139 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 NFKBIZQ9BYH8 718 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 MAF1Q9H063 256 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 C2orf40Q9H1Z8 148 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 NGRNQ9NPE2 291 aaKnown RBP10.2□□□□□ -0.78
SS18-203ENST00000415083 ANLNQ9NQW6 1124 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 DLGAP2Q9P1A6 1054 aa10.2□□□□□ -0.78
SS18-203ENST00000415083 NPTXRO95502 500 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 PGGT1BP53609 377 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 BCAR1P56945 870 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 ACTR3P61158 418 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 RPL10AP62906 217 aaKnown RBP10.19□□□□□ -0.78
SS18-203ENST00000415083 IGBP1P78318 339 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 SLC25A3Q00325 362 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 MSLNQ13421 630 aaPredicted RBP10.19□□□□□ -0.78
SS18-203ENST00000415083 ITGA7Q13683 1181 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 SEPT7Q16181 437 aaKnown RBP10.19□□□□□ -0.78
SS18-203ENST00000415083 MARCH8Q5T0T0 291 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 KCNT2Q6UVM3 1135 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 TIFABQ6ZNK6 161 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 EFCAB3Q8N7B9 438 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 TEKT4Q8WW24 435 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 FAM161BQ96MY7 647 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 LGMNQ99538 433 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 PNPOQ9NVS9 261 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 PPARGC1AQ9UBK2 798 aaKnown RBP10.19□□□□□ -0.78
SS18-203ENST00000415083 MDM4O15151 490 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 PRPSAP2O60256 369 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 TSPAN1O60635 241 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 INSRRP14616 1297 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 ANPEPP15144 967 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 KCNA4P22459 653 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 SLC6A3Q01959 620 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 RCN2Q14257 317 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 DPYSL2Q16555 572 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 DALRD3Q5D0E6 543 aaKnown RBP10.19□□□□□ -0.78
SS18-203ENST00000415083 PPP6R3Q5H9R7 873 aaPredicted RBP10.19□□□□□ -0.78
SS18-203ENST00000415083 DPY19L2Q6NUT2 758 aa10.19□□□□□ -0.78
SS18-203ENST00000415083 CCNJLQ8IV13 435 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms