RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 TRIM27P14373 513 aa4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 RBL1P28749 1068 aa4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 NTSR1P30989 418 aa4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 PTGER1P34995 402 aa4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 CASP5P51878 434 aa4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 RRP1P56182 461 aaKnown RBP4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 KRTAP10-11P60412 298 aa4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 DEUP1Q05D60 604 aa4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 ACOX1Q15067 660 aa4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 SAFBQ15424 915 aaKnown RBP eCLIP4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 GLIPR1L2Q4G1C9 344 aa4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 COBLL1Q53SF7 1204 aa4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 USP17L6PQ6QN14 398 aa4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 DCDC5Q6ZRR9 648 aa4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 BEND5Q7L4P6 421 aa4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 CREBRFQ8IUR6 639 aa4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 NGEFQ8N5V2 710 aa4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 RNF152Q8N8N0 203 aa4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 FAM71DQ8N9W8 422 aa4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 C1orf131Q8NDD1 294 aaKnown RBP4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 MAFAQ8NHW3 353 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 SUN3Q8TAQ9 357 aa4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 DENND1AQ8TEH3 1009 aa4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 ABHD5Q8WTS1 349 aa4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 ARPC5LQ9BPX5 153 aa4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 HEYLQ9NQ87 328 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 PDGFCQ9NRA1 345 aa4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 RXFP3Q9NSD7 469 aa4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 TUBA8Q9NY65 449 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 SCINQ9Y6U3 715 aa4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 FHOD3Q2V2M9 1422 aa4.26□□□□□ -1.73
HMGB3P23-201ENST00000414981 KCNU1A8MYU2 1149 aa4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 IFRD1O00458 451 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 PPEF2O14830 753 aa4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 TP73O15350 636 aa4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 COQ9O75208 318 aa4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 SLC5A1P13866 664 aa4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 ATP5F1P24539 256 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 CALRP27797 417 aaKnown RBP4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 ATICP31939 592 aa4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 HTR7P34969 479 aa4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 MMP13P45452 471 aa4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 DGKQP52824 942 aa4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 GPC5P78333 572 aa4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 POU5F1Q01860 360 aaKnown RBP4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 KRTAP1-1Q07627 177 aa4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 MTAPQ13126 283 aa4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 DNASE1L3Q13609 305 aa4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 UBE2Q1Q7Z7E8 422 aa4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 KRT73Q86Y46 540 aa4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 FSTL5Q8N475 847 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 SVIPQ8NHG7 77 aa4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 PRSS3P2Q8NHM4 247 aa4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 PIGOQ8TEQ8 1089 aa4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 HS6ST2Q96MM7 605 aa4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 NEUROD6Q96NK8 337 aa4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 MPHOSPH6Q99547 160 aaKnown RBP4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 EFHD1Q9BUP0 239 aa4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 CINPQ9BW66 212 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 EIF2AQ9BY44 585 aaKnown RBP4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 SLC25A32Q9H2D1 315 aa4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 TMOD4Q9NZQ9 345 aa4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 MYO1AQ9UBC5 1043 aa4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 ASAP1Q9ULH1 1129 aa4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 CORO2BQ9UQ03 480 aa4.25□□□□□ -1.73
HMGB3P23-201ENST00000414981 POM121BA6NF01 834 aa4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 TTC36A6NLP5 189 aa4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 E5RJQ4 531 aa4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 DHX16O60231 1041 aaKnown RBP4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 CCNT2O60583 730 aaKnown RBP4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 WDR47O94967 919 aa4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 TOP3BO95985 862 aaKnown RBP4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 FGFR2P21802 821 aa4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 GHRHRQ02643 423 aa4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 POU5F1BQ06416 359 aa4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 KLF9Q13886 244 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 KCNJ12Q14500 433 aa4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 ZNF268Q14587 947 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 KCNB1Q14721 858 aa4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 MFSD13AQ14CX5 517 aa4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 SYCP2LQ5T4T6 812 aa4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 RRAGBQ5VZM2 374 aa4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 CCSAPQ6IQ19 270 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 TLDC1Q6P9B6 456 aa4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 SLC2A7Q6PXP3 512 aa4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 KIAA0408Q6ZU52 694 aa4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 CENPQQ7L2Z9 268 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 DPP9Q86TI2 863 aa4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 C16orf71Q8IYS4 520 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 Q8N9P0 234 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 CCDC150Q8NCX0 1101 aa4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 BRI3BPQ8WY22 251 aa4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 MAP4K1Q92918 833 aa4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 HIC2Q96JB3 615 aa4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 TSPAN18Q96SJ8 248 aa4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 MAGEB5Q9BZ81 275 aa4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 USP29Q9HBJ7 922 aa4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 STARD7Q9NQZ5 370 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms