RNA–Protein interactions for RNA: ENST00000414306.5

SBDS-202, Transcript of SBDS, ribosome maturation factor, humanhuman

TSL 5

Gene SBDS, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-202ENST00000414306 SPA17Q15506 151 aa18.44■□□□□ 0.54
SBDS-202ENST00000414306 SLC25A52Q3SY17 297 aa18.44■□□□□ 0.54
SBDS-202ENST00000414306 CCDC14Q49A88 953 aa18.44■□□□□ 0.54
SBDS-202ENST00000414306 ZC3H12AQ5D1E8 599 aaKnown RBP18.44■□□□□ 0.54
SBDS-202ENST00000414306 ACRBPQ8NEB7 543 aa18.44■□□□□ 0.54
SBDS-202ENST00000414306 PLD4Q96BZ4 506 aa18.44■□□□□ 0.54
SBDS-202ENST00000414306 BTBD6Q96KE9 485 aa18.44■□□□□ 0.54
SBDS-202ENST00000414306 FCRL2Q96LA5 508 aaPredicted RBP18.44■□□□□ 0.54
SBDS-202ENST00000414306 DESI2Q9BSY9 194 aa18.44■□□□□ 0.54
SBDS-202ENST00000414306 NUP85Q9BW27 656 aa18.44■□□□□ 0.54
SBDS-202ENST00000414306 PIGVQ9NUD9 493 aa18.44■□□□□ 0.54
SBDS-202ENST00000414306 SORCS3Q9UPU3 1222 aa18.44■□□□□ 0.54
SBDS-202ENST00000414306 TLR6Q9Y2C9 796 aa18.44■□□□□ 0.54
SBDS-202ENST00000414306 HBS1LQ9Y450 684 aaKnown RBP18.44■□□□□ 0.54
SBDS-202ENST00000414306 EPN1Q9Y6I3 576 aaPredicted RBP18.44■□□□□ 0.54
SBDS-202ENST00000414306 SCINQ9Y6U3 715 aa18.44■□□□□ 0.54
SBDS-202ENST00000414306 E2F8A0AVK6 867 aa18.44■□□□□ 0.54
SBDS-202ENST00000414306 GREM1O60565 184 aa18.44■□□□□ 0.54
SBDS-202ENST00000414306 PTMAP06454 111 aaKnown RBP18.44■□□□□ 0.54
SBDS-202ENST00000414306 TCF3P15923 654 aa18.44■□□□□ 0.54
SBDS-202ENST00000414306 MAGEA1P43355 309 aa18.44■□□□□ 0.54
SBDS-202ENST00000414306 VCPP55072 806 aaKnown RBP18.44■□□□□ 0.54
SBDS-202ENST00000414306 DEUP1Q05D60 604 aa18.44■□□□□ 0.54
SBDS-202ENST00000414306 OSCP1Q8WVF1 389 aa18.44■□□□□ 0.54
SBDS-202ENST00000414306 GTSE1Q9NYZ3 720 aa18.44■□□□□ 0.54
SBDS-202ENST00000414306 COL4A2P08572 1712 aa18.43■□□□□ 0.54
SBDS-202ENST00000414306 EIF3CLB5ME19 914 aaKnown RBP18.43■□□□□ 0.54
SBDS-202ENST00000414306 CCP110O43303 1012 aa18.43■□□□□ 0.54
SBDS-202ENST00000414306 CYP1A2P05177 515 aa18.43■□□□□ 0.54
SBDS-202ENST00000414306 GBP1P32455 592 aa18.43■□□□□ 0.54
SBDS-202ENST00000414306 HARS2P49590 506 aaKnown RBP18.43■□□□□ 0.54
SBDS-202ENST00000414306 ARHGAP29Q52LW3 1261 aa18.43■□□□□ 0.54
SBDS-202ENST00000414306 LRRC8AQ8IWT6 810 aa18.43■□□□□ 0.54
SBDS-202ENST00000414306 FAM172AQ8WUF8 416 aa18.43■□□□□ 0.54
SBDS-202ENST00000414306 EIF3CQ99613 913 aaKnown RBP18.43■□□□□ 0.54
SBDS-202ENST00000414306 MRPL47Q9HD33 250 aaKnown RBP18.43■□□□□ 0.54
SBDS-202ENST00000414306 CTTNBP2NLQ9P2B4 639 aa18.43■□□□□ 0.54
SBDS-202ENST00000414306 XPO7Q9UIA9 1087 aaKnown RBP18.43■□□□□ 0.54
SBDS-202ENST00000414306 AGO1Q9UL18 857 aaKnown RBP18.43■□□□□ 0.54
SBDS-202ENST00000414306 PCDHA13Q9Y5I0 950 aa18.43■□□□□ 0.54
SBDS-202ENST00000414306 MIA3Q5JRA6 1907 aa18.42■□□□□ 0.54
SBDS-202ENST00000414306 TMEM191CA6NGB0 347 aa18.42■□□□□ 0.54
SBDS-202ENST00000414306 CHADO15335 359 aa18.42■□□□□ 0.54
SBDS-202ENST00000414306 IPO7O95373 1038 aaKnown RBP18.42■□□□□ 0.54
SBDS-202ENST00000414306 IGLV3-27P01718 113 aa18.42■□□□□ 0.54
SBDS-202ENST00000414306 TMEM253P0C7T8 217 aa18.42■□□□□ 0.54
SBDS-202ENST00000414306 SRFP11831 508 aa18.42■□□□□ 0.54
SBDS-202ENST00000414306 PSMA2P25787 234 aa18.42■□□□□ 0.54
SBDS-202ENST00000414306 KPNA1P52294 538 aaPredicted RBP18.42■□□□□ 0.54
SBDS-202ENST00000414306 ZNF252P-AS1Q0IIN9 211 aa18.42■□□□□ 0.54
SBDS-202ENST00000414306 IER5LQ5T953 404 aa18.42■□□□□ 0.54
SBDS-202ENST00000414306 DAB2IPQ5VWQ8 1189 aa18.42■□□□□ 0.54
SBDS-202ENST00000414306 HTR3DQ70Z44 454 aa18.42■□□□□ 0.54
SBDS-202ENST00000414306 ARCQ7LC44 396 aa18.42■□□□□ 0.54
SBDS-202ENST00000414306 FAM131BQ86XD5 332 aa18.42■□□□□ 0.54
SBDS-202ENST00000414306 BHMTQ93088 406 aa18.42■□□□□ 0.54
SBDS-202ENST00000414306 NT5C3BQ969T7 300 aa18.42■□□□□ 0.54
SBDS-202ENST00000414306 FAM83CQ9BQN1 747 aa18.42■□□□□ 0.54
SBDS-202ENST00000414306 OSGEPQ9NPF4 335 aa18.42■□□□□ 0.54
SBDS-202ENST00000414306 HPS4Q9NQG7 708 aa18.42■□□□□ 0.54
SBDS-202ENST00000414306 TMPRSS4Q9NRS4 437 aa18.42■□□□□ 0.54
SBDS-202ENST00000414306 RRN3Q9NYV6 651 aa18.42■□□□□ 0.54
SBDS-202ENST00000414306 ANAPC7Q9UJX3 599 aa18.42■□□□□ 0.54
SBDS-202ENST00000414306 DUSP12Q9UNI6 340 aa18.42■□□□□ 0.54
SBDS-202ENST00000414306 REXO2Q9Y3B8 237 aaKnown RBP18.42■□□□□ 0.54
SBDS-202ENST00000414306 GOLGA6L7A0A1B0GV03 622 aa18.41■□□□□ 0.54
SBDS-202ENST00000414306 OTOL1A6NHN0 477 aaPredicted RBP18.41■□□□□ 0.54
SBDS-202ENST00000414306 TRDMT1O14717 391 aaKnown RBP18.41■□□□□ 0.54
SBDS-202ENST00000414306 LCA5LO95447 670 aa18.41■□□□□ 0.54
SBDS-202ENST00000414306 APOEP02649 317 aa18.41■□□□□ 0.54
SBDS-202ENST00000414306 RDXP35241 583 aaKnown RBP18.41■□□□□ 0.54
SBDS-202ENST00000414306 GGCXP38435 758 aa18.41■□□□□ 0.54
SBDS-202ENST00000414306 SOX9P48436 509 aa18.41■□□□□ 0.54
SBDS-202ENST00000414306 ZNF143P52747 638 aaPredicted RBP18.41■□□□□ 0.54
SBDS-202ENST00000414306 EML3Q32P44 896 aa18.41■□□□□ 0.54
SBDS-202ENST00000414306 NUGGCQ68CJ6 796 aa18.41■□□□□ 0.54
SBDS-202ENST00000414306 Q6ZNB5 142 aa18.41■□□□□ 0.54
SBDS-202ENST00000414306 SND1Q7KZF4 910 aaKnown RBP eCLIP18.41■□□□□ 0.54
SBDS-202ENST00000414306 ZNF564Q8TBZ8 553 aaPredicted RBP18.41■□□□□ 0.54
SBDS-202ENST00000414306 IRF7Q92985 503 aa18.41■□□□□ 0.54
SBDS-202ENST00000414306 SLC39A13Q96H72 371 aa18.41■□□□□ 0.54
SBDS-202ENST00000414306 CA14Q9ULX7 337 aa18.41■□□□□ 0.54
SBDS-202ENST00000414306 ARNTLO00327 626 aa18.4■□□□□ 0.54
SBDS-202ENST00000414306 CCR1P32246 355 aa18.4■□□□□ 0.54
SBDS-202ENST00000414306 PTPN9P43378 593 aa18.4■□□□□ 0.54
SBDS-202ENST00000414306 RING1Q06587 406 aa18.4■□□□□ 0.54
SBDS-202ENST00000414306 NNTQ13423 1086 aa18.4■□□□□ 0.54
SBDS-202ENST00000414306 EIF4EBP2Q13542 120 aaPredicted RBP18.4■□□□□ 0.54
SBDS-202ENST00000414306 TPGS1Q6ZTW0 290 aa18.4■□□□□ 0.54
SBDS-202ENST00000414306 CSGALNACT1Q8TDX6 532 aa18.4■□□□□ 0.54
SBDS-202ENST00000414306 ATP2A3Q93084 1043 aa18.4■□□□□ 0.54
SBDS-202ENST00000414306 PDLIM2Q96JY6 352 aa18.4■□□□□ 0.54
SBDS-202ENST00000414306 ZNF830Q96NB3 372 aaPredicted RBP18.4■□□□□ 0.54
SBDS-202ENST00000414306 CNPY3Q9BT09 278 aa18.4■□□□□ 0.54
SBDS-202ENST00000414306 DCLK3Q9C098 648 aa18.4■□□□□ 0.54
SBDS-202ENST00000414306 ANLNQ9NQW6 1124 aa18.4■□□□□ 0.54
SBDS-202ENST00000414306 HEBP1Q9NRV9 189 aa18.4■□□□□ 0.54
SBDS-202ENST00000414306 TMEM110-MUSTN1A8MSY1 372 aa18.39■□□□□ 0.54
SBDS-202ENST00000414306 SLC9A3R1O14745 358 aaPredicted RBP18.39■□□□□ 0.54
SBDS-202ENST00000414306 TSPAN3O60637 253 aa18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms