RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 TNFRSF4P43489 277 aa15.32■□□□□ 0.04
CHD1-202ENST00000414220 NSFP46459 744 aaKnown RBP15.32■□□□□ 0.04
CHD1-202ENST00000414220 CSTF1Q05048 431 aaKnown RBP15.32■□□□□ 0.04
CHD1-202ENST00000414220 TCF15Q12870 199 aa15.32■□□□□ 0.04
CHD1-202ENST00000414220 PTPN20Q4JDL3 420 aa15.32■□□□□ 0.04
CHD1-202ENST00000414220 ADGRF1Q5T601 910 aa15.32■□□□□ 0.04
CHD1-202ENST00000414220 NAA35Q5VZE5 725 aa15.32■□□□□ 0.04
CHD1-202ENST00000414220 FAM183BPQ6ZVS7 135 aa15.32■□□□□ 0.04
CHD1-202ENST00000414220 SLC26A9Q7LBE3 791 aa15.32■□□□□ 0.04
CHD1-202ENST00000414220 NAT16Q8N8M0 369 aa15.32■□□□□ 0.04
CHD1-202ENST00000414220 ZNF557Q8N988 423 aaPredicted RBP15.32■□□□□ 0.04
CHD1-202ENST00000414220 DDI1Q8WTU0 396 aa15.32■□□□□ 0.04
CHD1-202ENST00000414220 RNF34Q969K3 372 aa15.32■□□□□ 0.04
CHD1-202ENST00000414220 NAP1L5Q96NT1 182 aaPredicted RBP15.32■□□□□ 0.04
CHD1-202ENST00000414220 FAM204AQ9H8W3 233 aa15.32■□□□□ 0.04
CHD1-202ENST00000414220 RBM12Q9NTZ6 932 aaKnown RBP15.32■□□□□ 0.04
CHD1-202ENST00000414220 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.32■□□□□ 0.04
CHD1-202ENST00000414220 SLC8A2Q9UPR5 921 aa15.32■□□□□ 0.04
CHD1-202ENST00000414220 PAXBP1Q9Y5B6 917 aa15.32■□□□□ 0.04
CHD1-202ENST00000414220 HELZP42694 1942 aaKnown RBP15.31■□□□□ 0.04
CHD1-202ENST00000414220 IRAK2O43187 625 aa15.31■□□□□ 0.04
CHD1-202ENST00000414220 MSI1O43347 362 aaKnown RBP15.31■□□□□ 0.04
CHD1-202ENST00000414220 RNF40O75150 1001 aa15.31■□□□□ 0.04
CHD1-202ENST00000414220 TULP3O75386 442 aa15.31■□□□□ 0.04
CHD1-202ENST00000414220 TRUB2O95900 331 aaKnown RBP15.31■□□□□ 0.04
CHD1-202ENST00000414220 KLKB1P03952 638 aa15.31■□□□□ 0.04
CHD1-202ENST00000414220 ERBB2P04626 1255 aa15.31■□□□□ 0.04
CHD1-202ENST00000414220 NOS2P35228 1153 aa15.31■□□□□ 0.04
CHD1-202ENST00000414220 GABRB2P47870 512 aa15.31■□□□□ 0.04
CHD1-202ENST00000414220 SLC6A11P48066 632 aa15.31■□□□□ 0.04
CHD1-202ENST00000414220 NOMO3P69849 1222 aa15.31■□□□□ 0.04
CHD1-202ENST00000414220 MRPS21P82921 87 aaKnown RBP15.31■□□□□ 0.04
CHD1-202ENST00000414220 ASIC2Q16515 512 aa15.31■□□□□ 0.04
CHD1-202ENST00000414220 HSF5Q4G112 596 aaPredicted RBP15.31■□□□□ 0.04
CHD1-202ENST00000414220 FIGNQ5HY92 759 aa15.31■□□□□ 0.04
CHD1-202ENST00000414220 SFMBT2Q5VUG0 894 aa15.31■□□□□ 0.04
CHD1-202ENST00000414220 SND1Q7KZF4 910 aaKnown RBP eCLIP15.31■□□□□ 0.04
CHD1-202ENST00000414220 TRMT11Q7Z4G4 463 aaKnown RBP15.31■□□□□ 0.04
CHD1-202ENST00000414220 DEFB106AQ8N104 65 aa15.31■□□□□ 0.04
CHD1-202ENST00000414220 ATP6V0D2Q8N8Y2 350 aa15.31■□□□□ 0.04
CHD1-202ENST00000414220 KCNV2Q8TDN2 545 aa15.31■□□□□ 0.04
CHD1-202ENST00000414220 CPA5Q8WXQ8 436 aa15.31■□□□□ 0.04
CHD1-202ENST00000414220 TMA16Q96EY4 203 aaKnown RBP15.31■□□□□ 0.04
CHD1-202ENST00000414220 AGPAT1Q99943 283 aa15.31■□□□□ 0.04
CHD1-202ENST00000414220 DNAJC17Q9NVM6 304 aaKnown RBP15.31■□□□□ 0.04
CHD1-202ENST00000414220 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.31■□□□□ 0.04
CHD1-202ENST00000414220 NOCTQ9UK39 431 aaKnown RBP15.31■□□□□ 0.04
CHD1-202ENST00000414220 F5P12259 2224 aa15.31■□□□□ 0.04
CHD1-202ENST00000414220 A0A0A0MRY4 1105 aa15.3■□□□□ 0.04
CHD1-202ENST00000414220 CHURC1-FNTBB4DL54 471 aa15.3■□□□□ 0.04
CHD1-202ENST00000414220 CACNG3O60359 315 aa15.3■□□□□ 0.04
CHD1-202ENST00000414220 ACSL4O60488 711 aa15.3■□□□□ 0.04
CHD1-202ENST00000414220 DAB1O75553 588 aa15.3■□□□□ 0.04
CHD1-202ENST00000414220 F9P00740 461 aa15.3■□□□□ 0.04
CHD1-202ENST00000414220 CYP1A1P04798 512 aaPredicted RBP15.3■□□□□ 0.04
CHD1-202ENST00000414220 FYNP06241 537 aa15.3■□□□□ 0.04
CHD1-202ENST00000414220 COL4A2P08572 1712 aa15.3■□□□□ 0.04
CHD1-202ENST00000414220 SP9P0CG40 484 aa15.3■□□□□ 0.04
CHD1-202ENST00000414220 ABCB4P21439 1286 aa15.3■□□□□ 0.04
CHD1-202ENST00000414220 TNFAIP3P21580 790 aa15.3■□□□□ 0.04
CHD1-202ENST00000414220 CCR1P32246 355 aa15.3■□□□□ 0.04
CHD1-202ENST00000414220 DGKGP49619 791 aa15.3■□□□□ 0.04
CHD1-202ENST00000414220 RNASE9P60153 205 aaKnown RBP15.3■□□□□ 0.04
CHD1-202ENST00000414220 NHLH1Q02575 133 aa15.3■□□□□ 0.04
CHD1-202ENST00000414220 FAM102AQ5T9C2 384 aaPredicted RBP15.3■□□□□ 0.04
CHD1-202ENST00000414220 SYPL2Q5VXT5 272 aa15.3■□□□□ 0.04
CHD1-202ENST00000414220 SDE2Q6IQ49 451 aa15.3■□□□□ 0.04
CHD1-202ENST00000414220 OLFML1Q6UWY5 402 aa15.3■□□□□ 0.04
CHD1-202ENST00000414220 SLC20A1Q8WUM9 679 aa15.3■□□□□ 0.04
CHD1-202ENST00000414220 ATRIPQ8WXE1 791 aa15.3■□□□□ 0.04
CHD1-202ENST00000414220 SLC2A13Q96QE2 648 aa15.3■□□□□ 0.04
CHD1-202ENST00000414220 SLC2A11Q9BYW1 496 aa15.3■□□□□ 0.04
CHD1-202ENST00000414220 SEMA4AQ9H3S1 761 aa15.3■□□□□ 0.04
CHD1-202ENST00000414220 FBRSL1Q9HCM7 1045 aaKnown RBP15.3■□□□□ 0.04
CHD1-202ENST00000414220 STOML2Q9UJZ1 356 aa15.3■□□□□ 0.04
CHD1-202ENST00000414220 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.3■□□□□ 0.042e-10■■■□□ 15.7
CHD1-202ENST00000414220 MIA3Q5JRA6 1907 aa15.29■□□□□ 0.04
CHD1-202ENST00000414220 KMT2EQ8IZD2 1858 aa15.29■□□□□ 0.04
CHD1-202ENST00000414220 KIF26AQ9ULI4 1882 aaPredicted RBP15.29■□□□□ 0.04
CHD1-202ENST00000414220 ZBTB24O43167 697 aaPredicted RBP15.29■□□□□ 0.04
CHD1-202ENST00000414220 GRAP2O75791 330 aa15.29■□□□□ 0.04
CHD1-202ENST00000414220 PAPSS2O95340 614 aaPredicted RBP15.29■□□□□ 0.04
CHD1-202ENST00000414220 IGLV3-27P01718 113 aa15.29■□□□□ 0.04
CHD1-202ENST00000414220 CALB1P05937 261 aa15.29■□□□□ 0.04
CHD1-202ENST00000414220 DESP17661 470 aa15.29■□□□□ 0.04
CHD1-202ENST00000414220 MATKP42679 507 aa15.29■□□□□ 0.04
CHD1-202ENST00000414220 FMO1Q01740 532 aa15.29■□□□□ 0.04
CHD1-202ENST00000414220 KDSRQ06136 332 aa15.29■□□□□ 0.04
CHD1-202ENST00000414220 Q6ZS52 159 aa15.29■□□□□ 0.04
CHD1-202ENST00000414220 TAC4Q86UU9 113 aa15.29■□□□□ 0.04
CHD1-202ENST00000414220 ETFBKMTQ8IXQ9 262 aa15.29■□□□□ 0.04
CHD1-202ENST00000414220 FAM217AQ8IXS0 508 aa15.29■□□□□ 0.04
CHD1-202ENST00000414220 RPLP0P6Q8NHW5 317 aa15.29■□□□□ 0.04
CHD1-202ENST00000414220 ADAM32Q8TC27 787 aa15.29■□□□□ 0.04
CHD1-202ENST00000414220 UCMAQ8WVF2 138 aa15.29■□□□□ 0.04
CHD1-202ENST00000414220 BHMTQ93088 406 aa15.29■□□□□ 0.04
CHD1-202ENST00000414220 BTN2A3PQ96KV6 586 aa15.29■□□□□ 0.04
CHD1-202ENST00000414220 PRMT8Q9NR22 394 aaPredicted RBP15.29■□□□□ 0.04
CHD1-202ENST00000414220 DDIT4Q9NX09 232 aa15.29■□□□□ 0.04
CHD1-202ENST00000414220 ZSCAN32Q9NX65 697 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms