RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 RALAP11233 206 aa17.85■□□□□ 0.45
PTPRC-206ENST00000413409 KRT3P12035 628 aa17.85■□□□□ 0.45
PTPRC-206ENST00000413409 HSD17B3P37058 310 aa17.85■□□□□ 0.45
PTPRC-206ENST00000413409 RPS9P46781 194 aaKnown RBP17.85■□□□□ 0.45
PTPRC-206ENST00000413409 PTK6Q13882 451 aa17.85■□□□□ 0.45
PTPRC-206ENST00000413409 CCNG2Q16589 344 aa17.85■□□□□ 0.45
PTPRC-206ENST00000413409 ZDHHC24Q6UX98 284 aa17.85■□□□□ 0.45
PTPRC-206ENST00000413409 RSPO2Q6UXX9 243 aaPredicted RBP17.85■□□□□ 0.45
PTPRC-206ENST00000413409 CCDC50Q8IVM0 306 aa17.85■□□□□ 0.45
PTPRC-206ENST00000413409 RNF168Q8IYW5 571 aaPredicted RBP17.85■□□□□ 0.45
PTPRC-206ENST00000413409 HEXIM2Q96MH2 286 aaKnown RBP17.85■□□□□ 0.45
PTPRC-206ENST00000413409 SLITRK1Q96PX8 696 aa17.85■□□□□ 0.45
PTPRC-206ENST00000413409 FAM126AQ9BYI3 521 aaPredicted RBP17.85■□□□□ 0.45
PTPRC-206ENST00000413409 RNF39Q9H2S5 420 aa17.85■□□□□ 0.45
PTPRC-206ENST00000413409 SYNCQ9H7C4 482 aa17.85■□□□□ 0.45
PTPRC-206ENST00000413409 FAM204AQ9H8W3 233 aa17.85■□□□□ 0.45
PTPRC-206ENST00000413409 FAM105AQ9NUU6 356 aa17.85■□□□□ 0.45
PTPRC-206ENST00000413409 STK39Q9UEW8 545 aa17.85■□□□□ 0.45
PTPRC-206ENST00000413409 MTRF1LQ9UGC7 380 aaKnown RBP17.85■□□□□ 0.45
PTPRC-206ENST00000413409 DPP7Q9UHL4 492 aa17.85■□□□□ 0.45
PTPRC-206ENST00000413409 ADAM21Q9UKJ8 722 aa17.85■□□□□ 0.45
PTPRC-206ENST00000413409 NBEAQ8NFP9 2946 aa17.84■□□□□ 0.45
PTPRC-206ENST00000413409 TRIP11Q15643 1979 aa17.84■□□□□ 0.45
PTPRC-206ENST00000413409 PIRO00625 290 aa17.84■□□□□ 0.45
PTPRC-206ENST00000413409 TGM5O43548 720 aa17.84■□□□□ 0.45
PTPRC-206ENST00000413409 LRP3O75074 770 aa17.84■□□□□ 0.45
PTPRC-206ENST00000413409 ZNF623O75123 536 aa17.84■□□□□ 0.45
PTPRC-206ENST00000413409 GAS8O95995 478 aa17.84■□□□□ 0.45
PTPRC-206ENST00000413409 FSHRP23945 695 aa17.84■□□□□ 0.45
PTPRC-206ENST00000413409 PSMA2P25787 234 aa17.84■□□□□ 0.45
PTPRC-206ENST00000413409 RPL21P46778 160 aaKnown RBP17.84■□□□□ 0.45
PTPRC-206ENST00000413409 NTHL1P78549 312 aa17.84■□□□□ 0.45
PTPRC-206ENST00000413409 ORC1Q13415 861 aa17.84■□□□□ 0.45
PTPRC-206ENST00000413409 UAP1Q16222 522 aaPredicted RBP17.84■□□□□ 0.45
PTPRC-206ENST00000413409 CSRP2Q16527 193 aa17.84■□□□□ 0.45
PTPRC-206ENST00000413409 ARHGAP17Q68EM7 881 aa17.84■□□□□ 0.45
PTPRC-206ENST00000413409 TWF2Q6IBS0 349 aaKnown RBP17.84■□□□□ 0.45
PTPRC-206ENST00000413409 DRICH1Q6PGQ1 229 aaPredicted RBP17.84■□□□□ 0.45
PTPRC-206ENST00000413409 LILRA6Q6PI73 481 aa17.84■□□□□ 0.45
PTPRC-206ENST00000413409 AGMOQ6ZNB7 445 aa17.84■□□□□ 0.45
PTPRC-206ENST00000413409 CELF5Q8N6W0 485 aaKnown RBP17.84■□□□□ 0.45
PTPRC-206ENST00000413409 C18orf25Q96B23 403 aaPredicted RBP17.84■□□□□ 0.45
PTPRC-206ENST00000413409 HERPUD2Q9BSE4 406 aa17.84■□□□□ 0.45
PTPRC-206ENST00000413409 TRIM31Q9BZY9 425 aa17.84■□□□□ 0.45
PTPRC-206ENST00000413409 GDAP2Q9NXN4 497 aa17.84■□□□□ 0.45
PTPRC-206ENST00000413409 WHRNQ9P202 907 aa17.84■□□□□ 0.45
PTPRC-206ENST00000413409 TSPAN16Q9UKR8 245 aa17.84■□□□□ 0.45
PTPRC-206ENST00000413409 CDH7Q9ULB5 785 aa17.84■□□□□ 0.45
PTPRC-206ENST00000413409 RAB23Q9ULC3 237 aa17.84■□□□□ 0.45
PTPRC-206ENST00000413409 EFR3BQ9Y2G0 817 aa17.84■□□□□ 0.45
PTPRC-206ENST00000413409 SNX9Q9Y5X1 595 aa17.84■□□□□ 0.45
PTPRC-206ENST00000413409 ZFP37Q9Y6Q3 630 aaPredicted RBP17.84■□□□□ 0.45
PTPRC-206ENST00000413409 DSPP15924 2871 aaKnown RBP17.84■□□□□ 0.45
PTPRC-206ENST00000413409 SMIM28A0A1B0GU29 152 aa17.83■□□□□ 0.44
PTPRC-206ENST00000413409 GOLGA6CA6NDK9 693 aa17.83■□□□□ 0.44
PTPRC-206ENST00000413409 F8W810 466 aa17.83■□□□□ 0.44
PTPRC-206ENST00000413409 GOLGA8SH3BPF8 625 aa17.83■□□□□ 0.44
PTPRC-206ENST00000413409 PPEF2O14830 753 aa17.83■□□□□ 0.44
PTPRC-206ENST00000413409 TM4SF5O14894 197 aa17.83■□□□□ 0.44
PTPRC-206ENST00000413409 KRT7P08729 469 aa17.83■□□□□ 0.44
PTPRC-206ENST00000413409 GOLGA6DP0CG33 693 aa17.83■□□□□ 0.44
PTPRC-206ENST00000413409 SCN1AP35498 2009 aa17.83■□□□□ 0.44
PTPRC-206ENST00000413409 SSR1P43307 286 aaKnown RBP17.83■□□□□ 0.44
PTPRC-206ENST00000413409 SLC25A11Q02978 314 aaKnown RBP17.83■□□□□ 0.44
PTPRC-206ENST00000413409 PPP1R7Q15435 360 aa17.83■□□□□ 0.44
PTPRC-206ENST00000413409 GOLGA7BQ2TAP0 167 aa17.83■□□□□ 0.44
PTPRC-206ENST00000413409 SV2CQ496J9 727 aa17.83■□□□□ 0.44
PTPRC-206ENST00000413409 PKDCCQ504Y2 493 aa17.83■□□□□ 0.44
PTPRC-206ENST00000413409 DAB2IPQ5VWQ8 1189 aa17.83■□□□□ 0.44
PTPRC-206ENST00000413409 ELMSAN1Q6PJG2 1045 aa17.83■□□□□ 0.44
PTPRC-206ENST00000413409 SPOCD1Q6ZMY3 1216 aa17.83■□□□□ 0.44
PTPRC-206ENST00000413409 TPRG1Q6ZUI0 275 aa17.83■□□□□ 0.44
PTPRC-206ENST00000413409 LIMS2Q7Z4I7 341 aa17.83■□□□□ 0.44
PTPRC-206ENST00000413409 FAM76AQ8TAV0 307 aa17.83■□□□□ 0.44
PTPRC-206ENST00000413409 C1orf54Q8WWF1 131 aa17.83■□□□□ 0.44
PTPRC-206ENST00000413409 MRPL45Q9BRJ2 306 aaKnown RBP17.83■□□□□ 0.44
PTPRC-206ENST00000413409 TMEM175Q9BSA9 504 aa17.83■□□□□ 0.44
PTPRC-206ENST00000413409 METTL5Q9NRN9 209 aaKnown RBP17.83■□□□□ 0.44
PTPRC-206ENST00000413409 ZDHHC7Q9NXF8 308 aa17.83■□□□□ 0.44
PTPRC-206ENST00000413409 GOLGA6AQ9NYA3 693 aa17.83■□□□□ 0.44
PTPRC-206ENST00000413409 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.83■□□□□ 0.44
PTPRC-206ENST00000413409 ZMIZ1Q9ULJ6 1067 aa17.83■□□□□ 0.44
PTPRC-206ENST00000413409 PLAAQ9Y263 795 aa17.83■□□□□ 0.44
PTPRC-206ENST00000413409 SNX24Q9Y343 169 aa17.83■□□□□ 0.44
PTPRC-206ENST00000413409 HES2Q9Y543 173 aa17.83■□□□□ 0.44
PTPRC-206ENST00000413409 IPPQ9Y573 584 aa17.83■□□□□ 0.44
PTPRC-206ENST00000413409 MTCL1Q9Y4B5 1905 aaKnown RBP17.83■□□□□ 0.44
PTPRC-206ENST00000413409 GCN1Q92616 2671 aaKnown RBP17.82■□□□□ 0.44
PTPRC-206ENST00000413409 C1QTNF9BB2RNN3 333 aa17.82■□□□□ 0.44
PTPRC-206ENST00000413409 F8VP50 259 aa17.82■□□□□ 0.44
PTPRC-206ENST00000413409 TJP3O95049 919 aa17.82■□□□□ 0.44
PTPRC-206ENST00000413409 C1QTNF9P0C862 333 aa17.82■□□□□ 0.44
PTPRC-206ENST00000413409 LRPAP1P30533 357 aa17.82■□□□□ 0.44
PTPRC-206ENST00000413409 RFC1P35251 1148 aaPredicted RBP17.82■□□□□ 0.44
PTPRC-206ENST00000413409 GJC1P36383 396 aa17.82■□□□□ 0.44
PTPRC-206ENST00000413409 GLUD2P49448 558 aa17.82■□□□□ 0.44
PTPRC-206ENST00000413409 SNX16P57768 344 aa17.82■□□□□ 0.44
PTPRC-206ENST00000413409 HADHQ16836 314 aaKnown RBP17.82■□□□□ 0.44
PTPRC-206ENST00000413409 GRASPQ7Z6J2 395 aaPredicted RBP17.82■□□□□ 0.44
PTPRC-206ENST00000413409 HACE1Q8IYU2 909 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms