RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 IFI44Q8TCB0 444 aa6.15□□□□□ -1.42
CBX1P3-201ENST00000413296 TNPO1Q92973 898 aaKnown RBP6.15□□□□□ -1.42
CBX1P3-201ENST00000413296 CMTM3Q96MX0 182 aa6.15□□□□□ -1.42
CBX1P3-201ENST00000413296 RUFY1Q96T51 708 aa6.15□□□□□ -1.42
CBX1P3-201ENST00000413296 TBCDQ9BTW9 1192 aa6.15□□□□□ -1.42
CBX1P3-201ENST00000413296 TUBB2BQ9BVA1 445 aa6.15□□□□□ -1.42
CBX1P3-201ENST00000413296 PACSIN1Q9BY11 444 aa6.15□□□□□ -1.42
CBX1P3-201ENST00000413296 FAM129AQ9BZQ8 928 aa6.15□□□□□ -1.42
CBX1P3-201ENST00000413296 SLC7A5P2Q9GIP4 190 aa6.15□□□□□ -1.42
CBX1P3-201ENST00000413296 NELFAQ9H3P2 528 aa6.15□□□□□ -1.42
CBX1P3-201ENST00000413296 SLC6A20Q9NP91 592 aa6.15□□□□□ -1.42
CBX1P3-201ENST00000413296 MBNL1Q9NR56 388 aaKnown RBP6.15□□□□□ -1.42
CBX1P3-201ENST00000413296 ATAD3AQ9NVI7 634 aa6.15□□□□□ -1.42
CBX1P3-201ENST00000413296 ZSCAN32Q9NX65 697 aa6.15□□□□□ -1.42
CBX1P3-201ENST00000413296 TUBE1Q9UJT0 475 aa6.15□□□□□ -1.42
CBX1P3-201ENST00000413296 SARDHQ9UL12 918 aa6.15□□□□□ -1.42
CBX1P3-201ENST00000413296 GRID1Q9ULK0 1009 aa6.15□□□□□ -1.42
CBX1P3-201ENST00000413296 COA3Q9Y2R0 106 aaPredicted RBP6.15□□□□□ -1.42
CBX1P3-201ENST00000413296 PCDHB6Q9Y5E3 794 aa6.15□□□□□ -1.42
CBX1P3-201ENST00000413296 PCDHGA5Q9Y5G8 931 aa6.15□□□□□ -1.42
CBX1P3-201ENST00000413296 PCDHGA1Q9Y5H4 931 aa6.15□□□□□ -1.42
CBX1P3-201ENST00000413296 FRMD3A2A2Y4 597 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 FAM90A20PA6NIJ5 464 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 LRRIQ4A6NIV6 560 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 OR6C76A6NM76 312 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 HNRNPCL2B2RXH8 293 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 GPR25O00155 361 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 KRIT1O00522 736 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 CA12O43570 354 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 HNRNPCL1O60812 293 aaKnown RBP6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 DIAPH2O60879 1101 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 ADAM11O75078 769 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 RECQL5O94762 991 aaPredicted RBP6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 ABCB1P08183 1280 aaPredicted RBP6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 RHOXF2BP0C7M4 288 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 PRR35P0CG20 571 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 TPBGLP0DKB5 382 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 CDH2P19022 906 aaPredicted RBP6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 FPR2P25090 351 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 ICAM3P32942 547 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 MAGEA4P43358 317 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 DIO1P49895 249 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 GBX2P52951 348 aaPredicted RBP6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 CASP9P55211 416 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 CDH8P55286 799 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 PRAMEP78395 509 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 GABPB1Q06547 395 aaPredicted RBP6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 PDCLQ13371 301 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 CLCA4Q14CN2 919 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 HFEQ30201 348 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 GALNTL6Q49A17 601 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 CRY2Q49AN0 593 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 SLC39A12Q504Y0 691 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 ZNF484Q5JVG2 852 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 COLEC12Q5KU26 742 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 BTBD8Q5XKL5 378 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 MRNIPQ6NTE8 343 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 TTI2Q6NXR4 508 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 CTR9Q6PD62 1173 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 ZCCHC12Q6PEW1 402 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 PTCHD4Q6ZW05 846 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 MARK2Q7KZI7 788 aaKnown RBP6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 MIB1Q86YT6 1006 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 IRF2BP1Q8IU81 584 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 Q8N1Y9 231 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 FBXW8Q8N3Y1 598 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 DCLK2Q8N568 766 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 ANKRD44Q8N8A2 993 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 CDYL2Q8N8U2 506 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 ASB15Q8WXK1 588 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 TNFRSF25Q93038 417 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 CEP295NLQ96MC4 621 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 ZNF396Q96N95 335 aaPredicted RBP6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 PIP5K1AQ99755 562 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 RHOXF2Q9BQY4 288 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 SLC39A3Q9BRY0 314 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 HDAC8Q9BY41 377 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 TAOK3Q9H2K8 898 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 TRPV5Q9NQA5 729 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 GALNT8Q9NY28 637 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 SLC25A10Q9UBX3 287 aaPredicted RBP6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 SEC63Q9UGP8 760 aaKnown RBP6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 SLCO3A1Q9UIG8 710 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 KCNH3Q9ULD8 1083 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 ADAMTS8Q9UP79 889 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 RPH3AQ9Y2J0 694 aaPredicted RBP6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 NOSIPQ9Y314 301 aaKnown RBP6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 ASB1Q9Y576 335 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 MAGI3Q5TCQ9 1506 aa6.14□□□□□ -1.43
CBX1P3-201ENST00000413296 TRBC2A0A5B9 178 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 F2RL2O00254 374 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 O00370 1275 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 CTDSP2O14595 271 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 AXIN1O15169 862 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 CTAGE5O15320 804 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 FGF10O15520 208 aaPredicted RBP6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 VEGFDO43915 354 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 ALPPP05187 535 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 TUBBP07437 444 aa6.13□□□□□ -1.43
CBX1P3-201ENST00000413296 ALPPL2P10696 532 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms