RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 TLK1Q9UKI8 766 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 PLAAQ9Y263 795 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 RBAK-RBAKDNI3L0D1 243 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 KRT37O76014 449 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 RHOBTB1O94844 696 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 COILP38432 576 aaPredicted RBP8.8□□□□□ -1
SYNE1-211ENST00000413186 PPP3CCP48454 512 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 NR2C2P49116 596 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 NDUFV1P49821 464 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 ATP1A2P50993 1020 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 POLD3Q15054 466 aaPredicted RBP8.8□□□□□ -1
SYNE1-211ENST00000413186 KLHL38Q2WGJ6 581 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 CRELD2Q6UXH1 353 aaPredicted RBP8.8□□□□□ -1
SYNE1-211ENST00000413186 VSIG1Q86XK7 387 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 KATNAL2Q8IYT4 538 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 TNS4Q8IZW8 715 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 GDAP1Q8TB36 358 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 HSD3B7Q9H2F3 369 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 SLC27A5Q9Y2P5 690 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 IQANK1A0A1B0GTG1 560 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 CLDN5O00501 218 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 TIMP1P01033 207 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 CHKAP35790 457 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 ASPAP45381 313 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 PLA2G4AP47712 749 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 CCNG2Q16589 344 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 HIF1AQ16665 826 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 GEN1Q17RS7 908 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 BRMS1LQ5PSV4 323 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 NAPEPLDQ6IQ20 393 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 MFSD5Q6N075 450 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 POLNQ7Z5Q5 900 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 NT5DC3Q86UY8 548 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 CCDC197Q8NCU1 140 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 FNIP1Q8TF40 1166 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 CFAP36Q96G28 342 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 NUDCD1Q96RS6 583 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 CORO1BQ9BR76 489 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 CFHR5Q9BXR6 569 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 GPATCH2LQ9NWQ4 482 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 MID2Q9UJV3 735 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 FAM50BQ9Y247 325 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 ASB3Q9Y575 518 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 ADAMTSL1Q8N6G6 1762 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 MYH9P35579 1960 aaKnown RBP8.8□□□□□ -1
SYNE1-211ENST00000413186 FGF10O15520 208 aaPredicted RBP8.8□□□□□ -1
SYNE1-211ENST00000413186 SYN1P17600 705 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 CYP2F1P24903 491 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 NAA30Q147X3 362 aaPredicted RBP8.8□□□□□ -1
SYNE1-211ENST00000413186 SOWAHAQ2M3V2 549 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 STRADAQ7RTN6 431 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 HDDC2Q7Z4H3 204 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 LINC00523Q86TU6 105 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 EIF1ADQ8N9N8 165 aaKnown RBP8.8□□□□□ -1
SYNE1-211ENST00000413186 XPO6Q96QU8 1125 aaKnown RBP8.8□□□□□ -1
SYNE1-211ENST00000413186 RAD9AQ99638 391 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 LRRC1Q9BTT6 524 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 CINPQ9BW66 212 aaPredicted RBP8.8□□□□□ -1
SYNE1-211ENST00000413186 UBXN6Q9BZV1 441 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 SIX2Q9NPC8 291 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 TAS2R14Q9NYV8 317 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 AFF4Q9UHB7 1163 aaKnown RBP8.8□□□□□ -1
SYNE1-211ENST00000413186 KRT38O76015 456 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 CSF2RAP15509 400 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 PROZP22891 400 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 CARSP49589 748 aaKnown RBP8.8□□□□□ -1
SYNE1-211ENST00000413186 PMS2P54278 862 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 PRAMEP78395 509 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 DDR2Q16832 855 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 HGSNATQ68CP4 663 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 JAMLQ86YT9 394 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 CMTR2Q8IYT2 770 aaKnown RBP8.8□□□□□ -1
SYNE1-211ENST00000413186 ATAD1Q8NBU5 361 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 DEPDC1BQ8WUY9 529 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 TMA16Q96EY4 203 aaKnown RBP8.8□□□□□ -1
SYNE1-211ENST00000413186 TKTL2Q9H0I9 626 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 ACTR5Q9H9F9 607 aaPredicted RBP8.8□□□□□ -1
SYNE1-211ENST00000413186 PTPRHQ9HD43 1115 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 SMPD4Q9NXE4 827 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 ZMYM5Q9UJ78 669 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 SUFUQ9UMX1 484 aa8.8□□□□□ -1
SYNE1-211ENST00000413186 RAMP2O60895 175 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 APRTP07741 180 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 HOXA11P31270 313 aaPredicted RBP8.79□□□□□ -1
SYNE1-211ENST00000413186 GJA8P48165 433 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 ASPHQ12797 758 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 PTPN20Q4JDL3 420 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 MARCH8Q5T0T0 291 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 MAP3K21Q5TCX8 1036 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 ANKRD20A3Q5VUR7 823 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 SLC26A9Q7LBE3 791 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 APTXQ7Z2E3 356 aaKnown RBP8.79□□□□□ -1
SYNE1-211ENST00000413186 MRPL10Q7Z7H8 261 aaKnown RBP8.79□□□□□ -1
SYNE1-211ENST00000413186 GFM2Q969S9 779 aaKnown RBP8.79□□□□□ -1
SYNE1-211ENST00000413186 GAS2L1Q99501 681 aaPredicted RBP8.79□□□□□ -1
SYNE1-211ENST00000413186 TACO1Q9BSH4 297 aaKnown RBP8.79□□□□□ -1
SYNE1-211ENST00000413186 BCO2Q9BYV7 579 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 RBM12Q9NTZ6 932 aaKnown RBP8.79□□□□□ -1
SYNE1-211ENST00000413186 SLC25A13Q9UJS0 675 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 ZNF510Q9Y2H8 683 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms