RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 ADH1CP00326 375 aa13.72□□□□□ -0.21
HDAC8-210ENST00000412342 CCDC172P0C7W6 258 aa13.72□□□□□ -0.21
HDAC8-210ENST00000412342 CHRM1P11229 460 aaPredicted RBP13.72□□□□□ -0.21
HDAC8-210ENST00000412342 EIF2DP41214 584 aaKnown RBP13.72□□□□□ -0.21
HDAC8-210ENST00000412342 GALK1P51570 392 aa13.72□□□□□ -0.21
HDAC8-210ENST00000412342 TBX4P57082 545 aa13.72□□□□□ -0.21
HDAC8-210ENST00000412342 ZBED6P86452 979 aa13.72□□□□□ -0.21
HDAC8-210ENST00000412342 MESP2Q0VG99 397 aa13.72□□□□□ -0.21
HDAC8-210ENST00000412342 NR1H3Q13133 447 aa13.72□□□□□ -0.21
HDAC8-210ENST00000412342 GAS6Q14393 721 aa13.72□□□□□ -0.21
HDAC8-210ENST00000412342 DCAF6Q58WW2 860 aa13.72□□□□□ -0.21
HDAC8-210ENST00000412342 MON1BQ7L1V2 547 aa13.72□□□□□ -0.21
HDAC8-210ENST00000412342 BNIPLQ7Z465 357 aa13.72□□□□□ -0.21
HDAC8-210ENST00000412342 DENND1CQ8IV53 801 aa13.72□□□□□ -0.21
HDAC8-210ENST00000412342 CPXM2Q8N436 756 aa13.72□□□□□ -0.21
HDAC8-210ENST00000412342 SYN2Q92777 582 aaPredicted RBP13.72□□□□□ -0.21
HDAC8-210ENST00000412342 CD101Q93033 1021 aa13.72□□□□□ -0.21
HDAC8-210ENST00000412342 NT5C3BQ969T7 300 aa13.72□□□□□ -0.21
HDAC8-210ENST00000412342 P2RY13Q9BPV8 354 aa13.72□□□□□ -0.21
HDAC8-210ENST00000412342 C11orf70Q9BRQ4 267 aa13.72□□□□□ -0.21
HDAC8-210ENST00000412342 RBM12Q9NTZ6 932 aaKnown RBP13.72□□□□□ -0.21
HDAC8-210ENST00000412342 CALCOCO1Q9P1Z2 691 aa13.72□□□□□ -0.21
HDAC8-210ENST00000412342 TLR6Q9Y2C9 796 aa13.72□□□□□ -0.21
HDAC8-210ENST00000412342 MUC6Q6W4X9 2439 aa13.71□□□□□ -0.21
HDAC8-210ENST00000412342 DDX3XO00571 662 aaKnown RBP eCLIP13.71□□□□□ -0.21
HDAC8-210ENST00000412342 PENKP01210 267 aaPredicted RBP13.71□□□□□ -0.21
HDAC8-210ENST00000412342 TPM3P06753 285 aa13.71□□□□□ -0.21
HDAC8-210ENST00000412342 SKILP12757 684 aa13.71□□□□□ -0.21
HDAC8-210ENST00000412342 CASP14P31944 242 aa13.71□□□□□ -0.21
HDAC8-210ENST00000412342 NOS2P35228 1153 aa13.71□□□□□ -0.21
HDAC8-210ENST00000412342 FLT3P36888 993 aa13.71□□□□□ -0.21
HDAC8-210ENST00000412342 MATKP42679 507 aa13.71□□□□□ -0.21
HDAC8-210ENST00000412342 SLC6A11P48066 632 aa13.71□□□□□ -0.21
HDAC8-210ENST00000412342 NUBP1P53384 320 aa13.71□□□□□ -0.21
HDAC8-210ENST00000412342 AMPD2Q01433 879 aa13.71□□□□□ -0.21
HDAC8-210ENST00000412342 GAD2Q05329 585 aa13.71□□□□□ -0.21
HDAC8-210ENST00000412342 ARID5BQ14865 1188 aa13.71□□□□□ -0.21
HDAC8-210ENST00000412342 FAM133BQ5BKY9 247 aaKnown RBP13.71□□□□□ -0.21
HDAC8-210ENST00000412342 FAM102AQ5T9C2 384 aaPredicted RBP13.71□□□□□ -0.21
HDAC8-210ENST00000412342 FYB2Q5VWT5 728 aa13.71□□□□□ -0.21
HDAC8-210ENST00000412342 SPECC1LQ69YQ0 1117 aa13.71□□□□□ -0.21
HDAC8-210ENST00000412342 ARCQ7LC44 396 aa13.71□□□□□ -0.21
HDAC8-210ENST00000412342 DTWD2Q8NBA8 298 aa13.71□□□□□ -0.21
HDAC8-210ENST00000412342 MSANTD4Q8NCY6 345 aa13.71□□□□□ -0.21
HDAC8-210ENST00000412342 PRSS33Q8NF86 280 aa13.71□□□□□ -0.21
HDAC8-210ENST00000412342 AZIN2Q96A70 460 aa13.71□□□□□ -0.21
HDAC8-210ENST00000412342 NPY6RQ99463 290 aa13.71□□□□□ -0.21
HDAC8-210ENST00000412342 CHRDQ9H2X0 955 aa13.71□□□□□ -0.21
HDAC8-210ENST00000412342 LMAN1LQ9HAT1 526 aa13.71□□□□□ -0.21
HDAC8-210ENST00000412342 TAS2R14Q9NYV8 317 aa13.71□□□□□ -0.21
HDAC8-210ENST00000412342 WDFY4Q6ZS81 3184 aa13.7□□□□□ -0.22
HDAC8-210ENST00000412342 GOLGA8SH3BPF8 625 aa13.7□□□□□ -0.22
HDAC8-210ENST00000412342 GALR2O43603 387 aaPredicted RBP13.7□□□□□ -0.22
HDAC8-210ENST00000412342 CACNG3O60359 315 aa13.7□□□□□ -0.22
HDAC8-210ENST00000412342 EGFP01133 1207 aa13.7□□□□□ -0.22
HDAC8-210ENST00000412342 TFE3P19532 575 aaPredicted RBP13.7□□□□□ -0.22
HDAC8-210ENST00000412342 HNRNPH3P31942 346 aaKnown RBP13.7□□□□□ -0.22
HDAC8-210ENST00000412342 MAGEA9P43362 315 aa13.7□□□□□ -0.22
HDAC8-210ENST00000412342 NSFP46459 744 aaKnown RBP13.7□□□□□ -0.22
HDAC8-210ENST00000412342 HARS2P49590 506 aaKnown RBP13.7□□□□□ -0.22
HDAC8-210ENST00000412342 C1QBPQ07021 282 aaKnown RBP13.7□□□□□ -0.22
HDAC8-210ENST00000412342 KLHL30Q0D2K2 578 aa13.7□□□□□ -0.22
HDAC8-210ENST00000412342 DGKKQ5KSL6 1271 aa13.7□□□□□ -0.22
HDAC8-210ENST00000412342 NUGGCQ68CJ6 796 aa13.7□□□□□ -0.22
HDAC8-210ENST00000412342 RNF43Q68DV7 783 aa13.7□□□□□ -0.22
HDAC8-210ENST00000412342 NADSYN1Q6IA69 706 aa13.7□□□□□ -0.22
HDAC8-210ENST00000412342 ACAD10Q6JQN1 1059 aa13.7□□□□□ -0.22
HDAC8-210ENST00000412342 Q6ZS52 159 aa13.7□□□□□ -0.22
HDAC8-210ENST00000412342 TPGS1Q6ZTW0 290 aa13.7□□□□□ -0.22
HDAC8-210ENST00000412342 SFTPA1Q8IWL2 248 aa13.7□□□□□ -0.22
HDAC8-210ENST00000412342 CPLX3Q8WVH0 158 aa13.7□□□□□ -0.22
HDAC8-210ENST00000412342 NUCKS1Q9H1E3 243 aaKnown RBP13.7□□□□□ -0.22
HDAC8-210ENST00000412342 METTL5Q9NRN9 209 aaKnown RBP13.7□□□□□ -0.22
HDAC8-210ENST00000412342 ADAM22Q9P0K1 906 aa13.7□□□□□ -0.22
HDAC8-210ENST00000412342 RAPGEFL1Q9UHV5 662 aa13.7□□□□□ -0.22
HDAC8-210ENST00000412342 FBXO10Q9UK96 956 aa13.7□□□□□ -0.22
HDAC8-210ENST00000412342 LUC7L2Q9Y383 392 aaKnown RBP13.7□□□□□ -0.22
HDAC8-210ENST00000412342 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.7□□□□□ -0.22
HDAC8-210ENST00000412342 CACNA1IQ9P0X4 2223 aa13.7□□□□□ -0.22
HDAC8-210ENST00000412342 A0A0A0MRY4 1105 aa13.69□□□□□ -0.22
HDAC8-210ENST00000412342 ANTXRLA6NF34 631 aa13.69□□□□□ -0.22
HDAC8-210ENST00000412342 KCNU1A8MYU2 1149 aa13.69□□□□□ -0.22
HDAC8-210ENST00000412342 NEDD8-MDP1E9PL57 170 aa13.69□□□□□ -0.22
HDAC8-210ENST00000412342 TRIM24O15164 1050 aa13.69□□□□□ -0.22
HDAC8-210ENST00000412342 NCAM2O15394 837 aa13.69□□□□□ -0.22
HDAC8-210ENST00000412342 ACSL4O60488 711 aa13.69□□□□□ -0.22
HDAC8-210ENST00000412342 TULP3O75386 442 aa13.69□□□□□ -0.22
HDAC8-210ENST00000412342 GJB6O95452 261 aa13.69□□□□□ -0.22
HDAC8-210ENST00000412342 CALB1P05937 261 aa13.69□□□□□ -0.22
HDAC8-210ENST00000412342 PLEKP08567 350 aaPredicted RBP13.69□□□□□ -0.22
HDAC8-210ENST00000412342 TYRP14679 529 aa13.69□□□□□ -0.22
HDAC8-210ENST00000412342 TNFAIP3P21580 790 aa13.69□□□□□ -0.22
HDAC8-210ENST00000412342 DRD1P21728 446 aa13.69□□□□□ -0.22
HDAC8-210ENST00000412342 SLC6A4P31645 630 aa13.69□□□□□ -0.22
HDAC8-210ENST00000412342 CHKAP35790 457 aa13.69□□□□□ -0.22
HDAC8-210ENST00000412342 SGSHP51688 502 aa13.69□□□□□ -0.22
HDAC8-210ENST00000412342 CDK17Q00537 523 aa13.69□□□□□ -0.22
HDAC8-210ENST00000412342 TCF15Q12870 199 aa13.69□□□□□ -0.22
HDAC8-210ENST00000412342 TBX2Q13207 712 aaPredicted RBP13.69□□□□□ -0.22
HDAC8-210ENST00000412342 LRRC32Q14392 662 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms