RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 CCDC150Q8NCX0 1101 aa17.29■□□□□ 0.36
SCAMP4-203ENST00000411971 FAXDC2Q96IV6 333 aa17.29■□□□□ 0.36
SCAMP4-203ENST00000411971 TMEM121BQ9BXQ6 578 aaPredicted RBP17.29■□□□□ 0.36
SCAMP4-203ENST00000411971 UBXN6Q9BZV1 441 aa17.29■□□□□ 0.36
SCAMP4-203ENST00000411971 SFMBT1Q9UHJ3 866 aa17.29■□□□□ 0.36
SCAMP4-203ENST00000411971 CHD6Q8TD26 2715 aa17.29■□□□□ 0.36
SCAMP4-203ENST00000411971 YJEFN3A6XGL0 299 aa17.28■□□□□ 0.36
SCAMP4-203ENST00000411971 C1QTNF9BB2RNN3 333 aa17.28■□□□□ 0.36
SCAMP4-203ENST00000411971 E7ENQ6 273 aa17.28■□□□□ 0.36
SCAMP4-203ENST00000411971 ZBED1O96006 694 aa17.28■□□□□ 0.36
SCAMP4-203ENST00000411971 CFIP05156 583 aa17.28■□□□□ 0.36
SCAMP4-203ENST00000411971 C1QTNF9P0C862 333 aa17.28■□□□□ 0.36
SCAMP4-203ENST00000411971 CSRP1P21291 193 aaKnown RBP17.28■□□□□ 0.36
SCAMP4-203ENST00000411971 MAOBP27338 520 aa17.28■□□□□ 0.36
SCAMP4-203ENST00000411971 SGSHP51688 502 aa17.28■□□□□ 0.36
SCAMP4-203ENST00000411971 FAM193AP78312 1265 aa17.28■□□□□ 0.36
SCAMP4-203ENST00000411971 ADIGQ0VDE8 80 aa17.28■□□□□ 0.36
SCAMP4-203ENST00000411971 FOXC1Q12948 553 aa17.28■□□□□ 0.36
SCAMP4-203ENST00000411971 PIP4P1Q86T03 277 aa17.28■□□□□ 0.36
SCAMP4-203ENST00000411971 EDEM1Q92611 657 aa17.28■□□□□ 0.36
SCAMP4-203ENST00000411971 HSPA12BQ96MM6 686 aa17.28■□□□□ 0.36
SCAMP4-203ENST00000411971 THAP10Q9P2Z0 257 aaPredicted RBP17.28■□□□□ 0.36
SCAMP4-203ENST00000411971 O00370 1275 aa17.27■□□□□ 0.36
SCAMP4-203ENST00000411971 PIK3R2O00459 728 aa17.27■□□□□ 0.36
SCAMP4-203ENST00000411971 XPO1O14980 1071 aaKnown RBP17.27■□□□□ 0.36
SCAMP4-203ENST00000411971 SLC16A3O15427 465 aaKnown RBP17.27■□□□□ 0.36
SCAMP4-203ENST00000411971 AP5Z1O43299 807 aa17.27■□□□□ 0.36
SCAMP4-203ENST00000411971 MSI1O43347 362 aaKnown RBP17.27■□□□□ 0.36
SCAMP4-203ENST00000411971 TSPAN3O60637 253 aa17.27■□□□□ 0.36
SCAMP4-203ENST00000411971 PRKCHP24723 683 aa17.27■□□□□ 0.36
SCAMP4-203ENST00000411971 COG7P83436 770 aa17.27■□□□□ 0.36
SCAMP4-203ENST00000411971 TRIP4Q15650 581 aaPredicted RBP17.27■□□□□ 0.36
SCAMP4-203ENST00000411971 PREPLQ4J6C6 727 aaPredicted RBP17.27■□□□□ 0.36
SCAMP4-203ENST00000411971 SPDYCQ5MJ68 293 aa17.27■□□□□ 0.36
SCAMP4-203ENST00000411971 KIAA1324Q6UXG2 1013 aaKnown RBP17.27■□□□□ 0.36
SCAMP4-203ENST00000411971 TRIML1Q8N9V2 468 aa17.27■□□□□ 0.36
SCAMP4-203ENST00000411971 LMO3Q8TAP4 145 aa17.27■□□□□ 0.36
SCAMP4-203ENST00000411971 CLEC4CQ8WTT0 213 aa17.27■□□□□ 0.36
SCAMP4-203ENST00000411971 GSDMAQ96QA5 445 aa17.27■□□□□ 0.36
SCAMP4-203ENST00000411971 NUSAP1Q9BXS6 441 aaKnown RBP17.27■□□□□ 0.36
SCAMP4-203ENST00000411971 ATP6V1DQ9Y5K8 247 aa17.27■□□□□ 0.36
SCAMP4-203ENST00000411971 GTF3C3Q9Y5Q9 886 aa17.27■□□□□ 0.36
SCAMP4-203ENST00000411971 TMEM131Q92545 1883 aa17.27■□□□□ 0.35
SCAMP4-203ENST00000411971 KNL1Q8NG31 2342 aa17.26■□□□□ 0.35
SCAMP4-203ENST00000411971 CEACAM1P13688 526 aa17.26■□□□□ 0.35
SCAMP4-203ENST00000411971 TRIM21P19474 475 aaKnown RBP17.26■□□□□ 0.35
SCAMP4-203ENST00000411971 HOXD9P28356 352 aaPredicted RBP17.26■□□□□ 0.35
SCAMP4-203ENST00000411971 COPAP53621 1224 aa17.26■□□□□ 0.35
SCAMP4-203ENST00000411971 BCAT1P54687 386 aa17.26■□□□□ 0.35
SCAMP4-203ENST00000411971 FKBP3Q00688 224 aaKnown RBP17.26■□□□□ 0.35
SCAMP4-203ENST00000411971 SEMA3BQ13214 749 aa17.26■□□□□ 0.35
SCAMP4-203ENST00000411971 BYSLQ13895 437 aaKnown RBP17.26■□□□□ 0.35
SCAMP4-203ENST00000411971 ZNF234Q14588 700 aa17.26■□□□□ 0.35
SCAMP4-203ENST00000411971 SGO2Q562F6 1265 aa17.26■□□□□ 0.35
SCAMP4-203ENST00000411971 SLC36A4Q6YBV0 504 aa17.26■□□□□ 0.35
SCAMP4-203ENST00000411971 NUDT18Q6ZVK8 323 aa17.26■□□□□ 0.35
SCAMP4-203ENST00000411971 FMNL3Q8IVF7 1028 aa17.26■□□□□ 0.35
SCAMP4-203ENST00000411971 CPXM2Q8N436 756 aa17.26■□□□□ 0.35
SCAMP4-203ENST00000411971 WFDC5Q8TCV5 224 aa17.26■□□□□ 0.35
SCAMP4-203ENST00000411971 MYEOVQ96EZ4 313 aa17.26■□□□□ 0.35
SCAMP4-203ENST00000411971 ZNF419Q96HQ0 510 aaPredicted RBP17.26■□□□□ 0.35
SCAMP4-203ENST00000411971 MAN1B1Q9UKM7 699 aa17.26■□□□□ 0.35
SCAMP4-203ENST00000411971 RALYQ9UKM9 306 aaKnown RBP17.26■□□□□ 0.35
SCAMP4-203ENST00000411971 SLC6A14Q9UN76 642 aa17.26■□□□□ 0.35
SCAMP4-203ENST00000411971 SLCO1B1Q9Y6L6 691 aa17.26■□□□□ 0.35
SCAMP4-203ENST00000411971 SPAARA0A1B0GVQ0 90 aa17.25■□□□□ 0.35
SCAMP4-203ENST00000411971 STX10O60499 249 aa17.25■□□□□ 0.35
SCAMP4-203ENST00000411971 SERPINF2P08697 491 aa17.25■□□□□ 0.35
SCAMP4-203ENST00000411971 HLA-EP13747 358 aa17.25■□□□□ 0.35
SCAMP4-203ENST00000411971 CD19P15391 556 aa17.25■□□□□ 0.35
SCAMP4-203ENST00000411971 CHKAP35790 457 aa17.25■□□□□ 0.35
SCAMP4-203ENST00000411971 FMO5P49326 533 aa17.25■□□□□ 0.35
SCAMP4-203ENST00000411971 RGS7P49802 495 aa17.25■□□□□ 0.35
SCAMP4-203ENST00000411971 BST2Q10589 180 aaKnown RBP17.25■□□□□ 0.35
SCAMP4-203ENST00000411971 LMAN2Q12907 356 aa17.25■□□□□ 0.35
SCAMP4-203ENST00000411971 DUOXA1Q1HG43 343 aa17.25■□□□□ 0.35
SCAMP4-203ENST00000411971 BSPRYQ5W0U4 402 aa17.25■□□□□ 0.35
SCAMP4-203ENST00000411971 SDE2Q6IQ49 451 aa17.25■□□□□ 0.35
SCAMP4-203ENST00000411971 PMF1Q6P1K2 205 aa17.25■□□□□ 0.35
SCAMP4-203ENST00000411971 RSRC2Q7L4I2 434 aaKnown RBP17.25■□□□□ 0.35
SCAMP4-203ENST00000411971 CACUL1Q86Y37 369 aa17.25■□□□□ 0.35
SCAMP4-203ENST00000411971 ARHGEF19Q8IW93 802 aa17.25■□□□□ 0.35
SCAMP4-203ENST00000411971 ZNF366Q8N895 744 aa17.25■□□□□ 0.35
SCAMP4-203ENST00000411971 GTPBP2Q9BX10 602 aaKnown RBP17.25■□□□□ 0.35
SCAMP4-203ENST00000411971 DCLK3Q9C098 648 aa17.25■□□□□ 0.35
SCAMP4-203ENST00000411971 ELOVL2Q9NXB9 296 aa17.25■□□□□ 0.35
SCAMP4-203ENST00000411971 WSB2Q9NYS7 404 aaPredicted RBP17.25■□□□□ 0.35
SCAMP4-203ENST00000411971 USP36Q9P275 1121 aaKnown RBP17.25■□□□□ 0.35
SCAMP4-203ENST00000411971 ARMCX3Q9UH62 379 aaPredicted RBP17.25■□□□□ 0.35
SCAMP4-203ENST00000411971 ZNF510Q9Y2H8 683 aa17.25■□□□□ 0.35
SCAMP4-203ENST00000411971 GOLGA6L7A0A1B0GV03 622 aa17.24■□□□□ 0.35
SCAMP4-203ENST00000411971 ZNF217O75362 1048 aa17.24■□□□□ 0.35
SCAMP4-203ENST00000411971 GJB3O75712 270 aa17.24■□□□□ 0.35
SCAMP4-203ENST00000411971 LCP1P13796 627 aa17.24■□□□□ 0.35
SCAMP4-203ENST00000411971 CD59P13987 128 aa17.24■□□□□ 0.35
SCAMP4-203ENST00000411971 BRD2P25440 801 aaKnown RBP17.24■□□□□ 0.35
SCAMP4-203ENST00000411971 HLA-FP30511 346 aa17.24■□□□□ 0.35
SCAMP4-203ENST00000411971 DAOAP59103 153 aa17.24■□□□□ 0.35
SCAMP4-203ENST00000411971 TTI2Q6NXR4 508 aa17.24■□□□□ 0.35
SCAMP4-203ENST00000411971 TADA2BQ86TJ2 420 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms