RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 CPA4Q9UI42 421 aa2.9□□□□□ -1.95
HMGB3P2-201ENST00000411913 PRDM4Q9UKN5 801 aa2.9□□□□□ -1.95
HMGB3P2-201ENST00000411913 OGDHLQ9ULD0 1010 aa2.9□□□□□ -1.95
HMGB3P2-201ENST00000411913 PCDHA6Q9UN73 950 aa2.9□□□□□ -1.95
HMGB3P2-201ENST00000411913 MED16Q9Y2X0 877 aa2.9□□□□□ -1.95
HMGB3P2-201ENST00000411913 RRBP1Q9P2E9 1410 aaKnown RBP2.9□□□□□ -1.95
HMGB3P2-201ENST00000411913 NTN3O00634 580 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 TBX3O15119 743 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 CTIFO43310 598 aaKnown RBP2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 PMPCBO75439 489 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 IL18RAPO95256 599 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 THP07101 528 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 CD63P08962 238 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 APEHP13798 732 aaKnown RBP2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 BRAFP15056 766 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 CLIP1P30622 1438 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 VIPR2P41587 438 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 PRKAG1P54619 331 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 SUMO3P55854 103 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 RRP1P56182 461 aaKnown RBP2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 SOX8P57073 446 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 RPL36AP83881 106 aaKnown RBP2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 B4GALNT1Q00973 533 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 KRT17Q04695 432 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 PPATQ06203 517 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 ZNF543Q08ER8 600 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 KCNB1Q14721 858 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 FAM83BQ5T0W9 1011 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 IZUMO3Q5VZ72 239 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 XRRA1Q6P2D8 792 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 C1orf228Q6PIY5 440 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 PTCHD4Q6ZW05 846 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 VPS8Q8N3P4 1428 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 OR2C3Q8N628 320 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 BRI3BPQ8WY22 251 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 NMD3Q96D46 503 aaKnown RBP2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 RIPOR3Q96MK2 946 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 SCNM1Q9BWG6 230 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 COLEC11Q9BWP8 271 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 PNPLA8Q9NP80 782 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 DECR2Q9NUI1 292 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 TMEM45AQ9NWC5 275 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 FNIP2Q9P278 1114 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 PLEKHM1Q9Y4G2 1056 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 PAXBP1Q9Y5B6 917 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 SNX14Q9Y5W7 946 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 SNX13Q9Y5W8 968 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 CEP164Q9UPV0 1460 aa2.89□□□□□ -1.95
HMGB3P2-201ENST00000411913 SMARCA2P51531 1590 aa2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 MYO1CO00159 1063 aa2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 KPNA5O15131 536 aa2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 NDUFB8O95169 186 aa2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 HDCP19113 662 aa2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 TNFSF4P23510 183 aa2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 TACR3P29371 465 aa2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 ANP32AP39687 249 aaKnown RBP2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 STT3AP46977 705 aa2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 KCNJ4P48050 445 aa2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 ALDH7A1P49419 539 aaKnown RBP2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 CALD1Q05682 793 aaKnown RBP2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 CHAF1AQ13111 956 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 DAG1Q14118 895 aa2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 DHX8Q14562 1220 aaKnown RBP2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 GRAMD1BQ3KR37 738 aa2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 FAM209BQ5JX69 171 aa2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 ZNF783Q6ZMS7 281 aa2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 SESTD1Q86VW0 696 aa2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 ZNF280BQ86YH2 543 aa2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 RAB11FIP4Q86YS3 637 aa2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 SPATA2LQ8IUW3 424 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 TMEM199Q8N511 208 aa2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 IQCF1Q8N6M8 205 aa2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 OR6B3Q8NGW1 331 aa2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 NEUROG1Q92886 237 aa2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 SLITRK1Q96PX8 696 aa2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 P2RX7Q99572 595 aaKnown RBP2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 C17orf80Q9BSJ5 609 aa2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 MYLK2Q9H1R3 596 aa2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 PTPRHQ9HD43 1115 aa2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 ARFGAP3Q9NP61 516 aa2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 STK32BQ9NY57 414 aa2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 COL20A1Q9P218 1284 aa2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 XPR1Q9UBH6 696 aa2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 CPNE7Q9UBL6 633 aa2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 RGS17Q9UGC6 210 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 AFF4Q9UHB7 1163 aaKnown RBP2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 ICAM5Q9UMF0 924 aa2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 CORO2BQ9UQ03 480 aa2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 CCDC88BA6NC98 1476 aa2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 GOLGA3Q08378 1498 aa2.88□□□□□ -1.95
HMGB3P2-201ENST00000411913 TRIM43BA6NCK2 446 aa2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 POM121BA6NF01 834 aa2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 BTN3A1O00481 513 aa2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 TNFRSF13BO14836 293 aaPredicted RBP2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 TBC1D4O60343 1298 aa2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 ZC3H11AO75152 810 aaKnown RBP eCLIP2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 TCEA3O75764 348 aa2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 FGF18O76093 207 aa2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 FGF2P09038 288 aa2.87□□□□□ -1.95
HMGB3P2-201ENST00000411913 PARP1P09874 1014 aaKnown RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms