RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 ATL3Q6DD88 541 aa17.54■□□□□ 0.4
MRPL55-220ENST00000411464 IL27RAQ6UWB1 636 aa17.54■□□□□ 0.4
MRPL55-220ENST00000411464 ZCCHC9Q8N567 271 aaKnown RBP17.54■□□□□ 0.4
MRPL55-220ENST00000411464 P2RY11Q96G91 374 aa17.54■□□□□ 0.4
MRPL55-220ENST00000411464 HEXIM2Q96MH2 286 aaKnown RBP17.54■□□□□ 0.4
MRPL55-220ENST00000411464 NUP58Q9BVL2 599 aa17.54■□□□□ 0.4
MRPL55-220ENST00000411464 NIF3L1Q9GZT8 377 aa17.54■□□□□ 0.4
MRPL55-220ENST00000411464 APOBEC3GQ9HC16 384 aaKnown RBP17.54■□□□□ 0.4
MRPL55-220ENST00000411464 ELOVL2Q9NXB9 296 aa17.54■□□□□ 0.4
MRPL55-220ENST00000411464 STRIP2Q9ULQ0 834 aa17.54■□□□□ 0.4
MRPL55-220ENST00000411464 DSPP15924 2871 aaKnown RBP17.54■□□□□ 0.4
MRPL55-220ENST00000411464 PKD1L2Q7Z442 2459 aa17.53■□□□□ 0.4
MRPL55-220ENST00000411464 METTL12A8MUP2 240 aa17.53■□□□□ 0.4
MRPL55-220ENST00000411464 KCNJ18B7U540 433 aa17.53■□□□□ 0.4
MRPL55-220ENST00000411464 MAPK13O15264 365 aa17.53■□□□□ 0.4
MRPL55-220ENST00000411464 TIMM44O43615 452 aa17.53■□□□□ 0.4
MRPL55-220ENST00000411464 CILPO75339 1184 aa17.53■□□□□ 0.4
MRPL55-220ENST00000411464 CAPNS1P04632 268 aa17.53■□□□□ 0.4
MRPL55-220ENST00000411464 ZSCAN22P10073 491 aaPredicted RBP17.53■□□□□ 0.4
MRPL55-220ENST00000411464 KRT13P13646 458 aa17.53■□□□□ 0.4
MRPL55-220ENST00000411464 GCLMP48507 274 aa17.53■□□□□ 0.4
MRPL55-220ENST00000411464 ARID5AQ03989 594 aa17.53■□□□□ 0.4
MRPL55-220ENST00000411464 EIF4HQ15056 248 aaKnown RBP17.53■□□□□ 0.4
MRPL55-220ENST00000411464 ZNF394Q53GI3 561 aa17.53■□□□□ 0.4
MRPL55-220ENST00000411464 PPP1R26Q5T8A7 1209 aaPredicted RBP17.53■□□□□ 0.4
MRPL55-220ENST00000411464 DCAF12L1Q5VU92 463 aa17.53■□□□□ 0.4
MRPL55-220ENST00000411464 INTS8Q75QN2 995 aaKnown RBP17.53■□□□□ 0.4
MRPL55-220ENST00000411464 RSRC2Q7L4I2 434 aaKnown RBP17.53■□□□□ 0.4
MRPL55-220ENST00000411464 ANKS1BQ7Z6G8 1248 aa17.53■□□□□ 0.4
MRPL55-220ENST00000411464 GLRX5Q86SX6 157 aa17.53■□□□□ 0.4
MRPL55-220ENST00000411464 DENND1CQ8IV53 801 aa17.53■□□□□ 0.4
MRPL55-220ENST00000411464 ARHGAP18Q8N392 663 aa17.53■□□□□ 0.4
MRPL55-220ENST00000411464 TAS1R2Q8TE23 839 aa17.53■□□□□ 0.4
MRPL55-220ENST00000411464 DDI1Q8WTU0 396 aa17.53■□□□□ 0.4
MRPL55-220ENST00000411464 PIWIL1Q96J94 861 aaKnown RBP17.53■□□□□ 0.4
MRPL55-220ENST00000411464 CIPCQ9C0C6 399 aa17.53■□□□□ 0.4
MRPL55-220ENST00000411464 GAREM1Q9H706 876 aa17.53■□□□□ 0.4
MRPL55-220ENST00000411464 MARCH2Q9P0N8 246 aa17.53■□□□□ 0.4
MRPL55-220ENST00000411464 AGO1Q9UL18 857 aaKnown RBP17.53■□□□□ 0.4
MRPL55-220ENST00000411464 TNRC6BQ9UPQ9 1833 aaKnown RBP17.53■□□□□ 0.4
MRPL55-220ENST00000411464 PLXND1Q9Y4D7 1925 aa17.53■□□□□ 0.4
MRPL55-220ENST00000411464 FREM2Q5SZK8 3169 aa17.52■□□□□ 0.4
MRPL55-220ENST00000411464 MYO18AQ92614 2054 aaKnown RBP17.52■□□□□ 0.4
MRPL55-220ENST00000411464 ACTN4O43707 911 aaKnown RBP17.52■□□□□ 0.4
MRPL55-220ENST00000411464 CER1O95813 267 aa17.52■□□□□ 0.4
MRPL55-220ENST00000411464 ZNF883P0CG24 379 aa17.52■□□□□ 0.4
MRPL55-220ENST00000411464 TRIM49P0CI25 452 aa17.52■□□□□ 0.4
MRPL55-220ENST00000411464 TRIM49CP0CI26 452 aa17.52■□□□□ 0.4
MRPL55-220ENST00000411464 MATKP42679 507 aa17.52■□□□□ 0.4
MRPL55-220ENST00000411464 ZNF234Q14588 700 aa17.52■□□□□ 0.4
MRPL55-220ENST00000411464 SERPINA13PQ6UXR4 307 aa17.52■□□□□ 0.4
MRPL55-220ENST00000411464 CCNI2Q6ZMN8 369 aaPredicted RBP17.52■□□□□ 0.4
MRPL55-220ENST00000411464 SLC2A11Q9BYW1 496 aa17.52■□□□□ 0.4
MRPL55-220ENST00000411464 CCDC86Q9H6F5 360 aaKnown RBP17.52■□□□□ 0.4
MRPL55-220ENST00000411464 MMRN2Q9H8L6 949 aa17.52■□□□□ 0.4
MRPL55-220ENST00000411464 PCOLCE2Q9UKZ9 415 aa17.52■□□□□ 0.4
MRPL55-220ENST00000411464 TRAF3IP3Q9Y228 551 aa17.52■□□□□ 0.4
MRPL55-220ENST00000411464 SLC12A8A0AV02 714 aa17.51■□□□□ 0.39
MRPL55-220ENST00000411464 CBFA2T3O75081 653 aa17.51■□□□□ 0.39
MRPL55-220ENST00000411464 F13A1P00488 732 aa17.51■□□□□ 0.39
MRPL55-220ENST00000411464 IGLV3-19P01714 112 aa17.51■□□□□ 0.39
MRPL55-220ENST00000411464 MYL1P05976 194 aa17.51■□□□□ 0.39
MRPL55-220ENST00000411464 EPHX1P07099 455 aa17.51■□□□□ 0.39
MRPL55-220ENST00000411464 HSP90AA1P07900 732 aaKnown RBP17.51■□□□□ 0.39
MRPL55-220ENST00000411464 NR2F2P24468 414 aa17.51■□□□□ 0.39
MRPL55-220ENST00000411464 SLC8A3P57103 927 aa17.51■□□□□ 0.39
MRPL55-220ENST00000411464 PPP3CAQ08209 521 aa17.51■□□□□ 0.39
MRPL55-220ENST00000411464 HLA-BQ31612 363 aa17.51■□□□□ 0.39
MRPL55-220ENST00000411464 CPXM2Q8N436 756 aa17.51■□□□□ 0.39
MRPL55-220ENST00000411464 TTC39CQ8N584 583 aa17.51■□□□□ 0.39
MRPL55-220ENST00000411464 CCDC47Q96A33 483 aaKnown RBP17.51■□□□□ 0.39
MRPL55-220ENST00000411464 UBXN6Q9BZV1 441 aa17.51■□□□□ 0.39
MRPL55-220ENST00000411464 IL21RQ9HBE5 538 aa17.51■□□□□ 0.39
MRPL55-220ENST00000411464 TM7SF3Q9NS93 570 aa17.51■□□□□ 0.39
MRPL55-220ENST00000411464 KIAA1522Q9P206 1035 aaPredicted RBP17.51■□□□□ 0.39
MRPL55-220ENST00000411464 EIF2B4Q9UI10 523 aaKnown RBP17.51■□□□□ 0.39
MRPL55-220ENST00000411464 RCOR1Q9UKL0 485 aa17.51■□□□□ 0.39
MRPL55-220ENST00000411464 PI4KAP42356 2102 aa17.51■□□□□ 0.39
MRPL55-220ENST00000411464 PCDH15Q96QU1 1955 aa17.5■□□□□ 0.39
MRPL55-220ENST00000411464 BAHCC1Q9P281 2608 aa17.5■□□□□ 0.39
MRPL55-220ENST00000411464 PRKCHP24723 683 aa17.5■□□□□ 0.39
MRPL55-220ENST00000411464 RPL13P26373 211 aaKnown RBP17.5■□□□□ 0.39
MRPL55-220ENST00000411464 YWHAGP61981 247 aaKnown RBP eCLIP17.5■□□□□ 0.39
MRPL55-220ENST00000411464 C19orf48Q6RUI8 117 aa17.5■□□□□ 0.39
MRPL55-220ENST00000411464 SLCO6A1Q86UG4 719 aa17.5■□□□□ 0.39
MRPL55-220ENST00000411464 FAM124AQ86V42 546 aa17.5■□□□□ 0.39
MRPL55-220ENST00000411464 CACUL1Q86Y37 369 aa17.5■□□□□ 0.39
MRPL55-220ENST00000411464 FAM186BQ8IYM0 893 aa17.5■□□□□ 0.39
MRPL55-220ENST00000411464 SORCS1Q8WY21 1168 aa17.5■□□□□ 0.39
MRPL55-220ENST00000411464 CDC6Q99741 560 aa17.5■□□□□ 0.39
MRPL55-220ENST00000411464 PCED1AQ9H1Q7 454 aa17.5■□□□□ 0.39
MRPL55-220ENST00000411464 USP25Q9UHP3 1055 aa17.5■□□□□ 0.39
MRPL55-220ENST00000411464 PLA2G4CQ9UP65 541 aa17.5■□□□□ 0.39
MRPL55-220ENST00000411464 GPSM3Q9Y4H4 160 aa17.5■□□□□ 0.39
MRPL55-220ENST00000411464 WDFY3Q8IZQ1 3526 aa17.5■□□□□ 0.39
MRPL55-220ENST00000411464 PSMC2P35998 433 aaKnown RBP17.49■□□□□ 0.39
MRPL55-220ENST00000411464 HARS2P49590 506 aaKnown RBP17.49■□□□□ 0.39
MRPL55-220ENST00000411464 AFF3P51826 1226 aaKnown RBP17.49■□□□□ 0.39
MRPL55-220ENST00000411464 COPAP53621 1224 aa17.49■□□□□ 0.39
MRPL55-220ENST00000411464 ENPEPQ07075 957 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms