RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 TAF5Q15542 800 aa19.89■□□□□ 0.77
SF3A1-202ENST00000411423 MEA1Q16626 185 aa19.89■□□□□ 0.77
SF3A1-202ENST00000411423 GEN1Q17RS7 908 aa19.89■□□□□ 0.77
SF3A1-202ENST00000411423 CT47A1Q5JQC4 288 aaPredicted RBP19.89■□□□□ 0.77
SF3A1-202ENST00000411423 SYPL2Q5VXT5 272 aa19.89■□□□□ 0.77
SF3A1-202ENST00000411423 TMEM110Q86TL2 294 aa19.89■□□□□ 0.77
SF3A1-202ENST00000411423 SLC47A2Q86VL8 602 aa19.89■□□□□ 0.77
SF3A1-202ENST00000411423 CCDC26Q8TAB7 109 aa19.89■□□□□ 0.77
SF3A1-202ENST00000411423 ERLEC1Q96DZ1 483 aa19.89■□□□□ 0.77
SF3A1-202ENST00000411423 CD248Q9HCU0 757 aa19.89■□□□□ 0.77
SF3A1-202ENST00000411423 STOML2Q9UJZ1 356 aa19.89■□□□□ 0.77
SF3A1-202ENST00000411423 DNAH14Q0VDD8 3507 aa19.89■□□□□ 0.77
SF3A1-202ENST00000411423 GOLGA6L7A0A1B0GV03 622 aa19.88■□□□□ 0.77
SF3A1-202ENST00000411423 MED7O43513 233 aa19.88■□□□□ 0.77
SF3A1-202ENST00000411423 FBXO21O94952 628 aa19.88■□□□□ 0.77
SF3A1-202ENST00000411423 RETP07949 1114 aa19.88■□□□□ 0.77
SF3A1-202ENST00000411423 CHKAP35790 457 aa19.88■□□□□ 0.77
SF3A1-202ENST00000411423 KLK7P49862 253 aa19.88■□□□□ 0.77
SF3A1-202ENST00000411423 PITX1P78337 314 aaPredicted RBP19.88■□□□□ 0.77
SF3A1-202ENST00000411423 PDCLQ13371 301 aa19.88■□□□□ 0.77
SF3A1-202ENST00000411423 KLHDC7AQ5VTJ3 777 aa19.88■□□□□ 0.77
SF3A1-202ENST00000411423 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.88■□□□□ 0.77
SF3A1-202ENST00000411423 FRMD1Q8N878 549 aa19.88■□□□□ 0.77
SF3A1-202ENST00000411423 ADAM32Q8TC27 787 aa19.88■□□□□ 0.77
SF3A1-202ENST00000411423 DQX1Q8TE96 717 aaKnown RBP19.88■□□□□ 0.77
SF3A1-202ENST00000411423 STK32AQ8WU08 396 aa19.88■□□□□ 0.77
SF3A1-202ENST00000411423 RMDN1Q96DB5 314 aa19.88■□□□□ 0.77
SF3A1-202ENST00000411423 MYEOVQ96EZ4 313 aa19.88■□□□□ 0.77
SF3A1-202ENST00000411423 FAM81BQ96LP2 452 aa19.88■□□□□ 0.77
SF3A1-202ENST00000411423 CPXM1Q96SM3 734 aa19.88■□□□□ 0.77
SF3A1-202ENST00000411423 NAA15Q9BXJ9 866 aaKnown RBP19.88■□□□□ 0.77
SF3A1-202ENST00000411423 DUSP15Q9H1R2 295 aaPredicted RBP19.88■□□□□ 0.77
SF3A1-202ENST00000411423 PLCB1Q9NQ66 1216 aa19.88■□□□□ 0.77
SF3A1-202ENST00000411423 GMEB2Q9UKD1 530 aa19.88■□□□□ 0.77
SF3A1-202ENST00000411423 RAB23Q9ULC3 237 aa19.88■□□□□ 0.77
SF3A1-202ENST00000411423 MYO18AQ92614 2054 aaKnown RBP19.88■□□□□ 0.77
SF3A1-202ENST00000411423 A0A1W2PQF6 199 aa19.87■□□□□ 0.77
SF3A1-202ENST00000411423 NCAM1P13591 858 aa19.87■□□□□ 0.77
SF3A1-202ENST00000411423 BCKDHBP21953 392 aa19.87■□□□□ 0.77
SF3A1-202ENST00000411423 HOXD9P28356 352 aaPredicted RBP19.87■□□□□ 0.77
SF3A1-202ENST00000411423 SLC6A4P31645 630 aa19.87■□□□□ 0.77
SF3A1-202ENST00000411423 KRT31Q15323 416 aa19.87■□□□□ 0.77
SF3A1-202ENST00000411423 CCDC6Q16204 474 aa19.87■□□□□ 0.77
SF3A1-202ENST00000411423 PLK5Q496M5 336 aa19.87■□□□□ 0.77
SF3A1-202ENST00000411423 HSF5Q4G112 596 aaPredicted RBP19.87■□□□□ 0.77
SF3A1-202ENST00000411423 EOGTQ5NDL2 527 aa19.87■□□□□ 0.77
SF3A1-202ENST00000411423 NADSYN1Q6IA69 706 aa19.87■□□□□ 0.77
SF3A1-202ENST00000411423 KIAA1211LQ6NV74 962 aa19.87■□□□□ 0.77
SF3A1-202ENST00000411423 TAC4Q86UU9 113 aa19.87■□□□□ 0.77
SF3A1-202ENST00000411423 FAM71AQ8IYT1 594 aa19.87■□□□□ 0.77
SF3A1-202ENST00000411423 OLIG1Q8TAK6 271 aa19.87■□□□□ 0.77
SF3A1-202ENST00000411423 FCRL2Q96LA5 508 aaPredicted RBP19.87■□□□□ 0.77
SF3A1-202ENST00000411423 LSM14BQ9BX40 385 aaKnown RBP19.87■□□□□ 0.77
SF3A1-202ENST00000411423 VPS16Q9H269 839 aa19.87■□□□□ 0.77
SF3A1-202ENST00000411423 FANCLQ9NW38 375 aa19.87■□□□□ 0.77
SF3A1-202ENST00000411423 TMEM63CQ9P1W3 806 aa19.87■□□□□ 0.77
SF3A1-202ENST00000411423 PCDHGC3Q9UN70 934 aa19.87■□□□□ 0.77
SF3A1-202ENST00000411423 SLC27A6Q9Y2P4 619 aa19.87■□□□□ 0.77
SF3A1-202ENST00000411423 FAM170AA1A519 330 aa19.86■□□□□ 0.77
SF3A1-202ENST00000411423 WASH3PC4AMC7 463 aa19.86■□□□□ 0.77
SF3A1-202ENST00000411423 EEF1GP26641 437 aaKnown RBP19.86■□□□□ 0.77
SF3A1-202ENST00000411423 ACADSBP45954 432 aa19.86■□□□□ 0.77
SF3A1-202ENST00000411423 HARS2P49590 506 aaKnown RBP19.86■□□□□ 0.77
SF3A1-202ENST00000411423 DRAP1Q14919 205 aaPredicted RBP19.86■□□□□ 0.77
SF3A1-202ENST00000411423 FAM133BQ5BKY9 247 aaKnown RBP19.86■□□□□ 0.77
SF3A1-202ENST00000411423 TMEM215Q68D42 235 aa19.86■□□□□ 0.77
SF3A1-202ENST00000411423 RFWD3Q6PCD5 774 aa19.86■□□□□ 0.77
SF3A1-202ENST00000411423 CACNA2D4Q7Z3S7 1137 aa19.86■□□□□ 0.77
SF3A1-202ENST00000411423 C1orf131Q8NDD1 294 aaKnown RBP19.86■□□□□ 0.77
SF3A1-202ENST00000411423 RLN3Q8WXF3 142 aa19.86■□□□□ 0.77
SF3A1-202ENST00000411423 FAM149B1Q96BN6 582 aa19.86■□□□□ 0.77
SF3A1-202ENST00000411423 SLC39A13Q96H72 371 aa19.86■□□□□ 0.77
SF3A1-202ENST00000411423 ZC3H10Q96K80 434 aaKnown RBP19.86■□□□□ 0.77
SF3A1-202ENST00000411423 HSD3B7Q9H2F3 369 aa19.86■□□□□ 0.77
SF3A1-202ENST00000411423 CACNA2D2Q9NY47 1150 aa19.86■□□□□ 0.77
SF3A1-202ENST00000411423 XPO7Q9UIA9 1087 aaKnown RBP19.86■□□□□ 0.77
SF3A1-202ENST00000411423 RAD54BQ9Y620 910 aa19.86■□□□□ 0.77
SF3A1-202ENST00000411423 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.86■□□□□ 0.77
SF3A1-202ENST00000411423 TCRBV21S2A2A0A5A6 115 aa19.85■□□□□ 0.77
SF3A1-202ENST00000411423 PES1O00541 588 aaKnown RBP19.85■□□□□ 0.77
SF3A1-202ENST00000411423 EPHB6O15197 1021 aa19.85■□□□□ 0.77
SF3A1-202ENST00000411423 ERBB2P04626 1255 aa19.85■□□□□ 0.77
SF3A1-202ENST00000411423 NTSR1P30989 418 aa19.85■□□□□ 0.77
SF3A1-202ENST00000411423 TBX4P57082 545 aa19.85■□□□□ 0.77
SF3A1-202ENST00000411423 RAPGEF1Q13905 1077 aa19.85■□□□□ 0.77
SF3A1-202ENST00000411423 NCAPHQ15003 741 aa19.85■□□□□ 0.77
SF3A1-202ENST00000411423 PREPLQ4J6C6 727 aaPredicted RBP19.85■□□□□ 0.77
SF3A1-202ENST00000411423 WFDC5Q8TCV5 224 aa19.85■□□□□ 0.77
SF3A1-202ENST00000411423 KCNV2Q8TDN2 545 aa19.85■□□□□ 0.77
SF3A1-202ENST00000411423 DDI1Q8WTU0 396 aa19.85■□□□□ 0.77
SF3A1-202ENST00000411423 PRICKLE1Q96MT3 831 aaPredicted RBP19.85■□□□□ 0.77
SF3A1-202ENST00000411423 GANQ9H2C0 597 aa19.85■□□□□ 0.77
SF3A1-202ENST00000411423 ARRDC1-AS1Q9H2J1 176 aa19.85■□□□□ 0.77
SF3A1-202ENST00000411423 USP18Q9UMW8 372 aa19.85■□□□□ 0.77
SF3A1-202ENST00000411423 EPN2O95208 641 aa19.84■□□□□ 0.77
SF3A1-202ENST00000411423 LATS1O95835 1130 aa19.84■□□□□ 0.77
SF3A1-202ENST00000411423 IGLV3-25P01717 112 aa19.84■□□□□ 0.77
SF3A1-202ENST00000411423 HOXB2P14652 356 aa19.84■□□□□ 0.77
SF3A1-202ENST00000411423 UCHL3P15374 230 aa19.84■□□□□ 0.77
SF3A1-202ENST00000411423 GABRG2P18507 467 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms