RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 MED7O43513 233 aa18.48■□□□□ 0.55
LSM5-204ENST00000409909 LRP3O75074 770 aa18.48■□□□□ 0.55
LSM5-204ENST00000409909 USP8P40818 1118 aa18.48■□□□□ 0.55
LSM5-204ENST00000409909 WASP42768 502 aa18.48■□□□□ 0.55
LSM5-204ENST00000409909 HARS2P49590 506 aaKnown RBP18.48■□□□□ 0.55
LSM5-204ENST00000409909 MEA1Q16626 185 aa18.48■□□□□ 0.55
LSM5-204ENST00000409909 OLIG1Q8TAK6 271 aa18.48■□□□□ 0.55
LSM5-204ENST00000409909 STK32AQ8WU08 396 aa18.48■□□□□ 0.55
LSM5-204ENST00000409909 GBP4Q96PP9 640 aa18.48■□□□□ 0.55
LSM5-204ENST00000409909 ST7Q9NRC1 585 aa18.48■□□□□ 0.55
LSM5-204ENST00000409909 SEMA4GQ9NTN9 838 aa18.48■□□□□ 0.55
LSM5-204ENST00000409909 STOML2Q9UJZ1 356 aa18.48■□□□□ 0.55
LSM5-204ENST00000409909 SLC27A6Q9Y2P4 619 aa18.48■□□□□ 0.55
LSM5-204ENST00000409909 KCNJ18B7U540 433 aa18.47■□□□□ 0.55
LSM5-204ENST00000409909 GFRA2O00451 464 aa18.47■□□□□ 0.55
LSM5-204ENST00000409909 IGLV3-27P01718 113 aa18.47■□□□□ 0.55
LSM5-204ENST00000409909 PRKCSHP14314 528 aaPredicted RBP18.47■□□□□ 0.55
LSM5-204ENST00000409909 NTSR1P30989 418 aa18.47■□□□□ 0.55
LSM5-204ENST00000409909 KCNJ12Q14500 433 aa18.47■□□□□ 0.55
LSM5-204ENST00000409909 RSPO4Q2I0M5 234 aaPredicted RBP18.47■□□□□ 0.55
LSM5-204ENST00000409909 USP39Q53GS9 565 aaKnown RBP18.47■□□□□ 0.55
LSM5-204ENST00000409909 CT47A1Q5JQC4 288 aaPredicted RBP18.47■□□□□ 0.55
LSM5-204ENST00000409909 RBM43Q6ZSC3 357 aaKnown RBP18.47■□□□□ 0.55
LSM5-204ENST00000409909 TMEM110Q86TL2 294 aa18.47■□□□□ 0.55
LSM5-204ENST00000409909 WDTC1Q8N5D0 677 aa18.47■□□□□ 0.55
LSM5-204ENST00000409909 PIWIL1Q96J94 861 aaKnown RBP18.47■□□□□ 0.55
LSM5-204ENST00000409909 LOXL4Q96JB6 756 aa18.47■□□□□ 0.55
LSM5-204ENST00000409909 ARRDC1-AS1Q9H2J1 176 aa18.47■□□□□ 0.55
LSM5-204ENST00000409909 POLMQ9NP87 494 aaPredicted RBP18.47■□□□□ 0.55
LSM5-204ENST00000409909 DNAJC12Q9UKB3 198 aa18.47■□□□□ 0.55
LSM5-204ENST00000409909 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.47■□□□□ 0.55
LSM5-204ENST00000409909 A0A1W2PQF6 199 aa18.46■□□□□ 0.55
LSM5-204ENST00000409909 TCRBV21S2A2A0A5A6 115 aa18.46■□□□□ 0.55
LSM5-204ENST00000409909 FOXN3O00409 490 aaPredicted RBP18.46■□□□□ 0.55
LSM5-204ENST00000409909 PAPSS1O43252 624 aaPredicted RBP18.46■□□□□ 0.55
LSM5-204ENST00000409909 TSPAN3O60637 253 aa18.46■□□□□ 0.55
LSM5-204ENST00000409909 ALDH1A2O94788 518 aa18.46■□□□□ 0.55
LSM5-204ENST00000409909 EPN2O95208 641 aa18.46■□□□□ 0.55
LSM5-204ENST00000409909 ACADSBP45954 432 aa18.46■□□□□ 0.55
LSM5-204ENST00000409909 KCNMA1Q12791 1236 aa18.46■□□□□ 0.55
LSM5-204ENST00000409909 CCDC6Q16204 474 aa18.46■□□□□ 0.55
LSM5-204ENST00000409909 CSRP2Q16527 193 aa18.46■□□□□ 0.55
LSM5-204ENST00000409909 GEN1Q17RS7 908 aa18.46■□□□□ 0.55
LSM5-204ENST00000409909 TCP11X2Q5H9J9 407 aa18.46■□□□□ 0.55
LSM5-204ENST00000409909 ADGRF1Q5T601 910 aa18.46■□□□□ 0.55
LSM5-204ENST00000409909 TRMT11Q7Z4G4 463 aaKnown RBP18.46■□□□□ 0.55
LSM5-204ENST00000409909 DDI1Q8WTU0 396 aa18.46■□□□□ 0.55
LSM5-204ENST00000409909 HMGB4Q8WW32 186 aa18.46■□□□□ 0.55
LSM5-204ENST00000409909 CD248Q9HCU0 757 aa18.46■□□□□ 0.55
LSM5-204ENST00000409909 DLL3Q9NYJ7 618 aa18.46■□□□□ 0.55
LSM5-204ENST00000409909 TJP2Q9UDY2 1190 aa18.46■□□□□ 0.55
LSM5-204ENST00000409909 NAALADL1Q9UQQ1 740 aa18.46■□□□□ 0.55
LSM5-204ENST00000409909 E5RJQ4 531 aa18.45■□□□□ 0.54
LSM5-204ENST00000409909 CYBBP04839 570 aa18.45■□□□□ 0.54
LSM5-204ENST00000409909 PNMA6AP0CW24 399 aaPredicted RBP18.45■□□□□ 0.54
LSM5-204ENST00000409909 NCAM1P13591 858 aa18.45■□□□□ 0.54
LSM5-204ENST00000409909 BCKDHBP21953 392 aa18.45■□□□□ 0.54
LSM5-204ENST00000409909 CLCN1P35523 988 aa18.45■□□□□ 0.54
LSM5-204ENST00000409909 LMNB2Q03252 620 aa18.45■□□□□ 0.54
LSM5-204ENST00000409909 SYPL2Q5VXT5 272 aa18.45■□□□□ 0.54
LSM5-204ENST00000409909 KIAA1211LQ6NV74 962 aa18.45■□□□□ 0.54
LSM5-204ENST00000409909 CHPFQ8IZ52 775 aa18.45■□□□□ 0.54
LSM5-204ENST00000409909 FRMD1Q8N878 549 aa18.45■□□□□ 0.54
LSM5-204ENST00000409909 DQX1Q8TE96 717 aaKnown RBP18.45■□□□□ 0.54
LSM5-204ENST00000409909 RLN3Q8WXF3 142 aa18.45■□□□□ 0.54
LSM5-204ENST00000409909 GOLGA1Q92805 767 aa18.45■□□□□ 0.54
LSM5-204ENST00000409909 ERLEC1Q96DZ1 483 aa18.45■□□□□ 0.54
LSM5-204ENST00000409909 GABRG3Q99928 467 aa18.45■□□□□ 0.54
LSM5-204ENST00000409909 NFE2L3Q9Y4A8 694 aa18.45■□□□□ 0.54
LSM5-204ENST00000409909 GOLGA6L7A0A1B0GV03 622 aa18.44■□□□□ 0.54
LSM5-204ENST00000409909 WASH3PC4AMC7 463 aa18.44■□□□□ 0.54
LSM5-204ENST00000409909 LATS1O95835 1130 aa18.44■□□□□ 0.54
LSM5-204ENST00000409909 HOXB2P14652 356 aa18.44■□□□□ 0.54
LSM5-204ENST00000409909 HOXD9P28356 352 aaPredicted RBP18.44■□□□□ 0.54
LSM5-204ENST00000409909 GBP1P32455 592 aa18.44■□□□□ 0.54
LSM5-204ENST00000409909 P2RY2P41231 377 aa18.44■□□□□ 0.54
LSM5-204ENST00000409909 SGSHP51688 502 aa18.44■□□□□ 0.54
LSM5-204ENST00000409909 TBX4P57082 545 aa18.44■□□□□ 0.54
LSM5-204ENST00000409909 RING1Q06587 406 aa18.44■□□□□ 0.54
LSM5-204ENST00000409909 PDCLQ13371 301 aa18.44■□□□□ 0.54
LSM5-204ENST00000409909 TAF5Q15542 800 aa18.44■□□□□ 0.54
LSM5-204ENST00000409909 MPPE1Q53F39 396 aa18.44■□□□□ 0.54
LSM5-204ENST00000409909 PLA2G2CQ5R387 149 aa18.44■□□□□ 0.54
LSM5-204ENST00000409909 PRR23CQ6ZRP0 262 aa18.44■□□□□ 0.54
LSM5-204ENST00000409909 SLC47A2Q86VL8 602 aa18.44■□□□□ 0.54
LSM5-204ENST00000409909 ADAM32Q8TC27 787 aa18.44■□□□□ 0.54
LSM5-204ENST00000409909 ENOX1Q8TC92 643 aaKnown RBP18.44■□□□□ 0.54
LSM5-204ENST00000409909 FAM149B1Q96BN6 582 aa18.44■□□□□ 0.54
LSM5-204ENST00000409909 FCRL2Q96LA5 508 aaPredicted RBP18.44■□□□□ 0.54
LSM5-204ENST00000409909 SLC2A11Q9BYW1 496 aa18.44■□□□□ 0.54
LSM5-204ENST00000409909 CACNA2D2Q9NY47 1150 aa18.44■□□□□ 0.54
LSM5-204ENST00000409909 BCCIPQ9P287 314 aaKnown RBP eCLIP18.44■□□□□ 0.54
LSM5-204ENST00000409909 PCDHGC3Q9UN70 934 aa18.44■□□□□ 0.54
LSM5-204ENST00000409909 THADAQ6YHU6 1953 aa18.44■□□□□ 0.54
LSM5-204ENST00000409909 PRR5-ARHGAP8B1AHC4 643 aa18.43■□□□□ 0.54
LSM5-204ENST00000409909 SART1O43290 800 aaKnown RBP18.43■□□□□ 0.54
LSM5-204ENST00000409909 RHOBTB1O94844 696 aa18.43■□□□□ 0.54
LSM5-204ENST00000409909 GABRG2P18507 467 aa18.43■□□□□ 0.54
LSM5-204ENST00000409909 EEF1GP26641 437 aaKnown RBP18.43■□□□□ 0.54
LSM5-204ENST00000409909 SLC6A4P31645 630 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms