RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 MTCL1Q9Y4B5 1905 aaKnown RBP13.09□□□□□ -0.31
PMS1-204ENST00000409823 IRAK2O43187 625 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 TBX10O75333 385 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 PCK1P35558 622 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 HADHQ16836 314 aaKnown RBP13.09□□□□□ -0.31
PMS1-204ENST00000409823 SYCE2Q6PIF2 218 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 POTEHQ6S545 545 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 UBL4BQ8N7F7 174 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 GCNAQ96QF7 691 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 SNRNP25Q9BV90 132 aaKnown RBP13.09□□□□□ -0.31
PMS1-204ENST00000409823 SIK2Q9H0K1 926 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 SFXN1Q9H9B4 322 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 CLEC1BQ9P126 229 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 DNMT3LQ9UJW3 386 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 SAR1BQ9Y6B6 198 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 LRRD1A4D1F6 860 aa13.08□□□□□ -0.32
PMS1-204ENST00000409823 KIF2AO00139 706 aaPredicted RBP13.08□□□□□ -0.32
PMS1-204ENST00000409823 OAS1P00973 400 aaKnown RBP13.08□□□□□ -0.32
PMS1-204ENST00000409823 IGLV3-25P01717 112 aa13.08□□□□□ -0.32
PMS1-204ENST00000409823 HOXA9P31269 272 aa13.08□□□□□ -0.32
PMS1-204ENST00000409823 ACAP1Q15027 740 aa13.08□□□□□ -0.32
PMS1-204ENST00000409823 KCTD19Q17RG1 926 aaPredicted RBP13.08□□□□□ -0.32
PMS1-204ENST00000409823 ELMSAN1Q6PJG2 1045 aa13.08□□□□□ -0.32
PMS1-204ENST00000409823 SND1Q7KZF4 910 aaKnown RBP eCLIP13.08□□□□□ -0.32
PMS1-204ENST00000409823 BNIPLQ7Z465 357 aa13.08□□□□□ -0.32
PMS1-204ENST00000409823 OVCA2Q8WZ82 227 aa13.08□□□□□ -0.32
PMS1-204ENST00000409823 ZSWIM3Q96MP5 696 aa13.08□□□□□ -0.32
PMS1-204ENST00000409823 HEMGNQ9BXL5 484 aa13.08□□□□□ -0.32
PMS1-204ENST00000409823 SLC46A2Q9BY10 475 aa13.08□□□□□ -0.32
PMS1-204ENST00000409823 DHX35Q9H5Z1 703 aaKnown RBP13.08□□□□□ -0.32
PMS1-204ENST00000409823 CCDC66A2RUB6 948 aa13.08□□□□□ -0.32
PMS1-204ENST00000409823 MOSPD3O75425 235 aa13.08□□□□□ -0.32
PMS1-204ENST00000409823 KRT1P04264 644 aa13.08□□□□□ -0.32
PMS1-204ENST00000409823 MBL2P11226 248 aaPredicted RBP13.08□□□□□ -0.32
PMS1-204ENST00000409823 GBP1P32455 592 aa13.08□□□□□ -0.32
PMS1-204ENST00000409823 RWDD2BP57060 319 aa13.08□□□□□ -0.32
PMS1-204ENST00000409823 TBX4P57082 545 aa13.08□□□□□ -0.32
PMS1-204ENST00000409823 ADAM15Q13444 863 aa13.08□□□□□ -0.32
PMS1-204ENST00000409823 ODF2Q5BJF6 829 aa13.08□□□□□ -0.32
PMS1-204ENST00000409823 GPR158Q5T848 1215 aa13.08□□□□□ -0.32
PMS1-204ENST00000409823 SNX30Q5VWJ9 437 aa13.08□□□□□ -0.32
PMS1-204ENST00000409823 KCTD6Q8NC69 237 aa13.08□□□□□ -0.32
PMS1-204ENST00000409823 HDAC7Q8WUI4 952 aa13.08□□□□□ -0.32
PMS1-204ENST00000409823 WBP2Q969T9 261 aa13.08□□□□□ -0.32
PMS1-204ENST00000409823 SERPINB11Q96P15 392 aa13.08□□□□□ -0.32
PMS1-204ENST00000409823 GAS2L1Q99501 681 aaPredicted RBP13.08□□□□□ -0.32
PMS1-204ENST00000409823 CALN1Q9BXU9 219 aa13.08□□□□□ -0.32
PMS1-204ENST00000409823 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.08□□□□□ -0.32
PMS1-204ENST00000409823 MRPS23Q9Y3D9 190 aaKnown RBP13.08□□□□□ -0.32
PMS1-204ENST00000409823 CEP104O60308 925 aa13.07□□□□□ -0.32
PMS1-204ENST00000409823 ENDOD1O94919 500 aa13.07□□□□□ -0.32
PMS1-204ENST00000409823 CEBPBP17676 345 aa13.07□□□□□ -0.32
PMS1-204ENST00000409823 CDC25CP30307 473 aa13.07□□□□□ -0.32
PMS1-204ENST00000409823 AMPD2Q01433 879 aa13.07□□□□□ -0.32
PMS1-204ENST00000409823 MMRN1Q13201 1228 aa13.07□□□□□ -0.32
PMS1-204ENST00000409823 ERMARDQ5T6L9 678 aa13.07□□□□□ -0.32
PMS1-204ENST00000409823 PAPD7Q5XG87 772 aaKnown RBP13.07□□□□□ -0.32
PMS1-204ENST00000409823 KAZNQ674X7 775 aa13.07□□□□□ -0.32
PMS1-204ENST00000409823 ANKRD54Q6NXT1 300 aa13.07□□□□□ -0.32
PMS1-204ENST00000409823 BEND5Q7L4P6 421 aa13.07□□□□□ -0.32
PMS1-204ENST00000409823 AP4E1Q9UPM8 1137 aa13.07□□□□□ -0.32
PMS1-204ENST00000409823 CCL26Q9Y258 94 aa13.07□□□□□ -0.32
PMS1-204ENST00000409823 MIF4GDA9UHW6 222 aaKnown RBP13.07□□□□□ -0.32
PMS1-204ENST00000409823 FAM72CH0Y354 149 aa13.07□□□□□ -0.32
PMS1-204ENST00000409823 H3BQ06 376 aaPredicted RBP13.07□□□□□ -0.32
PMS1-204ENST00000409823 PSTPIP1O43586 416 aa13.07□□□□□ -0.32
PMS1-204ENST00000409823 KRT10P13645 584 aa13.07□□□□□ -0.32
PMS1-204ENST00000409823 SP100P23497 879 aaPredicted RBP13.07□□□□□ -0.32
PMS1-204ENST00000409823 CCR1P32246 355 aa13.07□□□□□ -0.32
PMS1-204ENST00000409823 CXCR3P49682 368 aa13.07□□□□□ -0.32
PMS1-204ENST00000409823 CDH6P55285 790 aa13.07□□□□□ -0.32
PMS1-204ENST00000409823 EIF4EBP2Q13542 120 aaPredicted RBP13.07□□□□□ -0.32
PMS1-204ENST00000409823 FAM72AQ5TYM5 149 aa13.07□□□□□ -0.32
PMS1-204ENST00000409823 FAM72DQ6L9T8 149 aa13.07□□□□□ -0.32
PMS1-204ENST00000409823 FAM72BQ86X60 149 aa13.07□□□□□ -0.32
PMS1-204ENST00000409823 PGAP3Q96FM1 320 aaPredicted RBP13.07□□□□□ -0.32
PMS1-204ENST00000409823 OLA1Q9NTK5 396 aaKnown RBP13.07□□□□□ -0.32
PMS1-204ENST00000409823 RRN3Q9NYV6 651 aa13.07□□□□□ -0.32
PMS1-204ENST00000409823 LCMT1Q9UIC8 334 aa13.07□□□□□ -0.32
PMS1-204ENST00000409823 CPQQ9Y646 472 aa13.07□□□□□ -0.32
PMS1-204ENST00000409823 TMEM265A0A087WTH1 108 aa13.06□□□□□ -0.32
PMS1-204ENST00000409823 CREB3O43889 395 aa13.06□□□□□ -0.32
PMS1-204ENST00000409823 ZRANB2O95218 330 aaKnown RBP eCLIP13.06□□□□□ -0.325e-9■□□□□ 10.7
PMS1-204ENST00000409823 C1RP00736 705 aa13.06□□□□□ -0.32
PMS1-204ENST00000409823 F9P00740 461 aa13.06□□□□□ -0.32
PMS1-204ENST00000409823 KRT7P08729 469 aa13.06□□□□□ -0.32
PMS1-204ENST00000409823 SRGAP2BP0DMP2 458 aa13.06□□□□□ -0.32
PMS1-204ENST00000409823 CTNNA2P26232 953 aa13.06□□□□□ -0.32
PMS1-204ENST00000409823 ADRA1BP35368 520 aa13.06□□□□□ -0.32
PMS1-204ENST00000409823 LTBRP36941 435 aa13.06□□□□□ -0.32
PMS1-204ENST00000409823 PPP3CCP48454 512 aa13.06□□□□□ -0.32
PMS1-204ENST00000409823 SKIV2LQ15477 1246 aaKnown RBP13.06□□□□□ -0.32
PMS1-204ENST00000409823 MSANTD2Q6P1R3 559 aa13.06□□□□□ -0.32
PMS1-204ENST00000409823 MFSD7Q6UXD7 560 aa13.06□□□□□ -0.32
PMS1-204ENST00000409823 RTL10Q7L3V2 364 aa13.06□□□□□ -0.32
PMS1-204ENST00000409823 GET4Q7L5D6 327 aaPredicted RBP13.06□□□□□ -0.32
PMS1-204ENST00000409823 DEFB123Q8N688 67 aa13.06□□□□□ -0.32
PMS1-204ENST00000409823 CDX2Q99626 313 aaPredicted RBP13.06□□□□□ -0.32
PMS1-204ENST00000409823 HERPUD2Q9BSE4 406 aa13.06□□□□□ -0.32
PMS1-204ENST00000409823 TLR6Q9Y2C9 796 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms