RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 HABP2Q14520 560 aaPredicted RBP6.85□□□□□ -1.31
LSM5-203ENST00000409782 B3GNT8Q7Z7M8 397 aa6.85□□□□□ -1.31
LSM5-203ENST00000409782 CLEC14AQ86T13 490 aa6.85□□□□□ -1.31
LSM5-203ENST00000409782 TMEFF1Q8IYR6 380 aa6.85□□□□□ -1.31
LSM5-203ENST00000409782 TXLNBQ8N3L3 684 aa6.85□□□□□ -1.31
LSM5-203ENST00000409782 GALNT15Q8N3T1 639 aa6.85□□□□□ -1.31
LSM5-203ENST00000409782 STPG3Q8N7X2 389 aa6.85□□□□□ -1.31
LSM5-203ENST00000409782 GIMAP8Q8ND71 665 aaPredicted RBP6.85□□□□□ -1.31
LSM5-203ENST00000409782 TRPV1Q8NER1 839 aa6.85□□□□□ -1.31
LSM5-203ENST00000409782 CCHCR1Q8TD31 782 aa6.85□□□□□ -1.31
LSM5-203ENST00000409782 MAML1Q92585 1016 aa6.85□□□□□ -1.31
LSM5-203ENST00000409782 LPPQ93052 612 aa6.85□□□□□ -1.31
LSM5-203ENST00000409782 UIMC1Q96RL1 719 aa6.85□□□□□ -1.31
LSM5-203ENST00000409782 UHRF1Q96T88 793 aaPredicted RBP6.85□□□□□ -1.31
LSM5-203ENST00000409782 TMEM47Q9BQJ4 181 aa6.85□□□□□ -1.31
LSM5-203ENST00000409782 KRT23Q9C075 422 aa6.85□□□□□ -1.31
LSM5-203ENST00000409782 RANBP17Q9H2T7 1088 aaKnown RBP6.85□□□□□ -1.31
LSM5-203ENST00000409782 C11orf49Q9H6J7 331 aa6.85□□□□□ -1.31
LSM5-203ENST00000409782 ACAD9Q9H845 621 aa6.85□□□□□ -1.31
LSM5-203ENST00000409782 RAVER2Q9HCJ3 691 aaKnown RBP6.85□□□□□ -1.31
LSM5-203ENST00000409782 PLXNA1Q9UIW2 1896 aa6.85□□□□□ -1.31
LSM5-203ENST00000409782 PFASO15067 1338 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 ZNF536O15090 1300 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 WDR19Q8NEZ3 1342 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 DNM1LO00429 736 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 DAPK3O43293 454 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 KLHL18O94889 574 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 MT-ND5P03915 603 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 ICAM1P05362 532 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 PGK2P07205 417 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 ITGA5P08648 1049 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 GYPEP15421 78 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 KLRC1P26715 233 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 ETV4P43268 484 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 LIMS1P48059 325 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 GLRBP48167 497 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 ITGA1P56199 1179 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 ADAM9Q13443 819 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 SPARCL1Q14515 664 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 KRTAP19-4Q3LI73 84 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 BMP2KLQ5H9B9 411 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 GPATCH4Q5T3I0 446 aaKnown RBP6.84□□□□□ -1.31
LSM5-203ENST00000409782 TCERG1LQ5VWI1 586 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 RASGRP2Q7LDG7 609 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 OTOP2Q7RTS6 562 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 MICU3Q86XE3 530 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 PLXDC1Q8IUK5 500 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 LILRA3Q8N6C8 439 aaPredicted RBP6.84□□□□□ -1.31
LSM5-203ENST00000409782 FAM71BQ8TC56 605 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 RAB24Q969Q5 203 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 EID2BQ96D98 161 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 ZSCAN31Q96LW9 406 aaPredicted RBP6.84□□□□□ -1.31
LSM5-203ENST00000409782 PWWP2AQ96N64 755 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 HEPHQ9BQS7 1158 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 UBAC1Q9BSL1 405 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 SENP6Q9GZR1 1112 aaPredicted RBP6.84□□□□□ -1.31
LSM5-203ENST00000409782 JADE2Q9NQC1 790 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 RNF146Q9NTX7 359 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 CNPY2Q9Y2B0 182 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 RIPK3Q9Y572 518 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 SLC4A7Q9Y6M7 1214 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 LRRC37A2A6NM11 1700 aa6.84□□□□□ -1.31
LSM5-203ENST00000409782 ALPK3Q96L96 1907 aa6.84□□□□□ -1.32
LSM5-203ENST00000409782 H0Y858 1186 aa6.83□□□□□ -1.32
LSM5-203ENST00000409782 H0YGN5 161 aa6.83□□□□□ -1.32
LSM5-203ENST00000409782 MATN4O95460 622 aa6.83□□□□□ -1.32
LSM5-203ENST00000409782 ABHD16AO95870 558 aa6.83□□□□□ -1.32
LSM5-203ENST00000409782 ZSCAN22P10073 491 aaPredicted RBP6.83□□□□□ -1.32
LSM5-203ENST00000409782 RARBP10826 455 aa6.83□□□□□ -1.32
LSM5-203ENST00000409782 AKR1A1P14550 325 aa6.83□□□□□ -1.32
LSM5-203ENST00000409782 HNRNPLP14866 589 aaKnown RBP eCLIP6.83□□□□□ -1.32
LSM5-203ENST00000409782 MC3RP41968 323 aa6.83□□□□□ -1.32
LSM5-203ENST00000409782 AFF3P51826 1226 aaKnown RBP6.83□□□□□ -1.32
LSM5-203ENST00000409782 TRDNQ13061 729 aa6.83□□□□□ -1.32
LSM5-203ENST00000409782 RAB32Q13637 225 aa6.83□□□□□ -1.32
LSM5-203ENST00000409782 POSTNQ15063 836 aa6.83□□□□□ -1.32
LSM5-203ENST00000409782 ASPRV1Q53RT3 343 aa6.83□□□□□ -1.32
LSM5-203ENST00000409782 C3orf38Q5JPI3 329 aa6.83□□□□□ -1.32
LSM5-203ENST00000409782 FBXO47Q5MNV8 452 aa6.83□□□□□ -1.32
LSM5-203ENST00000409782 L1TD1Q5T7N2 865 aaKnown RBP6.83□□□□□ -1.32
LSM5-203ENST00000409782 LCE3BQ5TA77 95 aa6.83□□□□□ -1.32
LSM5-203ENST00000409782 TRIM68Q6AZZ1 485 aa6.83□□□□□ -1.32
LSM5-203ENST00000409782 RETSATQ6NUM9 610 aa6.83□□□□□ -1.32
LSM5-203ENST00000409782 USP17L6PQ6QN14 398 aa6.83□□□□□ -1.32
LSM5-203ENST00000409782 MAMDC4Q6UXC1 1216 aa6.83□□□□□ -1.32
LSM5-203ENST00000409782 KRBA2Q6ZNG9 492 aa6.83□□□□□ -1.32
LSM5-203ENST00000409782 RSRC2Q7L4I2 434 aaKnown RBP6.83□□□□□ -1.32
LSM5-203ENST00000409782 ZNF572Q7Z3I7 529 aaPredicted RBP6.83□□□□□ -1.32
LSM5-203ENST00000409782 MAATS1Q7Z4T9 603 aa6.83□□□□□ -1.32
LSM5-203ENST00000409782 ANKRD35Q8N283 1001 aa6.83□□□□□ -1.32
LSM5-203ENST00000409782 CELF5Q8N6W0 485 aaKnown RBP6.83□□□□□ -1.32
LSM5-203ENST00000409782 FAM133AQ8N9E0 248 aa6.83□□□□□ -1.32
LSM5-203ENST00000409782 SLC30A5Q8TAD4 765 aa6.83□□□□□ -1.32
LSM5-203ENST00000409782 IPCEF1Q8WWN9 437 aaPredicted RBP6.83□□□□□ -1.32
LSM5-203ENST00000409782 MUL1Q969V5 352 aa6.83□□□□□ -1.32
LSM5-203ENST00000409782 KAT14Q9H8E8 782 aa6.83□□□□□ -1.32
LSM5-203ENST00000409782 OBP2BQ9NPH6 170 aa6.83□□□□□ -1.32
LSM5-203ENST00000409782 A1CFQ9NQ94 594 aaKnown RBP6.83□□□□□ -1.32
LSM5-203ENST00000409782 TLR9Q9NR96 1032 aa6.83□□□□□ -1.32
LSM5-203ENST00000409782 SACM1LQ9NTJ5 587 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms