RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 CD300LGQ6UXG3 332 aa20.83■□□□□ 0.93
USP39-204ENST00000409766 CAND1Q86VP6 1230 aaKnown RBP20.83■□□□□ 0.93
USP39-204ENST00000409766 CCDC33Q8N5R6 958 aa20.83■□□□□ 0.93
USP39-204ENST00000409766 PCSK9Q8NBP7 692 aaKnown RBP20.83■□□□□ 0.93
USP39-204ENST00000409766 CCDC197Q8NCU1 140 aa20.83■□□□□ 0.93
USP39-204ENST00000409766 DENND1AQ8TEH3 1009 aa20.83■□□□□ 0.93
USP39-204ENST00000409766 RNF139Q8WU17 664 aa20.83■□□□□ 0.93
USP39-204ENST00000409766 NSRP1Q9H0G5 558 aaKnown RBP20.83■□□□□ 0.93
USP39-204ENST00000409766 TRMT13Q9NUP7 481 aaKnown RBP20.83■□□□□ 0.93
USP39-204ENST00000409766 COX16Q9P0S2 106 aa20.83■□□□□ 0.93
USP39-204ENST00000409766 A0A1W2PPM1 405 aa20.83■□□□□ 0.92
USP39-204ENST00000409766 KBTBD13C9JR72 458 aa20.83■□□□□ 0.92
USP39-204ENST00000409766 SPAG7O75391 227 aa20.83■□□□□ 0.92
USP39-204ENST00000409766 B3GAT3O94766 335 aa20.83■□□□□ 0.92
USP39-204ENST00000409766 METTL18O95568 372 aa20.83■□□□□ 0.92
USP39-204ENST00000409766 ODC1P11926 461 aa20.83■□□□□ 0.92
USP39-204ENST00000409766 WDR4P57081 412 aaKnown RBP20.83■□□□□ 0.92
USP39-204ENST00000409766 NME3Q13232 169 aa20.83■□□□□ 0.92
USP39-204ENST00000409766 FAM26DQ5JW98 314 aa20.83■□□□□ 0.92
USP39-204ENST00000409766 DCAKDQ8WVC6 231 aa20.83■□□□□ 0.92
USP39-204ENST00000409766 SMARCD1Q96GM5 515 aa20.83■□□□□ 0.92
USP39-204ENST00000409766 SMC6Q96SB8 1091 aa20.83■□□□□ 0.92
USP39-204ENST00000409766 SLC9A7Q96T83 725 aa20.83■□□□□ 0.92
USP39-204ENST00000409766 ELAC2Q9BQ52 826 aaKnown RBP20.83■□□□□ 0.92
USP39-204ENST00000409766 CSNK1G1Q9HCP0 422 aa20.83■□□□□ 0.92
USP39-204ENST00000409766 SMG5Q9UPR3 1016 aaKnown RBP20.83■□□□□ 0.92
USP39-204ENST00000409766 THSD7BQ9C0I4 1608 aa20.83■□□□□ 0.92
USP39-204ENST00000409766 TCRBV9S1A1TA0A576 114 aa20.82■□□□□ 0.92
USP39-204ENST00000409766 HACD1B0YJ81 288 aa20.82■□□□□ 0.92
USP39-204ENST00000409766 C9IYK1 514 aa20.82■□□□□ 0.92
USP39-204ENST00000409766 SPAG6O75602 509 aa20.82■□□□□ 0.92
USP39-204ENST00000409766 CYP11A1P05108 521 aa20.82■□□□□ 0.92
USP39-204ENST00000409766 ITGA7Q13683 1181 aa20.82■□□□□ 0.92
USP39-204ENST00000409766 HEATR6Q6AI08 1181 aaKnown RBP20.82■□□□□ 0.92
USP39-204ENST00000409766 BZW1Q7L1Q6 419 aaKnown RBP20.82■□□□□ 0.92
USP39-204ENST00000409766 VPS52Q8N1B4 723 aa20.82■□□□□ 0.92
USP39-204ENST00000409766 MCUQ8NE86 351 aa20.82■□□□□ 0.92
USP39-204ENST00000409766 TFB1MQ8WVM0 346 aaKnown RBP20.82■□□□□ 0.92
USP39-204ENST00000409766 PGBD4Q96DM1 585 aa20.82■□□□□ 0.92
USP39-204ENST00000409766 MAGEB18Q96M61 343 aa20.82■□□□□ 0.92
USP39-204ENST00000409766 CYTH2Q99418 400 aa20.82■□□□□ 0.92
USP39-204ENST00000409766 SAMD15Q9P1V8 674 aa20.82■□□□□ 0.92
USP39-204ENST00000409766 H3BRJ5 948 aa20.82■□□□□ 0.92
USP39-204ENST00000409766 CAPN9O14815 690 aa20.82■□□□□ 0.92
USP39-204ENST00000409766 ASMTLO95671 621 aa20.82■□□□□ 0.92
USP39-204ENST00000409766 USP17L7P0C7H9 530 aa20.82■□□□□ 0.92
USP39-204ENST00000409766 GRIK3Q13003 919 aa20.82■□□□□ 0.92
USP39-204ENST00000409766 PAN2Q504Q3 1202 aaKnown RBP20.82■□□□□ 0.92
USP39-204ENST00000409766 RNF187Q5TA31 235 aaPredicted RBP20.82■□□□□ 0.92
USP39-204ENST00000409766 FAM171BQ6P995 826 aa20.82■□□□□ 0.92
USP39-204ENST00000409766 C4orf33Q8N1A6 199 aa20.82■□□□□ 0.92
USP39-204ENST00000409766 SLC7A14Q8TBB6 771 aa20.82■□□□□ 0.92
USP39-204ENST00000409766 MZB1Q8WU39 189 aa20.82■□□□□ 0.92
USP39-204ENST00000409766 ACBD6Q9BR61 282 aa20.82■□□□□ 0.92
USP39-204ENST00000409766 WDR6Q9NNW5 1121 aaKnown RBP20.82■□□□□ 0.92
USP39-204ENST00000409766 TYROBPO43914 113 aa20.81■□□□□ 0.92
USP39-204ENST00000409766 MFSD11O43934 449 aa20.81■□□□□ 0.92
USP39-204ENST00000409766 VAV1P15498 845 aa20.81■□□□□ 0.92
USP39-204ENST00000409766 MSH2P43246 934 aa20.81■□□□□ 0.92
USP39-204ENST00000409766 BRCC3P46736 316 aa20.81■□□□□ 0.92
USP39-204ENST00000409766 TUSC3Q13454 348 aa20.81■□□□□ 0.92
USP39-204ENST00000409766 ITIH4Q14624 930 aa20.81■□□□□ 0.92
USP39-204ENST00000409766 BHLHA9Q7RTU4 235 aa20.81■□□□□ 0.92
USP39-204ENST00000409766 ANKS4BQ8N8V4 417 aa20.81■□□□□ 0.92
USP39-204ENST00000409766 HTR3CQ8WXA8 447 aa20.81■□□□□ 0.92
USP39-204ENST00000409766 MYLPFQ96A32 169 aa20.81■□□□□ 0.92
USP39-204ENST00000409766 RHOBTB2Q9BYZ6 727 aa20.81■□□□□ 0.92
USP39-204ENST00000409766 PNPLA8Q9NP80 782 aa20.81■□□□□ 0.92
USP39-204ENST00000409766 FGFR1OP2Q9NVK5 253 aa20.81■□□□□ 0.92
USP39-204ENST00000409766 SF3B1O75533 1304 aaKnown RBP eCLIP20.81■□□□□ 0.923e-9■■■■■ 206.8
USP39-204ENST00000409766 M0QZQ0 153 aa20.8■□□□□ 0.92
USP39-204ENST00000409766 SNX3O60493 162 aa20.8■□□□□ 0.92
USP39-204ENST00000409766 TPSB2P20231 275 aa20.8■□□□□ 0.92
USP39-204ENST00000409766 IBSPP21815 317 aaPredicted RBP20.8■□□□□ 0.92
USP39-204ENST00000409766 ADRA1BP35368 520 aa20.8■□□□□ 0.92
USP39-204ENST00000409766 MAGEA3P43357 314 aa20.8■□□□□ 0.92
USP39-204ENST00000409766 AIF1P55008 147 aa20.8■□□□□ 0.92
USP39-204ENST00000409766 YWHAGP61981 247 aaKnown RBP eCLIP20.8■□□□□ 0.92
USP39-204ENST00000409766 IL9RQ01113 521 aa20.8■□□□□ 0.92
USP39-204ENST00000409766 SP3Q02447 781 aa20.8■□□□□ 0.92
USP39-204ENST00000409766 NOGQ13253 232 aa20.8■□□□□ 0.92
USP39-204ENST00000409766 DPYSQ14117 519 aa20.8■□□□□ 0.92
USP39-204ENST00000409766 TPSAB1Q15661 275 aa20.8■□□□□ 0.92
USP39-204ENST00000409766 NUGGCQ68CJ6 796 aa20.8■□□□□ 0.92
USP39-204ENST00000409766 ADAM32Q8TC27 787 aa20.8■□□□□ 0.92
USP39-204ENST00000409766 NTAN1Q96AB6 310 aa20.8■□□□□ 0.92
USP39-204ENST00000409766 PGAP3Q96FM1 320 aaPredicted RBP20.8■□□□□ 0.92
USP39-204ENST00000409766 TGS1Q96RS0 853 aaKnown RBP20.8■□□□□ 0.92
USP39-204ENST00000409766 LGMNQ99538 433 aa20.8■□□□□ 0.92
USP39-204ENST00000409766 SSU72Q9NP77 194 aaKnown RBP20.8■□□□□ 0.92
USP39-204ENST00000409766 NOD1Q9Y239 953 aa20.8■□□□□ 0.92
USP39-204ENST00000409766 GOLGA6L7A0A1B0GV03 622 aa20.8■□□□□ 0.92
USP39-204ENST00000409766 CREB3O43889 395 aa20.8■□□□□ 0.92
USP39-204ENST00000409766 AOC2O75106 756 aa20.8■□□□□ 0.92
USP39-204ENST00000409766 OAS1P00973 400 aaKnown RBP20.8■□□□□ 0.92
USP39-204ENST00000409766 LTFP02788 710 aa20.8■□□□□ 0.92
USP39-204ENST00000409766 SKIP12755 728 aa20.8■□□□□ 0.92
USP39-204ENST00000409766 NCAM1P13591 858 aa20.8■□□□□ 0.92
USP39-204ENST00000409766 RPA3P35244 121 aaPredicted RBP20.8■□□□□ 0.92
USP39-204ENST00000409766 LIG3P49916 1009 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms