RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 CRTAMO95727 393 aa8.63□□□□□ -1.03
SCN9A-203ENST00000409672 PCCBP05166 539 aa8.63□□□□□ -1.03
SCN9A-203ENST00000409672 ICAM1P05362 532 aa8.63□□□□□ -1.03
SCN9A-203ENST00000409672 ITGALP20701 1170 aa8.63□□□□□ -1.03
SCN9A-203ENST00000409672 RPS12P25398 132 aaKnown RBP8.63□□□□□ -1.03
SCN9A-203ENST00000409672 SERPINB10P48595 397 aa8.63□□□□□ -1.03
SCN9A-203ENST00000409672 BCL2L1Q07817 233 aa8.63□□□□□ -1.03
SCN9A-203ENST00000409672 UGP2Q16851 508 aa8.63□□□□□ -1.03
SCN9A-203ENST00000409672 ZCCHC8Q6NZY4 707 aaKnown RBP8.63□□□□□ -1.03
SCN9A-203ENST00000409672 MICU2Q8IYU8 434 aa8.63□□□□□ -1.03
SCN9A-203ENST00000409672 PAK5Q9P286 719 aa8.63□□□□□ -1.03
SCN9A-203ENST00000409672 BICRAQ9NZM4 1560 aa8.63□□□□□ -1.03
SCN9A-203ENST00000409672 GTPBP1O00178 669 aaKnown RBP8.63□□□□□ -1.03
SCN9A-203ENST00000409672 UCHL3P15374 230 aa8.63□□□□□ -1.03
SCN9A-203ENST00000409672 ZNF23P17027 643 aa8.63□□□□□ -1.03
SCN9A-203ENST00000409672 SLC1A1P43005 524 aa8.63□□□□□ -1.03
SCN9A-203ENST00000409672 CNTN2Q02246 1040 aa8.63□□□□□ -1.03
SCN9A-203ENST00000409672 C11orf63Q6NUN7 778 aa8.63□□□□□ -1.03
SCN9A-203ENST00000409672 FIBCD1Q8N539 461 aa8.63□□□□□ -1.03
SCN9A-203ENST00000409672 FEM1CQ96JP0 617 aa8.63□□□□□ -1.03
SCN9A-203ENST00000409672 HTATIP2Q9BUP3 242 aa8.63□□□□□ -1.03
SCN9A-203ENST00000409672 FAM50BQ9Y247 325 aa8.63□□□□□ -1.03
SCN9A-203ENST00000409672 USP1O94782 785 aa8.63□□□□□ -1.03
SCN9A-203ENST00000409672 MPZL3Q6UWV2 235 aa8.63□□□□□ -1.03
SCN9A-203ENST00000409672 ISLR2Q6UXK2 745 aa8.63□□□□□ -1.03
SCN9A-203ENST00000409672 SIRT2Q8IXJ6 389 aa8.63□□□□□ -1.03
SCN9A-203ENST00000409672 GUF1Q8N442 669 aaKnown RBP8.63□□□□□ -1.03
SCN9A-203ENST00000409672 RERGQ96A58 199 aaPredicted RBP8.63□□□□□ -1.03
SCN9A-203ENST00000409672 TBCDQ9BTW9 1192 aa8.63□□□□□ -1.03
SCN9A-203ENST00000409672 UBTFL6P0CB48 400 aaPredicted RBP8.63□□□□□ -1.03
SCN9A-203ENST00000409672 RNF19BQ6ZMZ0 732 aa8.63□□□□□ -1.03
SCN9A-203ENST00000409672 CCDC149Q6ZUS6 474 aa8.63□□□□□ -1.03
SCN9A-203ENST00000409672 NRKQ7Z2Y5 1582 aa8.63□□□□□ -1.03
SCN9A-203ENST00000409672 SMPDL3BQ92485 455 aa8.63□□□□□ -1.03
SCN9A-203ENST00000409672 SEPHS2Q99611 448 aa8.63□□□□□ -1.03
SCN9A-203ENST00000409672 TMEM121Q9BTD3 319 aa8.63□□□□□ -1.03
SCN9A-203ENST00000409672 MAT2BQ9NZL9 334 aa8.63□□□□□ -1.03
SCN9A-203ENST00000409672 SPATA2Q9UM82 520 aa8.63□□□□□ -1.03
SCN9A-203ENST00000409672 NEDD8-MDP1E9PL57 170 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 OR6B1O95007 311 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 DLGAP3O95886 979 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 FAM86B2P0C5J1 330 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 MYL6P60660 151 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 COX10Q12887 443 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 CAMK1Q14012 370 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 SPIDRQ14159 915 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 C15orf59Q2T9L4 293 aaPredicted RBP8.62□□□□□ -1.03
SCN9A-203ENST00000409672 CYP4Z1Q86W10 505 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 PIGKQ92643 395 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 CNPPD1Q9BV87 410 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 DPY30Q9C005 99 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 OSER1Q9NX31 292 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 HES2Q9Y543 173 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 USP27XA6NNY8 438 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 ISM1B1AKI9 464 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 ANXA11P50995 505 aaKnown RBP8.62□□□□□ -1.03
SCN9A-203ENST00000409672 ATP2C1P98194 919 aaPredicted RBP8.62□□□□□ -1.03
SCN9A-203ENST00000409672 C16orf89Q6UX73 402 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 LINC00523Q86TU6 105 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 STAMBPL1Q96FJ0 436 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 MYLK2Q9H1R3 596 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 LCMT1Q9UIC8 334 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 NCAPD2Q15021 1401 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 FKTNO75072 461 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 CAMTA2O94983 1202 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 ALBP02768 609 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 CFIP05156 583 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 CYP2A7P20853 494 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 LHX1P48742 406 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 GEMP55040 296 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 STXBP1P61764 594 aaKnown RBP8.62□□□□□ -1.03
SCN9A-203ENST00000409672 CBFBQ13951 182 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 STILQ15468 1287 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 CNSTQ6PJW8 725 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 PRSS58Q8IYP2 241 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 AHI1Q8N157 1196 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 ARHGAP9Q9BRR9 750 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 IRX2Q9BZI1 471 aaPredicted RBP8.62□□□□□ -1.03
SCN9A-203ENST00000409672 WWP1Q9H0M0 922 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 PHF2O75151 1096 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 CTPS1P17812 591 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 NFYCQ13952 458 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 MILR1Q7Z6M3 343 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 TP53INP1Q96A56 240 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 GAD1Q99259 594 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 KIFC1Q9BW19 673 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 PLK2Q9NYY3 685 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 ZNF112Q9UJU3 913 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 ADGRL2O95490 1459 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 HECW2Q9P2P5 1572 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 GAS2O43903 313 aaKnown RBP8.62□□□□□ -1.03
SCN9A-203ENST00000409672 PSEN2P49810 448 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 TTC7BQ86TV6 843 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 LNX2Q8N448 690 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 EFCAB3Q8N7B9 438 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 FAM111AQ96PZ2 611 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 LRRC4BQ9NT99 713 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 NOP53Q9NZM5 478 aaKnown RBP8.62□□□□□ -1.03
SCN9A-203ENST00000409672 WDR35Q9P2L0 1181 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 AAR2Q9Y312 384 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms