RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 AGGF1Q8N302 714 aaeCLIP17.28■□□□□ 0.36
PCDHA13-202ENST00000409494 SKA1Q96BD8 255 aa17.28■□□□□ 0.36
PCDHA13-202ENST00000409494 BTBD7Q9P203 1132 aa17.28■□□□□ 0.36
PCDHA13-202ENST00000409494 ZNF510Q9Y2H8 683 aa17.28■□□□□ 0.36
PCDHA13-202ENST00000409494 RAD54BQ9Y620 910 aa17.28■□□□□ 0.36
PCDHA13-202ENST00000409494 ANGPT2O15123 496 aa17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 SYF2O95926 243 aaKnown RBP17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 PDHA1P08559 390 aa17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 BDNFP23560 247 aa17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 CDH8P55286 799 aa17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 MKRN4PQ13434 485 aaPredicted RBP17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 HSDL1Q3SXM5 330 aa17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 ATXN7L3BQ96GX2 97 aa17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 C2orf49Q9BVC5 232 aaPredicted RBP17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 RIPK3Q9Y572 518 aa17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 PRPF4O43172 522 aaKnown RBP eCLIP17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 ARF4P18085 180 aaPredicted RBP17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 HNRNPH3P31942 346 aaKnown RBP17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 MGAT5Q09328 741 aa17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 CAPRIN1Q14444 709 aaKnown RBP17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 WDR59Q6PJI9 974 aa17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 MBOAT7Q96N66 472 aa17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 DEFB118Q96PH6 123 aa17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 CHORDC1Q9UHD1 332 aaPredicted RBP17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 DDX20Q9UHI6 824 aaKnown RBP17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 DNMT3LQ9UJW3 386 aa17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 FAM50BQ9Y247 325 aa17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 TRAV19A0A0A6YYK7 116 aa17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 ADRB2P07550 413 aa17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 NFICP08651 508 aa17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 OR1E1P30953 314 aa17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 CD52P31358 61 aa17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 C4orf33Q8N1A6 199 aa17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 NRBF2Q96F24 287 aa17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 C1QTNF7Q9BXJ2 289 aa17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 CIPCQ9C0C6 399 aa17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 PDGFDQ9GZP0 370 aaPredicted RBP17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 HIPK3Q9H422 1215 aa17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 PCMTD2Q9NV79 361 aa17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 ARHGAP28Q9P2N2 729 aa17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 FAF1Q9UNN5 650 aaPredicted RBP17.27■□□□□ 0.36
PCDHA13-202ENST00000409494 SUPT3HB4E1H0 165 aa17.27■□□□□ 0.35
PCDHA13-202ENST00000409494 GOLGA8TH3BQL2 631 aa17.27■□□□□ 0.35
PCDHA13-202ENST00000409494 OPLAHO14841 1288 aa17.27■□□□□ 0.35
PCDHA13-202ENST00000409494 CAND2O75155 1236 aa17.27■□□□□ 0.35
PCDHA13-202ENST00000409494 SRP72O76094 671 aaKnown RBP17.27■□□□□ 0.35
PCDHA13-202ENST00000409494 CYP2A6P11509 494 aaPredicted RBP17.27■□□□□ 0.35
PCDHA13-202ENST00000409494 KRT80Q6KB66 452 aa17.27■□□□□ 0.35
PCDHA13-202ENST00000409494 VSTM1Q6UX27 236 aa17.27■□□□□ 0.35
PCDHA13-202ENST00000409494 AENQ8WTP8 325 aaKnown RBP17.27■□□□□ 0.35
PCDHA13-202ENST00000409494 HDAC7Q8WUI4 952 aa17.27■□□□□ 0.35
PCDHA13-202ENST00000409494 HTR3CQ8WXA8 447 aa17.27■□□□□ 0.35
PCDHA13-202ENST00000409494 CCDC138Q96M89 665 aa17.27■□□□□ 0.35
PCDHA13-202ENST00000409494 ZNF214Q9UL59 606 aaPredicted RBP17.27■□□□□ 0.35
PCDHA13-202ENST00000409494 SLC39A10Q9ULF5 831 aa17.27■□□□□ 0.35
PCDHA13-202ENST00000409494 CCDC195A0A1B0GUA6 201 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 ARL2P36404 184 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 CASP5P51878 434 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 ZNF143P52747 638 aaPredicted RBP17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 PPIGQ13427 754 aaKnown RBP eCLIP17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 DNAL1Q4LDG9 190 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 POLNQ7Z5Q5 900 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 SLC26A11Q86WA9 606 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 CREG2Q8IUH2 290 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 OSCP1Q8WVF1 389 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 CMTM5Q96DZ9 223 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 CBX4O00257 560 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 MGEA5O60502 916 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 GLP2RO95838 553 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 CCNE2O96020 404 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 PRKAA2P54646 552 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 COLGALT1Q8NBJ5 622 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 ASAH2Q9NR71 780 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 SLCO1B7G3V0H7 640 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 STMN1P16949 149 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 CES1P23141 567 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 IL1RL1Q01638 556 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 NUP93Q8N1F7 819 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 CSGALNACT1Q8TDX6 532 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 LZICQ8WZA0 190 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 ERP27Q96DN0 273 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 SUDS3Q9H7L9 328 aaPredicted RBP17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 GIMAP4Q9NUV9 329 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 GPATCH2LQ9NWQ4 482 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 CLUHO75153 1309 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 TRIM49D1C9J1S8 452 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 E5RJQ4 531 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 GOLGA8RI6L899 631 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 AP2B1P63010 937 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 IL17AQ16552 155 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 LRRC34Q8IZ02 419 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 E2F7Q96AV8 911 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 LHX5Q9H2C1 402 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 SMYD3Q9H7B4 428 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 PCDHGC5Q9Y5F6 944 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 DLG5Q8TDM6 1919 aa17.26■□□□□ 0.35
PCDHA13-202ENST00000409494 CYP1A2P05177 515 aa17.25■□□□□ 0.35
PCDHA13-202ENST00000409494 GJC2Q5T442 439 aaPredicted RBP17.25■□□□□ 0.35
PCDHA13-202ENST00000409494 ILDR2Q71H61 639 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms