RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 AAASQ9NRG9 546 aa14.59□□□□□ -0.07
GPNMB-203ENST00000409458 AFF4Q9UHB7 1163 aaKnown RBP14.59□□□□□ -0.07
GPNMB-203ENST00000409458 ASIC3Q9UHC3 531 aa14.59□□□□□ -0.07
GPNMB-203ENST00000409458 SFMBT1Q9UHJ3 866 aa14.59□□□□□ -0.07
GPNMB-203ENST00000409458 FEZ2Q9UHY8 353 aaPredicted RBP14.59□□□□□ -0.07
GPNMB-203ENST00000409458 ZNF148Q9UQR1 794 aa14.59□□□□□ -0.07
GPNMB-203ENST00000409458 DRG1Q9Y295 367 aaKnown RBP14.59□□□□□ -0.07
GPNMB-203ENST00000409458 PCDHB12Q9Y5F1 795 aa14.59□□□□□ -0.07
GPNMB-203ENST00000409458 SLC38A8A6NNN8 435 aa14.58□□□□□ -0.07
GPNMB-203ENST00000409458 MAP2K7O14733 419 aa14.58□□□□□ -0.07
GPNMB-203ENST00000409458 MSI1O43347 362 aaKnown RBP14.58□□□□□ -0.07
GPNMB-203ENST00000409458 FGF18O76093 207 aa14.58□□□□□ -0.07
GPNMB-203ENST00000409458 ABLIM3O94929 683 aa14.58□□□□□ -0.07
GPNMB-203ENST00000409458 ITGAVP06756 1048 aa14.58□□□□□ -0.07
GPNMB-203ENST00000409458 KLRC2P26717 231 aa14.58□□□□□ -0.07
GPNMB-203ENST00000409458 EIF3EP60228 445 aaKnown RBP14.58□□□□□ -0.07
GPNMB-203ENST00000409458 CASP8Q14790 479 aa14.58□□□□□ -0.07
GPNMB-203ENST00000409458 GSTA5Q7RTV2 222 aa14.58□□□□□ -0.07
GPNMB-203ENST00000409458 MTERF4Q7Z6M4 381 aaKnown RBP14.58□□□□□ -0.07
GPNMB-203ENST00000409458 HERC6Q8IVU3 1022 aa14.58□□□□□ -0.07
GPNMB-203ENST00000409458 ARHGAP18Q8N392 663 aa14.58□□□□□ -0.07
GPNMB-203ENST00000409458 GLIS1Q8NBF1 620 aa14.58□□□□□ -0.07
GPNMB-203ENST00000409458 P3H4Q92791 437 aa14.58□□□□□ -0.07
GPNMB-203ENST00000409458 TKTL2Q9H0I9 626 aa14.58□□□□□ -0.07
GPNMB-203ENST00000409458 ZDHHC18Q9NUE0 388 aa14.58□□□□□ -0.07
GPNMB-203ENST00000409458 RCOR3Q9P2K3 495 aaPredicted RBP14.58□□□□□ -0.07
GPNMB-203ENST00000409458 MFHAS1Q9Y4C4 1052 aa14.58□□□□□ -0.07
GPNMB-203ENST00000409458 INSL6Q9Y581 213 aa14.58□□□□□ -0.07
GPNMB-203ENST00000409458 LCHNA4D1U4 455 aa14.58□□□□□ -0.08
GPNMB-203ENST00000409458 FAM72CH0Y354 149 aa14.58□□□□□ -0.08
GPNMB-203ENST00000409458 MCF2LO15068 1137 aa14.58□□□□□ -0.08
GPNMB-203ENST00000409458 ATP8B1O43520 1251 aa14.58□□□□□ -0.08
GPNMB-203ENST00000409458 CREB3O43889 395 aa14.58□□□□□ -0.08
GPNMB-203ENST00000409458 KRT14P02533 472 aa14.58□□□□□ -0.08
GPNMB-203ENST00000409458 GBP1P32455 592 aa14.58□□□□□ -0.08
GPNMB-203ENST00000409458 ARL4AP40617 200 aa14.58□□□□□ -0.08
GPNMB-203ENST00000409458 VPS41P49754 854 aa14.58□□□□□ -0.08
GPNMB-203ENST00000409458 LMNB2Q03252 620 aa14.58□□□□□ -0.08
GPNMB-203ENST00000409458 TAF10Q12962 218 aa14.58□□□□□ -0.08
GPNMB-203ENST00000409458 NNTQ13423 1086 aa14.58□□□□□ -0.08
GPNMB-203ENST00000409458 FAM72AQ5TYM5 149 aa14.58□□□□□ -0.08
GPNMB-203ENST00000409458 NCBP2-AS2Q69YL0 99 aa14.58□□□□□ -0.08
GPNMB-203ENST00000409458 FAM72DQ6L9T8 149 aa14.58□□□□□ -0.08
GPNMB-203ENST00000409458 MSANTD2Q6P1R3 559 aa14.58□□□□□ -0.08
GPNMB-203ENST00000409458 FAM72BQ86X60 149 aa14.58□□□□□ -0.08
GPNMB-203ENST00000409458 ZNF461Q8TAF7 563 aa14.58□□□□□ -0.08
GPNMB-203ENST00000409458 SP7Q8TDD2 431 aaPredicted RBP14.58□□□□□ -0.08
GPNMB-203ENST00000409458 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.58□□□□□ -0.08
GPNMB-203ENST00000409458 CLP1Q92989 425 aaKnown RBP14.58□□□□□ -0.08
GPNMB-203ENST00000409458 ZBP1Q9H171 429 aa14.58□□□□□ -0.08
GPNMB-203ENST00000409458 WDCPQ9H6R7 721 aa14.58□□□□□ -0.08
GPNMB-203ENST00000409458 ARHGEF4Q9NR80 690 aa14.58□□□□□ -0.08
GPNMB-203ENST00000409458 ETNK2Q9NVF9 386 aa14.58□□□□□ -0.08
GPNMB-203ENST00000409458 COMMD8Q9NX08 183 aa14.58□□□□□ -0.08
GPNMB-203ENST00000409458 SNX10Q9Y5X0 201 aa14.58□□□□□ -0.08
GPNMB-203ENST00000409458 H3BRJ5 948 aa14.57□□□□□ -0.08
GPNMB-203ENST00000409458 MAP3K6O95382 1288 aa14.57□□□□□ -0.08
GPNMB-203ENST00000409458 ZSCAN5DPP0CG00 497 aa14.57□□□□□ -0.08
GPNMB-203ENST00000409458 ETS1P14921 441 aa14.57□□□□□ -0.08
GPNMB-203ENST00000409458 ATF2P15336 505 aa14.57□□□□□ -0.08
GPNMB-203ENST00000409458 AMPD1P23109 780 aa14.57□□□□□ -0.08
GPNMB-203ENST00000409458 IVDP26440 423 aa14.57□□□□□ -0.08
GPNMB-203ENST00000409458 GDF10P55107 478 aa14.57□□□□□ -0.08
GPNMB-203ENST00000409458 SEMA3BQ13214 749 aa14.57□□□□□ -0.08
GPNMB-203ENST00000409458 DPYSQ14117 519 aa14.57□□□□□ -0.08
GPNMB-203ENST00000409458 ARL13BQ3SXY8 428 aa14.57□□□□□ -0.08
GPNMB-203ENST00000409458 RASIP1Q5U651 963 aa14.57□□□□□ -0.08
GPNMB-203ENST00000409458 TPGS2Q68CL5 300 aa14.57□□□□□ -0.08
GPNMB-203ENST00000409458 B4GALNT4Q76KP1 1039 aa14.57□□□□□ -0.08
GPNMB-203ENST00000409458 ZC3H18Q86VM9 953 aaKnown RBP14.57□□□□□ -0.08
GPNMB-203ENST00000409458 TSEN2Q8NCE0 465 aaKnown RBP14.57□□□□□ -0.08
GPNMB-203ENST00000409458 FBXO25Q8TCJ0 367 aa14.57□□□□□ -0.08
GPNMB-203ENST00000409458 TTLL2Q9BWV7 592 aa14.57□□□□□ -0.08
GPNMB-203ENST00000409458 MRPL17Q9NRX2 175 aaKnown RBP14.57□□□□□ -0.08
GPNMB-203ENST00000409458 ARHGEF38Q9NXL2 777 aa14.57□□□□□ -0.08
GPNMB-203ENST00000409458 YIPF1Q9Y548 306 aa14.57□□□□□ -0.08
GPNMB-203ENST00000409458 HEY1Q9Y5J3 304 aa14.57□□□□□ -0.08
GPNMB-203ENST00000409458 SLC4A7Q9Y6M7 1214 aa14.57□□□□□ -0.08
GPNMB-203ENST00000409458 SGK1O00141 431 aa14.56□□□□□ -0.08
GPNMB-203ENST00000409458 EEF2KO00418 725 aaKnown RBP14.56□□□□□ -0.08
GPNMB-203ENST00000409458 TP73O15350 636 aa14.56□□□□□ -0.08
GPNMB-203ENST00000409458 LILRB3O75022 631 aa14.56□□□□□ -0.08
GPNMB-203ENST00000409458 RBP3P10745 1247 aa14.56□□□□□ -0.08
GPNMB-203ENST00000409458 RARGP13631 454 aa14.56□□□□□ -0.08
GPNMB-203ENST00000409458 ATP2A2P16615 1042 aaKnown RBP14.56□□□□□ -0.08
GPNMB-203ENST00000409458 ZFXP17010 805 aaPredicted RBP14.56□□□□□ -0.08
GPNMB-203ENST00000409458 GGCXP38435 758 aa14.56□□□□□ -0.08
GPNMB-203ENST00000409458 TUFMP49411 452 aaKnown RBP14.56□□□□□ -0.08
GPNMB-203ENST00000409458 PLTPP55058 493 aa14.56□□□□□ -0.08
GPNMB-203ENST00000409458 GBE1Q04446 702 aa14.56□□□□□ -0.08
GPNMB-203ENST00000409458 RAB33AQ14088 237 aa14.56□□□□□ -0.08
GPNMB-203ENST00000409458 RFX8Q6ZV50 586 aa14.56□□□□□ -0.08
GPNMB-203ENST00000409458 CCDC89Q8N998 374 aa14.56□□□□□ -0.08
GPNMB-203ENST00000409458 KLHL23Q8NBE8 558 aa14.56□□□□□ -0.08
GPNMB-203ENST00000409458 ART4Q93070 314 aa14.56□□□□□ -0.08
GPNMB-203ENST00000409458 RNF34Q969K3 372 aa14.56□□□□□ -0.08
GPNMB-203ENST00000409458 SNF8Q96H20 258 aa14.56□□□□□ -0.08
GPNMB-203ENST00000409458 SERPINB11Q96P15 392 aa14.56□□□□□ -0.08
GPNMB-203ENST00000409458 FMO2Q99518 471 aa14.56□□□□□ -0.08
GPNMB-203ENST00000409458 RAD9AQ99638 391 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms