RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 MATKP42679 507 aa20.67■□□□□ 0.9
PDLIM2-207ENST00000409417 RPS9P46781 194 aaKnown RBP20.67■□□□□ 0.9
PDLIM2-207ENST00000409417 GALK1P51570 392 aa20.67■□□□□ 0.9
PDLIM2-207ENST00000409417 NUBP1P53384 320 aa20.67■□□□□ 0.9
PDLIM2-207ENST00000409417 GRSF1Q12849 480 aaKnown RBP eCLIP20.67■□□□□ 0.9
PDLIM2-207ENST00000409417 TRIM14Q14142 442 aa20.67■□□□□ 0.9
PDLIM2-207ENST00000409417 ARCQ7LC44 396 aa20.67■□□□□ 0.9
PDLIM2-207ENST00000409417 ZNF571Q7Z3V5 609 aaPredicted RBP20.67■□□□□ 0.9
PDLIM2-207ENST00000409417 SLC39A13Q96H72 371 aa20.67■□□□□ 0.9
PDLIM2-207ENST00000409417 ADAM22Q9P0K1 906 aa20.67■□□□□ 0.9
PDLIM2-207ENST00000409417 MARK1Q9P0L2 795 aa20.67■□□□□ 0.9
PDLIM2-207ENST00000409417 GOLGA8SH3BPF8 625 aa20.66■□□□□ 0.9
PDLIM2-207ENST00000409417 CALB1P05937 261 aa20.66■□□□□ 0.9
PDLIM2-207ENST00000409417 CHRNB1P11230 501 aa20.66■□□□□ 0.9
PDLIM2-207ENST00000409417 SKILP12757 684 aa20.66■□□□□ 0.9
PDLIM2-207ENST00000409417 EIF2DP41214 584 aaKnown RBP20.66■□□□□ 0.9
PDLIM2-207ENST00000409417 MAGEA9P43362 315 aa20.66■□□□□ 0.9
PDLIM2-207ENST00000409417 RNASE9P60153 205 aaKnown RBP20.66■□□□□ 0.9
PDLIM2-207ENST00000409417 C1QBPQ07021 282 aaKnown RBP20.66■□□□□ 0.9
PDLIM2-207ENST00000409417 PTP4A2Q12974 167 aa20.66■□□□□ 0.9
PDLIM2-207ENST00000409417 EIF4EBP2Q13542 120 aaPredicted RBP20.66■□□□□ 0.9
PDLIM2-207ENST00000409417 CCINQ13939 588 aa20.66■□□□□ 0.9
PDLIM2-207ENST00000409417 ANO4Q32M45 955 aa20.66■□□□□ 0.9
PDLIM2-207ENST00000409417 HGSNATQ68CP4 663 aa20.66■□□□□ 0.9
PDLIM2-207ENST00000409417 NAIF1Q69YI7 327 aaPredicted RBP20.66■□□□□ 0.9
PDLIM2-207ENST00000409417 PPP1R2P3Q6NXS1 205 aa20.66■□□□□ 0.9
PDLIM2-207ENST00000409417 TPGS1Q6ZTW0 290 aa20.66■□□□□ 0.9
PDLIM2-207ENST00000409417 FAM217AQ8IXS0 508 aa20.66■□□□□ 0.9
PDLIM2-207ENST00000409417 CPXM2Q8N436 756 aa20.66■□□□□ 0.9
PDLIM2-207ENST00000409417 CD101Q93033 1021 aa20.66■□□□□ 0.9
PDLIM2-207ENST00000409417 AZIN2Q96A70 460 aa20.66■□□□□ 0.9
PDLIM2-207ENST00000409417 FCRL2Q96LA5 508 aaPredicted RBP20.66■□□□□ 0.9
PDLIM2-207ENST00000409417 TRIM5Q9C035 493 aa20.66■□□□□ 0.9
PDLIM2-207ENST00000409417 LMAN1LQ9HAT1 526 aa20.66■□□□□ 0.9
PDLIM2-207ENST00000409417 FBRSL1Q9HCM7 1045 aaKnown RBP20.66■□□□□ 0.9
PDLIM2-207ENST00000409417 RRN3Q9NYV6 651 aa20.66■□□□□ 0.9
PDLIM2-207ENST00000409417 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.66■□□□□ 0.9
PDLIM2-207ENST00000409417 WDR35Q9P2L0 1181 aa20.66■□□□□ 0.9
PDLIM2-207ENST00000409417 TMEM59LQ9UK28 342 aa20.66■□□□□ 0.9
PDLIM2-207ENST00000409417 MUC6Q6W4X9 2439 aa20.66■□□□□ 0.9
PDLIM2-207ENST00000409417 CACNA1HO95180 2353 aa20.65■□□□□ 0.9
PDLIM2-207ENST00000409417 IRAK2O43187 625 aa20.65■□□□□ 0.9
PDLIM2-207ENST00000409417 DRD1P21728 446 aa20.65■□□□□ 0.9
PDLIM2-207ENST00000409417 GBP1P32455 592 aa20.65■□□□□ 0.9
PDLIM2-207ENST00000409417 OPRD1P41143 372 aa20.65■□□□□ 0.9
PDLIM2-207ENST00000409417 SLC11A2P49281 568 aa20.65■□□□□ 0.9
PDLIM2-207ENST00000409417 PITX1P78337 314 aaPredicted RBP20.65■□□□□ 0.9
PDLIM2-207ENST00000409417 LRRC32Q14392 662 aa20.65■□□□□ 0.9
PDLIM2-207ENST00000409417 DGKKQ5KSL6 1271 aa20.65■□□□□ 0.9
PDLIM2-207ENST00000409417 ADGRF1Q5T601 910 aa20.65■□□□□ 0.9
PDLIM2-207ENST00000409417 ACAD10Q6JQN1 1059 aa20.65■□□□□ 0.9
PDLIM2-207ENST00000409417 MON1BQ7L1V2 547 aa20.65■□□□□ 0.9
PDLIM2-207ENST00000409417 NT5C3BQ969T7 300 aa20.65■□□□□ 0.9
PDLIM2-207ENST00000409417 BBS2Q9BXC9 721 aa20.65■□□□□ 0.9
PDLIM2-207ENST00000409417 FAM204AQ9H8W3 233 aa20.65■□□□□ 0.9
PDLIM2-207ENST00000409417 DDIT4Q9NX09 232 aa20.65■□□□□ 0.9
PDLIM2-207ENST00000409417 AP5Z1O43299 807 aa20.64■□□□□ 0.89
PDLIM2-207ENST00000409417 GSCP56915 257 aaPredicted RBP20.64■□□□□ 0.89
PDLIM2-207ENST00000409417 FSTL4Q6MZW2 842 aa20.64■□□□□ 0.89
PDLIM2-207ENST00000409417 ETFBKMTQ8IXQ9 262 aa20.64■□□□□ 0.89
PDLIM2-207ENST00000409417 SYNPOQ8N3V7 929 aa20.64■□□□□ 0.89
PDLIM2-207ENST00000409417 DTWD2Q8NBA8 298 aa20.64■□□□□ 0.89
PDLIM2-207ENST00000409417 STAP1Q9ULZ2 295 aa20.64■□□□□ 0.89
PDLIM2-207ENST00000409417 MYOFQ9NZM1 2061 aa20.64■□□□□ 0.89
PDLIM2-207ENST00000409417 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.63■□□□□ 0.89
PDLIM2-207ENST00000409417 NEDD8-MDP1E9PL57 170 aa20.63■□□□□ 0.89
PDLIM2-207ENST00000409417 SERPING1P05155 500 aa20.63■□□□□ 0.89
PDLIM2-207ENST00000409417 SLC2A3P11169 496 aa20.63■□□□□ 0.89
PDLIM2-207ENST00000409417 GZMAP12544 262 aa20.63■□□□□ 0.89
PDLIM2-207ENST00000409417 TYRP14679 529 aa20.63■□□□□ 0.89
PDLIM2-207ENST00000409417 HNRNPH3P31942 346 aaKnown RBP20.63■□□□□ 0.89
PDLIM2-207ENST00000409417 FLT3P36888 993 aa20.63■□□□□ 0.89
PDLIM2-207ENST00000409417 ZC3H12AQ5D1E8 599 aaKnown RBP20.63■□□□□ 0.89
PDLIM2-207ENST00000409417 C12orf40Q86WS4 652 aa20.63■□□□□ 0.89
PDLIM2-207ENST00000409417 VCPIP1Q96JH7 1222 aa20.63■□□□□ 0.89
PDLIM2-207ENST00000409417 NPY6RQ99463 290 aa20.63■□□□□ 0.89
PDLIM2-207ENST00000409417 CHRDQ9H2X0 955 aa20.63■□□□□ 0.89
PDLIM2-207ENST00000409417 RBM12Q9NTZ6 932 aaKnown RBP20.63■□□□□ 0.89
PDLIM2-207ENST00000409417 TMEM51Q9NW97 253 aa20.63■□□□□ 0.89
PDLIM2-207ENST00000409417 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.63■□□□□ 0.89
PDLIM2-207ENST00000409417 TAS2R14Q9NYV8 317 aa20.63■□□□□ 0.89
PDLIM2-207ENST00000409417 WDFY4Q6ZS81 3184 aa20.63■□□□□ 0.89
PDLIM2-207ENST00000409417 GFRA2O00451 464 aa20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 DDX3XO00571 662 aaKnown RBP eCLIP20.62■□□□□ 0.899e-11■■■■■ 33.8
PDLIM2-207ENST00000409417 CACNG3O60359 315 aa20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 ACSL4O60488 711 aa20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 PENKP01210 267 aaPredicted RBP20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 APOEP02649 317 aa20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 TPM1P09493 284 aa20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 SLC6A11P48066 632 aa20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 SLC25A52Q3SY17 297 aa20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 TDRD12Q587J7 1177 aaKnown RBP20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 PHLDB2Q86SQ0 1253 aa20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 VPS36Q86VN1 386 aa20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 DRC7Q8IY82 874 aa20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 MCOLN2Q8IZK6 566 aa20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 NAT16Q8N8M0 369 aa20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 C3orf20Q8ND61 904 aa20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 OR8K1Q8NGG5 319 aa20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 PNKPQ96T60 521 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms