RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 NMUR1Q9HB89 426 aa13.43□□□□□ -0.26
SNORD88B-201ENST00000408454 RWDD2AQ9UIY3 292 aa13.43□□□□□ -0.26
SNORD88B-201ENST00000408454 MAN1B1Q9UKM7 699 aa13.43□□□□□ -0.26
SNORD88B-201ENST00000408454 ANGPTL2Q9UKU9 493 aa13.43□□□□□ -0.26
SNORD88B-201ENST00000408454 SCML1Q9UN30 329 aa13.43□□□□□ -0.26
SNORD88B-201ENST00000408454 SLC6A14Q9UN76 642 aa13.43□□□□□ -0.26
SNORD88B-201ENST00000408454 DCDC2BA2VCK2 349 aa13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 GTPBP10A4D1E9 387 aaKnown RBP13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 SCAMP3O14828 347 aaKnown RBP13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 RNASEH1O60930 286 aaKnown RBP13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 APOEP02649 317 aa13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 ASLP04424 464 aa13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 CEACAM1P13688 526 aa13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 CSRP1P21291 193 aaKnown RBP13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 BPIFB4P59827 614 aa13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 KCNH2Q12809 1159 aa13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 MORC3Q14149 939 aa13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 SF3A2Q15428 464 aaKnown RBP13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 TTC31Q49AM3 519 aaPredicted RBP13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 TRIM61Q5EBN2 209 aa13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 CT47A1Q5JQC4 288 aaPredicted RBP13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 TTI2Q6NXR4 508 aa13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 MSANTD2Q6P1R3 559 aa13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 SERPINA13PQ6UXR4 307 aa13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 SCD5Q86SK9 330 aa13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 C12orf40Q86WS4 652 aa13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 FMNL3Q8IVF7 1028 aa13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 RBBP8NLQ8NC74 664 aaPredicted RBP13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 EHBP1Q8NDI1 1231 aa13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 CADM4Q8NFZ8 388 aa13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 TATDN2Q93075 761 aa13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 SKA1Q96BD8 255 aa13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 LSM14BQ9BX40 385 aaKnown RBP13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 CIPCQ9C0C6 399 aa13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 PRDM16Q9HAZ2 1276 aa13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 C2orf42Q9NWW7 574 aa13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 CHMP5Q9NZZ3 219 aa13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 SUN2Q9UH99 717 aa13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 FBXO10Q9UK96 956 aa13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 CTNND2Q9UQB3 1225 aa13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 MYO16Q9Y6X6 1858 aa13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 USP34Q70CQ2 3546 aa13.42□□□□□ -0.26
SNORD88B-201ENST00000408454 MYH10P35580 1976 aa13.41□□□□□ -0.26
SNORD88B-201ENST00000408454 LTFP02788 710 aa13.41□□□□□ -0.26
SNORD88B-201ENST00000408454 KRT5P13647 590 aa13.41□□□□□ -0.26
SNORD88B-201ENST00000408454 NNMTP40261 264 aa13.41□□□□□ -0.26
SNORD88B-201ENST00000408454 DAOAP59103 153 aa13.41□□□□□ -0.26
SNORD88B-201ENST00000408454 LRMPQ12912 555 aa13.41□□□□□ -0.26
SNORD88B-201ENST00000408454 TTC39BQ5VTQ0 682 aaPredicted RBP13.41□□□□□ -0.26
SNORD88B-201ENST00000408454 NAIF1Q69YI7 327 aaPredicted RBP13.41□□□□□ -0.26
SNORD88B-201ENST00000408454 SLC23A3Q6PIS1 610 aa13.41□□□□□ -0.26
SNORD88B-201ENST00000408454 IL27RAQ6UWB1 636 aa13.41□□□□□ -0.26
SNORD88B-201ENST00000408454 TMEM92Q6UXU6 159 aa13.41□□□□□ -0.26
SNORD88B-201ENST00000408454 GBP6Q6ZN66 633 aa13.41□□□□□ -0.26
SNORD88B-201ENST00000408454 TRIM59Q8IWR1 403 aa13.41□□□□□ -0.26
SNORD88B-201ENST00000408454 FAM217AQ8IXS0 508 aa13.41□□□□□ -0.26
SNORD88B-201ENST00000408454 RGL4Q8IZJ4 473 aa13.41□□□□□ -0.26
SNORD88B-201ENST00000408454 HJURPQ8NCD3 748 aaPredicted RBP13.41□□□□□ -0.26
SNORD88B-201ENST00000408454 CHAMP1Q96JM3 812 aa13.41□□□□□ -0.26
SNORD88B-201ENST00000408454 ARID3AQ99856 593 aa13.41□□□□□ -0.26
SNORD88B-201ENST00000408454 ELOVL2Q9NXB9 296 aa13.41□□□□□ -0.26
SNORD88B-201ENST00000408454 CALCOCO1Q9P1Z2 691 aa13.41□□□□□ -0.26
SNORD88B-201ENST00000408454 STOML2Q9UJZ1 356 aa13.41□□□□□ -0.26
SNORD88B-201ENST00000408454 AGO1Q9UL18 857 aaKnown RBP13.41□□□□□ -0.26
SNORD88B-201ENST00000408454 STON1Q9Y6Q2 735 aa13.41□□□□□ -0.26
SNORD88B-201ENST00000408454 ZNF292O60281 2723 aa13.41□□□□□ -0.26
SNORD88B-201ENST00000408454 MED19A0JLT2 244 aaPredicted RBP13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 TRIM49BA6NDI0 452 aa13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 MEI4A8MW99 385 aa13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 H0Y626 953 aa13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 ADAM23O75077 832 aa13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 TRIM16O95361 564 aa13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 CFIP05156 583 aa13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 GLI1P08151 1106 aa13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 HMBSP08397 361 aa13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 SERPINF2P08697 491 aa13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 LCP1P13796 627 aa13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 GABRG2P18507 467 aa13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 POLR2EP19388 210 aaKnown RBP13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 CD6P30203 668 aa13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 ANP32AP39687 249 aaKnown RBP13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 TBX4P57082 545 aa13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 PTK2Q05397 1052 aa13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 ZNF33AQ06730 810 aa13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 SLC14A1Q13336 389 aa13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 MAP7D1Q3KQU3 841 aa13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 FYB2Q5VWT5 728 aa13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 PEAR1Q5VY43 1037 aaPredicted RBP13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 RNF219Q5W0B1 726 aaPredicted RBP13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 EGFLAMQ63HQ2 1017 aa13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 KIAA1324Q6UXG2 1013 aaKnown RBP13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 TOGARAM2Q6ZUX3 1019 aa13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 KDM1BQ8NB78 822 aa13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 SLC35F5Q8WV83 523 aa13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 FAM149B1Q96BN6 582 aa13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 SIPA1Q96FS4 1042 aa13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 NUP58Q9BVL2 599 aa13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 SRRTQ9BXP5 876 aaKnown RBP13.4□□□□□ -0.26
SNORD88B-201ENST00000408454 ST7Q9NRC1 585 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms