RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 ZNF551Q7Z340 670 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 RAB11FIP4Q86YS3 637 aa4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 TEX19Q8NA77 164 aa4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 ACTRT2Q8TDY3 377 aa4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 CAVIN3Q969G5 261 aa4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 RSPRY1Q96DX4 576 aa4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 RBM17Q96I25 401 aaKnown RBP4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 TWNKQ96RR1 684 aa4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 ELOVL1Q9BW60 279 aa4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 TLR8Q9NR97 1041 aaKnown RBP4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 IL17RBQ9NRM6 502 aa4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 LIN7CQ9NUP9 197 aaKnown RBP4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 SYBUQ9NX95 663 aa4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 NDUFAF4Q9P032 175 aa4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 RAPGEFL1Q9UHV5 662 aa4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 GJD2Q9UKL4 321 aa4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 AMFRQ9UKV5 643 aa4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 SLC12A4Q9UP95 1085 aa4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 DNAJC16Q9Y2G8 782 aa4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 DERAQ9Y315 318 aa4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 EPN1Q9Y6I3 576 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P17-201ENST00000403495 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 GXYLT2A0PJZ3 443 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 A6NLC8 198 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 J3KRW8 73 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 KLK10O43240 276 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 EPB41L2O43491 1005 aaKnown RBP4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 NARSO43776 548 aaKnown RBP4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 KAT7O95251 611 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 TTLL1O95922 423 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 ONECUT2O95948 504 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 PEX11BO96011 259 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 CSF1P09603 554 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 TMIGD3P0DMS9 266 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 LYL1P12980 280 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 ZNF37AP17032 561 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 NDUFB7P17568 137 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 IGHMBP2P38935 993 aaKnown RBP4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 GRIA3P42263 894 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 DGKQP52824 942 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 CYP4F2P78329 520 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 GPC5P78333 572 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 GAB1Q13480 694 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 DNASE1L3Q13609 305 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 SIM2Q14190 667 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 AWAT1Q58HT5 328 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 PCID2Q5JVF3 399 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 DGAT2L7PQ6IED9 249 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 ZNF627Q7L945 461 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 MAATS1Q7Z4T9 603 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 RASAL3Q86YV0 1011 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 HTRA1Q92743 480 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 STAMQ92783 540 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 RRP36Q96EU6 259 aaKnown RBP4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 TRMT61AQ96FX7 289 aaKnown RBP4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 MMS19Q96T76 1030 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 PAAF1Q9BRP4 392 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 CYP4F11Q9HBI6 524 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 TRIM36Q9NQ86 728 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 SMC4Q9NTJ3 1288 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 SERTAD4Q9NUC0 356 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 LRIT1Q9P2V4 623 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 PGAP2Q9UHJ9 254 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 ANAPC4Q9UJX5 808 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 ADAMTS5Q9UNA0 930 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 MAST3O60307 1309 aa4.39□□□□□ -1.71
HMGB1P17-201ENST00000403495 TBC1D3DA0A087WVF3 549 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 TBC1D3IA0A087WXS9 549 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 TBC1D3EA0A087X179 549 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 TBC1D3KA0A087X1G2 549 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 GRID2IPA4D2P6 1211 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 TBC1D3BA6NDS4 549 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 TBC1D3FA6NER0 549 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 TBC1D3LB9A6J9 549 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 PRRT4C9JH25 899 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 QSOX1O00391 747 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 EXOC3O60645 756 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 LARGE1O95461 756 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 CD4P01730 458 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 HNRNPA1P09651 372 aaKnown RBP eCLIP4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 TBC1D3HP0C7X1 549 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 HKR1P10072 659 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 GRK5P34947 590 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 CCT8P50990 548 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 RCAN1P53805 252 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 GEMIN4P57678 1058 aaKnown RBP4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 EEFSECP57772 596 aaKnown RBP4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 FOXL2P58012 376 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 TAS2R50P59544 299 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 TXNL4AP83876 142 aaKnown RBP4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 UBE3AQ05086 875 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 CCDC15Q0P6D6 951 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 MPP3Q13368 585 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 FAM187BQ17R55 369 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 PLAC9Q5JTB6 97 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 TBC1D3GQ6DHY5 549 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 TBC1D3CQ6IPX1 549 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 ACSM6Q6P461 480 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 USP51Q70EK9 711 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms