RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 SLC39A13Q96H72 371 aa20.01■□□□□ 0.79
RTN4-207ENST00000402434 PNKPQ96T60 521 aa20.01■□□□□ 0.79
RTN4-207ENST00000402434 BBS2Q9BXC9 721 aa20.01■□□□□ 0.79
RTN4-207ENST00000402434 FBXO4Q9UKT5 387 aa20.01■□□□□ 0.79
RTN4-207ENST00000402434 ATG2BQ96BY7 2078 aa20■□□□□ 0.79
RTN4-207ENST00000402434 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20■□□□□ 0.79
RTN4-207ENST00000402434 GFRA2O00451 464 aa20■□□□□ 0.79
RTN4-207ENST00000402434 LAMTOR5O43504 91 aa20■□□□□ 0.79
RTN4-207ENST00000402434 CACNG3O60359 315 aa20■□□□□ 0.79
RTN4-207ENST00000402434 TULP3O75386 442 aa20■□□□□ 0.79
RTN4-207ENST00000402434 UNGP13051 313 aaPredicted RBP20■□□□□ 0.79
RTN4-207ENST00000402434 TYRP14679 529 aa20■□□□□ 0.79
RTN4-207ENST00000402434 FERP16591 822 aa20■□□□□ 0.79
RTN4-207ENST00000402434 MMP8P22894 467 aa20■□□□□ 0.79
RTN4-207ENST00000402434 TBX4P57082 545 aa20■□□□□ 0.79
RTN4-207ENST00000402434 ZNF445P59923 1031 aa20■□□□□ 0.79
RTN4-207ENST00000402434 MESP2Q0VG99 397 aa20■□□□□ 0.79
RTN4-207ENST00000402434 DCAF6Q58WW2 860 aa20■□□□□ 0.79
RTN4-207ENST00000402434 NAA35Q5VZE5 725 aa20■□□□□ 0.79
RTN4-207ENST00000402434 MSANTD4Q8NCY6 345 aa20■□□□□ 0.79
RTN4-207ENST00000402434 AZIN2Q96A70 460 aa20■□□□□ 0.79
RTN4-207ENST00000402434 FCRL2Q96LA5 508 aaPredicted RBP20■□□□□ 0.79
RTN4-207ENST00000402434 PCDHB18PQ96TA0 734 aa20■□□□□ 0.79
RTN4-207ENST00000402434 PRMT8Q9NR22 394 aaPredicted RBP20■□□□□ 0.79
RTN4-207ENST00000402434 NEDD8-MDP1E9PL57 170 aa19.99■□□□□ 0.79
RTN4-207ENST00000402434 K7EQS6 105 aa19.99■□□□□ 0.79
RTN4-207ENST00000402434 TRUB2O95900 331 aaKnown RBP19.99■□□□□ 0.79
RTN4-207ENST00000402434 PENKP01210 267 aaPredicted RBP19.99■□□□□ 0.79
RTN4-207ENST00000402434 GRIA2P42262 883 aa19.99■□□□□ 0.79
RTN4-207ENST00000402434 ADGRF1Q5T601 910 aa19.99■□□□□ 0.79
RTN4-207ENST00000402434 TAC4Q86UU9 113 aa19.99■□□□□ 0.79
RTN4-207ENST00000402434 XYLT1Q86Y38 959 aa19.99■□□□□ 0.79
RTN4-207ENST00000402434 DEFB106AQ8N104 65 aa19.99■□□□□ 0.79
RTN4-207ENST00000402434 NAT16Q8N8M0 369 aa19.99■□□□□ 0.79
RTN4-207ENST00000402434 CCDC26Q8TAB7 109 aa19.99■□□□□ 0.79
RTN4-207ENST00000402434 ADAM32Q8TC27 787 aa19.99■□□□□ 0.79
RTN4-207ENST00000402434 SYT11Q9BT88 431 aa19.99■□□□□ 0.79
RTN4-207ENST00000402434 NUP58Q9BVL2 599 aa19.99■□□□□ 0.79
RTN4-207ENST00000402434 AIPL1Q9NZN9 384 aa19.99■□□□□ 0.79
RTN4-207ENST00000402434 IFNKQ9P0W0 207 aa19.99■□□□□ 0.79
RTN4-207ENST00000402434 DEC1Q9P2X7 70 aa19.99■□□□□ 0.79
RTN4-207ENST00000402434 FBXO10Q9UK96 956 aa19.99■□□□□ 0.79
RTN4-207ENST00000402434 LRRC53A6NM62 1247 aa19.99■□□□□ 0.79
RTN4-207ENST00000402434 CHURC1-FNTBB4DL54 471 aa19.99■□□□□ 0.79
RTN4-207ENST00000402434 IRAK2O43187 625 aa19.99■□□□□ 0.79
RTN4-207ENST00000402434 GRAP2O75791 330 aa19.99■□□□□ 0.79
RTN4-207ENST00000402434 KAT7O95251 611 aa19.99■□□□□ 0.79
RTN4-207ENST00000402434 CCR3P51677 355 aa19.99■□□□□ 0.79
RTN4-207ENST00000402434 PITX1P78337 314 aaPredicted RBP19.99■□□□□ 0.79
RTN4-207ENST00000402434 CDK17Q00537 523 aa19.99■□□□□ 0.79
RTN4-207ENST00000402434 NHLH1Q02575 133 aa19.99■□□□□ 0.79
RTN4-207ENST00000402434 ZNF528Q3MIS6 628 aa19.99■□□□□ 0.79
RTN4-207ENST00000402434 PREPLQ4J6C6 727 aaPredicted RBP19.99■□□□□ 0.79
RTN4-207ENST00000402434 FYB2Q5VWT5 728 aa19.99■□□□□ 0.79
RTN4-207ENST00000402434 XPO6Q96QU8 1125 aaKnown RBP19.99■□□□□ 0.79
RTN4-207ENST00000402434 AGPAT1Q99943 283 aa19.99■□□□□ 0.79
RTN4-207ENST00000402434 RNF40O75150 1001 aa19.98■□□□□ 0.79
RTN4-207ENST00000402434 DAB1O75553 588 aa19.98■□□□□ 0.79
RTN4-207ENST00000402434 PAPSS2O95340 614 aaPredicted RBP19.98■□□□□ 0.79
RTN4-207ENST00000402434 NOS2P35228 1153 aa19.98■□□□□ 0.79
RTN4-207ENST00000402434 MATKP42679 507 aa19.98■□□□□ 0.79
RTN4-207ENST00000402434 CXCL12P48061 93 aa19.98■□□□□ 0.79
RTN4-207ENST00000402434 CENPCQ03188 943 aa19.98■□□□□ 0.79
RTN4-207ENST00000402434 CLEC16AQ2KHT3 1053 aa19.98■□□□□ 0.79
RTN4-207ENST00000402434 C2CD6Q53TS8 623 aa19.98■□□□□ 0.79
RTN4-207ENST00000402434 PKN3Q6P5Z2 889 aa19.98■□□□□ 0.79
RTN4-207ENST00000402434 SLC30A5Q8TAD4 765 aa19.98■□□□□ 0.79
RTN4-207ENST00000402434 NT5C3BQ969T7 300 aa19.98■□□□□ 0.79
RTN4-207ENST00000402434 IRX2Q9BZI1 471 aaPredicted RBP19.98■□□□□ 0.79
RTN4-207ENST00000402434 ARHGEF4Q9NR80 690 aa19.98■□□□□ 0.79
RTN4-207ENST00000402434 A0A1W2PQJ5 194 aa19.97■□□□□ 0.79
RTN4-207ENST00000402434 ACSL4O60488 711 aa19.97■□□□□ 0.79
RTN4-207ENST00000402434 ATG13O75143 517 aa19.97■□□□□ 0.79
RTN4-207ENST00000402434 APODP05090 189 aa19.97■□□□□ 0.79
RTN4-207ENST00000402434 CISD3P0C7P0 127 aa19.97■□□□□ 0.79
RTN4-207ENST00000402434 SP9P0CG40 484 aa19.97■□□□□ 0.79
RTN4-207ENST00000402434 CHRM1P11229 460 aaPredicted RBP19.97■□□□□ 0.79
RTN4-207ENST00000402434 TNFRSF4P43489 277 aa19.97■□□□□ 0.79
RTN4-207ENST00000402434 SLC11A2P49281 568 aa19.97■□□□□ 0.79
RTN4-207ENST00000402434 PTP4A2Q12974 167 aa19.97■□□□□ 0.79
RTN4-207ENST00000402434 MMS22LQ6ZRQ5 1243 aa19.97■□□□□ 0.79
RTN4-207ENST00000402434 ARCQ7LC44 396 aa19.97■□□□□ 0.79
RTN4-207ENST00000402434 PHF13Q86YI8 300 aaPredicted RBP19.97■□□□□ 0.79
RTN4-207ENST00000402434 SFTPA1Q8IWL2 248 aa19.97■□□□□ 0.79
RTN4-207ENST00000402434 OLIG1Q8TAK6 271 aa19.97■□□□□ 0.79
RTN4-207ENST00000402434 NELL1Q92832 810 aa19.97■□□□□ 0.79
RTN4-207ENST00000402434 IQCDQ96DY2 449 aa19.97■□□□□ 0.79
RTN4-207ENST00000402434 DNAJC17Q9NVM6 304 aaKnown RBP19.97■□□□□ 0.79
RTN4-207ENST00000402434 C2orf42Q9NWW7 574 aa19.97■□□□□ 0.79
RTN4-207ENST00000402434 RRN3Q9NYV6 651 aa19.97■□□□□ 0.79
RTN4-207ENST00000402434 PLK2Q9NYY3 685 aa19.97■□□□□ 0.79
RTN4-207ENST00000402434 TMEM59LQ9UK28 342 aa19.97■□□□□ 0.79
RTN4-207ENST00000402434 KIAA1549LQ6ZVL6 1849 aa19.97■□□□□ 0.79
RTN4-207ENST00000402434 CYBBP04839 570 aa19.96■□□□□ 0.79
RTN4-207ENST00000402434 TDGF1P13385 188 aa19.96■□□□□ 0.79
RTN4-207ENST00000402434 GBP1P32455 592 aa19.96■□□□□ 0.79
RTN4-207ENST00000402434 PRKCIP41743 596 aa19.96■□□□□ 0.79
RTN4-207ENST00000402434 SATB1Q01826 763 aa19.96■□□□□ 0.79
RTN4-207ENST00000402434 PPP2R5DQ14738 602 aa19.96■□□□□ 0.79
RTN4-207ENST00000402434 MPPE1Q53F39 396 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms