RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 CHKAP35790 457 aa15.29■□□□□ 0.04
VAMP1-203ENST00000400911 CSNK1EP49674 416 aaKnown RBP15.29■□□□□ 0.04
VAMP1-203ENST00000400911 DBX2Q6ZNG2 339 aa15.29■□□□□ 0.04
VAMP1-203ENST00000400911 CCDC186Q7Z3E2 898 aa15.29■□□□□ 0.04
VAMP1-203ENST00000400911 TADA2BQ86TJ2 420 aa15.29■□□□□ 0.04
VAMP1-203ENST00000400911 GRAMD1CQ8IYS0 662 aa15.29■□□□□ 0.04
VAMP1-203ENST00000400911 BAHD1Q8TBE0 780 aaPredicted RBP15.29■□□□□ 0.04
VAMP1-203ENST00000400911 CDC6Q99741 560 aa15.29■□□□□ 0.04
VAMP1-203ENST00000400911 NT5C1AQ9BXI3 368 aa15.29■□□□□ 0.04
VAMP1-203ENST00000400911 CIPCQ9C0C6 399 aa15.29■□□□□ 0.04
VAMP1-203ENST00000400911 MAGEF1Q9HAY2 307 aa15.29■□□□□ 0.04
VAMP1-203ENST00000400911 PNPLA8Q9NP80 782 aa15.29■□□□□ 0.04
VAMP1-203ENST00000400911 RASAL2Q9UJF2 1139 aa15.29■□□□□ 0.04
VAMP1-203ENST00000400911 AGO1Q9UL18 857 aaKnown RBP15.29■□□□□ 0.04
VAMP1-203ENST00000400911 SLCO1B1Q9Y6L6 691 aa15.29■□□□□ 0.04
VAMP1-203ENST00000400911 MYOFQ9NZM1 2061 aa15.29■□□□□ 0.04
VAMP1-203ENST00000400911 PLXND1Q9Y4D7 1925 aa15.28■□□□□ 0.04
VAMP1-203ENST00000400911 IGLV3-19P01714 112 aa15.28■□□□□ 0.04
VAMP1-203ENST00000400911 HLA-DRAP01903 254 aa15.28■□□□□ 0.04
VAMP1-203ENST00000400911 EPHX1P07099 455 aa15.28■□□□□ 0.04
VAMP1-203ENST00000400911 RALAP11233 206 aa15.28■□□□□ 0.04
VAMP1-203ENST00000400911 TRIM21P19474 475 aaKnown RBP15.28■□□□□ 0.04
VAMP1-203ENST00000400911 PIK3CAP42336 1068 aa15.28■□□□□ 0.04
VAMP1-203ENST00000400911 PSEN1P49768 467 aa15.28■□□□□ 0.04
VAMP1-203ENST00000400911 COG7P83436 770 aa15.28■□□□□ 0.04
VAMP1-203ENST00000400911 INCA1Q0VD86 236 aa15.28■□□□□ 0.04
VAMP1-203ENST00000400911 EFEMP1Q12805 493 aa15.28■□□□□ 0.04
VAMP1-203ENST00000400911 STK4Q13043 487 aa15.28■□□□□ 0.04
VAMP1-203ENST00000400911 KIF19Q2TAC6 998 aa15.28■□□□□ 0.04
VAMP1-203ENST00000400911 ANKS1BQ7Z6G8 1248 aa15.28■□□□□ 0.04
VAMP1-203ENST00000400911 DENND1CQ8IV53 801 aa15.28■□□□□ 0.04
VAMP1-203ENST00000400911 SLC9A9Q8IVB4 645 aa15.28■□□□□ 0.04
VAMP1-203ENST00000400911 ZNF276Q8N554 614 aa15.28■□□□□ 0.04
VAMP1-203ENST00000400911 SNX19Q92543 992 aa15.28■□□□□ 0.04
VAMP1-203ENST00000400911 ZNF396Q96N95 335 aaPredicted RBP15.28■□□□□ 0.04
VAMP1-203ENST00000400911 BBC3Q96PG8 261 aaPredicted RBP15.28■□□□□ 0.04
VAMP1-203ENST00000400911 DUSP16Q9BY84 665 aa15.28■□□□□ 0.04
VAMP1-203ENST00000400911 APOBEC3GQ9HC16 384 aaKnown RBP15.28■□□□□ 0.04
VAMP1-203ENST00000400911 CLIC5Q9NZA1 410 aa15.28■□□□□ 0.04
VAMP1-203ENST00000400911 BTBD3Q9Y2F9 522 aa15.28■□□□□ 0.04
VAMP1-203ENST00000400911 PCDHGB2Q9Y5G2 931 aa15.28■□□□□ 0.04
VAMP1-203ENST00000400911 USP3Q9Y6I4 520 aa15.28■□□□□ 0.04
VAMP1-203ENST00000400911 ADAMTS9Q9P2N4 1935 aa15.27■□□□□ 0.04
VAMP1-203ENST00000400911 TRABD2BA6NFA1 517 aa15.27■□□□□ 0.04
VAMP1-203ENST00000400911 IKBKBO14920 756 aa15.27■□□□□ 0.04
VAMP1-203ENST00000400911 FLRT2O43155 660 aa15.27■□□□□ 0.04
VAMP1-203ENST00000400911 DKK1O94907 266 aa15.27■□□□□ 0.04
VAMP1-203ENST00000400911 CYBBP04839 570 aa15.27■□□□□ 0.04
VAMP1-203ENST00000400911 CD58P19256 250 aa15.27■□□□□ 0.04
VAMP1-203ENST00000400911 AFF3P51826 1226 aaKnown RBP15.27■□□□□ 0.04
VAMP1-203ENST00000400911 CYP4F3Q08477 520 aa15.27■□□□□ 0.04
VAMP1-203ENST00000400911 SUZ12Q15022 739 aaKnown RBP15.27■□□□□ 0.04
VAMP1-203ENST00000400911 C1orf220Q5T0J3 134 aa15.27■□□□□ 0.04
VAMP1-203ENST00000400911 TMEM215Q68D42 235 aa15.27■□□□□ 0.04
VAMP1-203ENST00000400911 SERPINA13PQ6UXR4 307 aa15.27■□□□□ 0.04
VAMP1-203ENST00000400911 RBBP8NLQ8NC74 664 aaPredicted RBP15.27■□□□□ 0.04
VAMP1-203ENST00000400911 KIAA0895Q8NCT3 520 aa15.27■□□□□ 0.04
VAMP1-203ENST00000400911 TMC2Q8TDI7 906 aa15.27■□□□□ 0.04
VAMP1-203ENST00000400911 DDI1Q8WTU0 396 aa15.27■□□□□ 0.04
VAMP1-203ENST00000400911 TMEM174Q8WUU8 243 aa15.27■□□□□ 0.04
VAMP1-203ENST00000400911 INTS4Q96HW7 963 aaKnown RBP15.27■□□□□ 0.04
VAMP1-203ENST00000400911 CDK5RAP1Q96SZ6 601 aaKnown RBP15.27■□□□□ 0.04
VAMP1-203ENST00000400911 DCLK3Q9C098 648 aa15.27■□□□□ 0.04
VAMP1-203ENST00000400911 C6orf106Q9H6K1 298 aaPredicted RBP15.27■□□□□ 0.04
VAMP1-203ENST00000400911 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.27■□□□□ 0.04
VAMP1-203ENST00000400911 SNX11Q9Y5W9 270 aa15.27■□□□□ 0.04
VAMP1-203ENST00000400911 FAM149AA5PLN7 773 aa15.26■□□□□ 0.03
VAMP1-203ENST00000400911 KCNK3O14649 394 aa15.26■□□□□ 0.03
VAMP1-203ENST00000400911 TIMM44O43615 452 aa15.26■□□□□ 0.03
VAMP1-203ENST00000400911 YEATS4O95619 227 aa15.26■□□□□ 0.03
VAMP1-203ENST00000400911 NR3C1P04150 777 aa15.26■□□□□ 0.03
VAMP1-203ENST00000400911 HLA-EP13747 358 aa15.26■□□□□ 0.03
VAMP1-203ENST00000400911 ARID5AQ03989 594 aa15.26■□□□□ 0.03
VAMP1-203ENST00000400911 EIF4HQ15056 248 aaKnown RBP15.26■□□□□ 0.03
VAMP1-203ENST00000400911 FOXD4L6Q3SYB3 417 aaPredicted RBP15.26■□□□□ 0.03
VAMP1-203ENST00000400911 PPP1R26Q5T8A7 1209 aaPredicted RBP15.26■□□□□ 0.03
VAMP1-203ENST00000400911 CEP135Q66GS9 1140 aa15.26■□□□□ 0.03
VAMP1-203ENST00000400911 FOXD4L3Q6VB84 417 aaPredicted RBP15.26■□□□□ 0.03
VAMP1-203ENST00000400911 BACH2Q9BYV9 841 aa15.26■□□□□ 0.03
VAMP1-203ENST00000400911 KCTD10Q9H3F6 313 aa15.26■□□□□ 0.03
VAMP1-203ENST00000400911 CYP3A43Q9HB55 503 aa15.26■□□□□ 0.03
VAMP1-203ENST00000400911 SCUBE2Q9NQ36 999 aa15.26■□□□□ 0.03
VAMP1-203ENST00000400911 MARCH2Q9P0N8 246 aa15.26■□□□□ 0.03
VAMP1-203ENST00000400911 DKK4Q9UBT3 224 aa15.26■□□□□ 0.03
VAMP1-203ENST00000400911 ANKRD6Q9Y2G4 727 aa15.26■□□□□ 0.03
VAMP1-203ENST00000400911 SLC12A8A0AV02 714 aa15.25■□□□□ 0.03
VAMP1-203ENST00000400911 KLRC4O43908 158 aa15.25■□□□□ 0.03
VAMP1-203ENST00000400911 ACSL1P33121 698 aa15.25■□□□□ 0.03
VAMP1-203ENST00000400911 E2F5Q15329 346 aa15.25■□□□□ 0.03
VAMP1-203ENST00000400911 ZNF394Q53GI3 561 aa15.25■□□□□ 0.03
VAMP1-203ENST00000400911 CCDC157Q569K6 752 aa15.25■□□□□ 0.03
VAMP1-203ENST00000400911 FOXD4L5Q5VV16 416 aaPredicted RBP15.25■□□□□ 0.03
VAMP1-203ENST00000400911 GALNT15Q8N3T1 639 aa15.25■□□□□ 0.03
VAMP1-203ENST00000400911 OR2T3Q8NH03 318 aa15.25■□□□□ 0.03
VAMP1-203ENST00000400911 FOXD4L4Q8WXT5 416 aaPredicted RBP15.25■□□□□ 0.03
VAMP1-203ENST00000400911 HEXIM2Q96MH2 286 aaKnown RBP15.25■□□□□ 0.03
VAMP1-203ENST00000400911 SLC2A11Q9BYW1 496 aa15.25■□□□□ 0.03
VAMP1-203ENST00000400911 PCED1AQ9H1Q7 454 aa15.25■□□□□ 0.03
VAMP1-203ENST00000400911 FAM13BQ9NYF5 915 aa15.25■□□□□ 0.03
VAMP1-203ENST00000400911 FRMD4BQ9Y2L6 1034 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms