RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 VPS28Q9UK41 221 aa11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 MRPS23Q9Y3D9 190 aaKnown RBP11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 SNX13Q9Y5W8 968 aa11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 FLT1P17948 1338 aa11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 VWA5AO00534 786 aa11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 ZNF37AP17032 561 aaPredicted RBP11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 RGS4P49798 205 aa11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 NEDD8Q15843 81 aa11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 PYHIN1Q6K0P9 492 aa11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 TMED8Q6PL24 325 aaPredicted RBP11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 CCDC54Q8NEL0 328 aa11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 TOR3AQ9H497 397 aa11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 PRMT7Q9NVM4 692 aaPredicted RBP11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 HDAC6Q9UBN7 1215 aa11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 EEF2KO00418 725 aaKnown RBP11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 TRIM38O00635 465 aa11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 KATNA1O75449 491 aa11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 IL18RAPO95256 599 aa11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 SCP2P22307 547 aa11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 BNIP2Q12982 314 aa11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 ZNF227Q86WZ6 799 aa11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 USP13Q92995 863 aaPredicted RBP11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 CYP4F12Q9HCS2 524 aa11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 LNPEPQ9UIQ6 1025 aa11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 RPAP1Q9BWH6 1393 aaPredicted RBP11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 ATP7BP35670 1465 aa11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 EFCAB10A6NFE3 127 aa11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 RCVRNP35243 200 aa11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 PNPLA4P41247 253 aa11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 EXOSC10Q01780 885 aaKnown RBP11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 NFIAQ12857 509 aa11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 BIKQ13323 160 aa11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 MTFR1Q15390 333 aa11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 OASLQ15646 514 aaKnown RBP11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 FOXP3Q9BZS1 431 aa11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 WDR19Q8NEZ3 1342 aa11.42□□□□□ -0.58
CACNA1C-217ENST00000399641 CARNS1A5YM72 827 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 POTEMA6NI47 508 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 PLOD2O00469 737 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 POMCP01189 267 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 PRKCEQ02156 737 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 SQLEQ14534 574 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 PPP2R2DQ66LE6 453 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 IQSEC1Q6DN90 963 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 POMZP3Q6PJE2 187 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 SRBD1Q8N5C6 995 aaKnown RBP11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 RIBC2Q9H4K1 309 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 SMARCAL1Q9NZC9 954 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 BFARQ9NZS9 450 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 BICRAQ9NZM4 1560 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 NMT2O60551 498 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 STX11O75558 287 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 FARP2O94887 1054 aaPredicted RBP11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 BCL10O95999 233 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 NT5C2P49902 561 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 C1DQ13901 141 aaKnown RBP11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 DDR2Q16832 855 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 GLRA4Q5JXX5 417 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 ATP6V1C2Q8NEY4 427 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 FBXO22Q8NEZ5 403 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 PPP1R13LQ8WUF5 828 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 CKAP2Q8WWK9 683 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 ZNF558Q96NG5 402 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 KCTD10Q9H3F6 313 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 NCDNQ9UBB6 729 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 CARD8Q9Y2G2 431 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 APRTP07741 180 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 POLR2EP19388 210 aaKnown RBP11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 MSR1P21757 451 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 OMPP47874 163 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 TGM3Q08188 693 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 MCOLN3Q8TDD5 553 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 ING5Q8WYH8 240 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 GSDMCQ9BYG8 508 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 TM6SF1Q9BZW5 370 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 EIF3LQ9Y262 564 aaKnown RBP11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 MRPS17Q9Y2R5 130 aaKnown RBP11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 C3orf70A6NLC5 250 aaPredicted RBP11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 STX16-NPEPL1H3BU86 382 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 STX16O14662 325 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 GHRP10912 638 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 HALP42357 657 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 KIRREL3Q8IZU9 778 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 PCYOX1LQ8NBM8 494 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 SSH3Q8TE77 659 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 RFT1Q96AA3 541 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 CDCA5Q96FF9 252 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 WWP1Q9H0M0 922 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 MAT2BQ9NZL9 334 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 A0A0X1KG70 313 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 SH2B2O14492 632 aaPredicted RBP11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 IRX1P78414 480 aaPredicted RBP11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 HSDL1Q3SXM5 330 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 NRSN1Q8IZ57 195 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 SEPHS2Q99611 448 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 RBBP8Q99708 897 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 BRD9Q9H8M2 597 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 TRIM36Q9NQ86 728 aa11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 TRMT6Q9UJA5 497 aaKnown RBP11.41□□□□□ -0.58
CACNA1C-217ENST00000399641 PSMD3O43242 534 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms