RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 LRRC8AQ8IWT6 810 aa12.93□□□□□ -0.34
HLA-DQB1-203ENST00000399082 BBS7Q8IWZ6 715 aa12.93□□□□□ -0.34
HLA-DQB1-203ENST00000399082 ACRBPQ8NEB7 543 aa12.93□□□□□ -0.34
HLA-DQB1-203ENST00000399082 TTC16Q8NEE8 873 aa12.93□□□□□ -0.34
HLA-DQB1-203ENST00000399082 CENPIQ92674 756 aaPredicted RBP12.93□□□□□ -0.34
HLA-DQB1-203ENST00000399082 E2F7Q96AV8 911 aa12.93□□□□□ -0.34
HLA-DQB1-203ENST00000399082 PGAP3Q96FM1 320 aaPredicted RBP12.93□□□□□ -0.34
HLA-DQB1-203ENST00000399082 MS4A3Q96HJ5 214 aa12.93□□□□□ -0.34
HLA-DQB1-203ENST00000399082 SERPINB11Q96P15 392 aa12.93□□□□□ -0.34
HLA-DQB1-203ENST00000399082 UHRF1Q96T88 793 aaPredicted RBP12.93□□□□□ -0.34
HLA-DQB1-203ENST00000399082 LINC00597Q9H2U6 94 aa12.93□□□□□ -0.34
HLA-DQB1-203ENST00000399082 HPS4Q9NQG7 708 aa12.93□□□□□ -0.34
HLA-DQB1-203ENST00000399082 PARVAQ9NVD7 372 aa12.93□□□□□ -0.34
HLA-DQB1-203ENST00000399082 XPO7Q9UIA9 1087 aaKnown RBP12.93□□□□□ -0.34
HLA-DQB1-203ENST00000399082 TLR6Q9Y2C9 796 aa12.93□□□□□ -0.34
HLA-DQB1-203ENST00000399082 WNT6Q9Y6F9 365 aa12.93□□□□□ -0.34
HLA-DQB1-203ENST00000399082 EPN1Q9Y6I3 576 aaPredicted RBP12.93□□□□□ -0.34
HLA-DQB1-203ENST00000399082 TTC28Q96AY4 2481 aa12.93□□□□□ -0.34
HLA-DQB1-203ENST00000399082 SYNJ2BP-COX16A0A087WUM0 186 aa12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 A0A0C4DFX4 3053 aa12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 A0A0U1RQJ8 604 aa12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 OTOL1A6NHN0 477 aaPredicted RBP12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 M0QYT0 321 aa12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 GFRA2O00451 464 aa12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 CCP110O43303 1012 aa12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 ARSAP15289 507 aa12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 PDGFRAP16234 1089 aa12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 GPD1P21695 349 aa12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 CORO1AP31146 461 aaKnown RBP12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 CYLC1P35663 651 aaPredicted RBP12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 SULT1E1P49888 294 aa12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 HDAC4P56524 1084 aa12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 TBX4P57082 545 aa12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 COG7P83436 770 aa12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 RING1Q06587 406 aa12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 TNK2Q07912 1038 aa12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 TDGQ13569 410 aa12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 EML3Q32P44 896 aa12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 ARTNQ5T4W7 220 aa12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 DDX42Q86XP3 938 aaKnown RBP eCLIP12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 CPNE8Q86YQ8 564 aa12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 ARFGAP1Q8N6T3 406 aa12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 KIAA1958Q8N8K9 716 aa12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 ATRIPQ8WXE1 791 aa12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 PLD4Q96BZ4 506 aa12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 CHFRQ96EP1 664 aa12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 FAM204AQ9H8W3 233 aa12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 DDIT4Q9NX09 232 aa12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 RRN3Q9NYV6 651 aa12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 COX16Q9P0S2 106 aa12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 MUTYHQ9UIF7 546 aa12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 AGO1Q9UL18 857 aaKnown RBP12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 DUSP12Q9UNI6 340 aa12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 SCINQ9Y6U3 715 aa12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 TRIOO75962 3097 aa12.92□□□□□ -0.34
HLA-DQB1-203ENST00000399082 NCOR1O75376 2440 aa12.91□□□□□ -0.34
HLA-DQB1-203ENST00000399082 SHISA7A6NL88 538 aa12.91□□□□□ -0.34
HLA-DQB1-203ENST00000399082 KCNU1A8MYU2 1149 aa12.91□□□□□ -0.34
HLA-DQB1-203ENST00000399082 GOLGA6L6A8MZA4 724 aa12.91□□□□□ -0.34
HLA-DQB1-203ENST00000399082 CHADO15335 359 aa12.91□□□□□ -0.34
HLA-DQB1-203ENST00000399082 GDI1P31150 447 aa12.91□□□□□ -0.34
HLA-DQB1-203ENST00000399082 MAGEA1P43355 309 aa12.91□□□□□ -0.34
HLA-DQB1-203ENST00000399082 CXCR3P49682 368 aa12.91□□□□□ -0.34
HLA-DQB1-203ENST00000399082 ZNF143P52747 638 aaPredicted RBP12.91□□□□□ -0.34
HLA-DQB1-203ENST00000399082 ATP11AP98196 1134 aa12.91□□□□□ -0.34
HLA-DQB1-203ENST00000399082 NME3Q13232 169 aa12.91□□□□□ -0.34
HLA-DQB1-203ENST00000399082 GAB4Q2WGN9 574 aa12.91□□□□□ -0.34
HLA-DQB1-203ENST00000399082 ZC3H12AQ5D1E8 599 aaKnown RBP12.91□□□□□ -0.34
HLA-DQB1-203ENST00000399082 NADSYN1Q6IA69 706 aa12.91□□□□□ -0.34
HLA-DQB1-203ENST00000399082 FAM217AQ8IXS0 508 aa12.91□□□□□ -0.34
HLA-DQB1-203ENST00000399082 OSCP1Q8WVF1 389 aa12.91□□□□□ -0.34
HLA-DQB1-203ENST00000399082 MYEOVQ96EZ4 313 aa12.91□□□□□ -0.34
HLA-DQB1-203ENST00000399082 BTBD6Q96KE9 485 aa12.91□□□□□ -0.34
HLA-DQB1-203ENST00000399082 DESI2Q9BSY9 194 aa12.91□□□□□ -0.34
HLA-DQB1-203ENST00000399082 TRMT61BQ9BVS5 477 aaKnown RBP12.91□□□□□ -0.34
HLA-DQB1-203ENST00000399082 NUP85Q9BW27 656 aa12.91□□□□□ -0.34
HLA-DQB1-203ENST00000399082 KCNF1Q9H3M0 494 aa12.91□□□□□ -0.34
HLA-DQB1-203ENST00000399082 OSGEPQ9NPF4 335 aa12.91□□□□□ -0.34
HLA-DQB1-203ENST00000399082 TMPRSS4Q9NRS4 437 aa12.91□□□□□ -0.34
HLA-DQB1-203ENST00000399082 SALL4Q9UJQ4 1053 aa12.91□□□□□ -0.34
HLA-DQB1-203ENST00000399082 STOML2Q9UJZ1 356 aa12.91□□□□□ -0.34
HLA-DQB1-203ENST00000399082 INTUQ9ULD6 942 aa12.91□□□□□ -0.34
HLA-DQB1-203ENST00000399082 STAP1Q9ULZ2 295 aa12.91□□□□□ -0.34
HLA-DQB1-203ENST00000399082 SORCS3Q9UPU3 1222 aa12.91□□□□□ -0.34
HLA-DQB1-203ENST00000399082 SH3BP1Q9Y3L3 701 aa12.91□□□□□ -0.34
HLA-DQB1-203ENST00000399082 PCDHA13Q9Y5I0 950 aa12.91□□□□□ -0.34
HLA-DQB1-203ENST00000399082 MYOFQ9NZM1 2061 aa12.91□□□□□ -0.34
HLA-DQB1-203ENST00000399082 BDP1A6H8Y1 2624 aa12.91□□□□□ -0.34
HLA-DQB1-203ENST00000399082 SRFP11831 508 aa12.9□□□□□ -0.34
HLA-DQB1-203ENST00000399082 SDC4P31431 198 aa12.9□□□□□ -0.34
HLA-DQB1-203ENST00000399082 RDXP35241 583 aaKnown RBP12.9□□□□□ -0.34
HLA-DQB1-203ENST00000399082 VCPP55072 806 aaKnown RBP12.9□□□□□ -0.34
HLA-DQB1-203ENST00000399082 DEUP1Q05D60 604 aa12.9□□□□□ -0.34
HLA-DQB1-203ENST00000399082 TCEAL1Q15170 157 aa12.9□□□□□ -0.34
HLA-DQB1-203ENST00000399082 CDO1Q16878 200 aa12.9□□□□□ -0.34
HLA-DQB1-203ENST00000399082 ARHGAP29Q52LW3 1261 aa12.9□□□□□ -0.34
HLA-DQB1-203ENST00000399082 FAM133BQ5BKY9 247 aaKnown RBP12.9□□□□□ -0.34
HLA-DQB1-203ENST00000399082 C10orf76Q5T2E6 689 aa12.9□□□□□ -0.34
HLA-DQB1-203ENST00000399082 DAB2IPQ5VWQ8 1189 aa12.9□□□□□ -0.34
HLA-DQB1-203ENST00000399082 DCUN1D2Q6PH85 259 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms