RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 ZNF668Q96K58 619 aaPredicted RBP8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 TMEM134Q9H6X4 195 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 FANCEQ9HB96 536 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 RGS18Q9NS28 235 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 UXTQ9UBK9 157 aaPredicted RBP8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 ITGB1BP2Q9UKP3 347 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 ZMYND8Q9ULU4 1186 aaPredicted RBP8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 TPRKBQ9Y3C4 175 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 TSC22D4Q9Y3Q8 395 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 A0A087WZ62 844 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 TCN1P20061 433 aaPredicted RBP8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 MSH3P20585 1137 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 PPP2R1BP30154 601 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 AVPR1AP37288 418 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 KCNJ1P48048 391 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 ALDH7A1P49419 539 aaKnown RBP8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 BACE1P56817 501 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 CREMQ03060 361 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 NFE2Q16621 373 aaPredicted RBP8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 OTOAQ7RTW8 1153 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 TMC3Q7Z5M5 1100 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 HS6ST3Q8IZP7 471 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 RDH11Q8TC12 318 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 GLMNQ92990 594 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 TRIM63Q969Q1 353 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 EXOSC4Q9NPD3 245 aaKnown RBP8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 PAPOLBQ9NRJ5 636 aaKnown RBP8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 TMEM216Q9P0N5 145 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 FGF10O15520 208 aaPredicted RBP8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 CLPTM1O96005 669 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 EIF4BP23588 611 aaKnown RBP8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 HPCAL1P37235 193 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 TSNQ15631 228 aaKnown RBP8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 NET1Q7Z628 596 aaPredicted RBP8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 TMEM86AQ8N2M4 240 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 TMEM132CQ8N3T6 1108 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 BLOC1S5Q8TDH9 187 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 MRPS31Q92665 395 aaKnown RBP8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 SMARCD1Q96GM5 515 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 SERPINB11Q96P15 392 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 MCCC1Q96RQ3 725 aaPredicted RBP8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 GGA3Q9NZ52 723 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 CROTQ9UKG9 612 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 PCDHA11Q9Y5I1 949 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 ARHGEF28Q8N1W1 1705 aaKnown RBP8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 ADGRB1O14514 1584 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 ADAMTS13Q76LX8 1427 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 MGAT4DA6NG13 374 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 NR5A2O00482 541 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 PLA2G6O60733 806 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 CYP1A1P04798 512 aaPredicted RBP8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 TTKP33981 857 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 TALDO1P37837 337 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 GMPSP49915 693 aaPredicted RBP8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 PMS1P54277 932 aaKnown RBP8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 CDK16Q00536 496 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 XRCC4Q13426 336 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 RRP1BQ14684 758 aaKnown RBP8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 FAM182BQ5T319 152 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 LRRC38Q5VT99 294 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 FAM83AQ86UY5 434 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 RPRD1AQ96P16 312 aaPredicted RBP8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 IL1RL2Q9HB29 575 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 SENP2Q9HC62 589 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 GPAMQ9HCL2 828 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 CISHQ9NSE2 258 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 CAPN6Q9Y6Q1 641 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 PNMA8CA0A1B0GUJ8 204 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 TCRBV5S4A2TA0A5A2 114 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 ZBTB39O15060 712 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 MYL4P12829 197 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 PKN1Q16512 942 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 HIC2Q96JB3 615 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 TMEM237Q96Q45 408 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 LBHD1Q9BQE6 289 aaPredicted RBP8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 YIPF2Q9BWQ6 316 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 ADPRHL2Q9NX46 363 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 KLHL28Q9NXS3 571 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 USE1Q9NZ43 259 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 PDE9AO76083 593 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 THP07101 528 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 PLEKP08567 350 aaPredicted RBP8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 MBL2P11226 248 aaPredicted RBP8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 PABPC1P11940 636 aaKnown RBP8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 CCR1P32246 355 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 PGM5Q15124 567 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 PGS1Q32NB8 556 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 ERAP2Q6P179 960 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 USP49Q70CQ1 688 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 MTDHQ86UE4 582 aaKnown RBP8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 IFNEQ86WN2 208 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 DHFR2Q86XF0 187 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 CBWD2Q8IUF1 395 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 MIER2Q8N344 545 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 BSNDQ8WZ55 320 aa8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 FAM120BQ96EK7 910 aaKnown RBP8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 KLF6Q99612 283 aaPredicted RBP8.57□□□□□ -1.04
SPTLC3-201ENST00000399002 BBS2Q9BXC9 721 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms