RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 STAP1Q9ULZ2 295 aa14.32□□□□□ -0.12
PRAME-202ENST00000398743 TRIM49D1C9J1S8 452 aa14.32□□□□□ -0.12
PRAME-202ENST00000398743 CLDN5O00501 218 aa14.32□□□□□ -0.12
PRAME-202ENST00000398743 DGKIO75912 1065 aa14.32□□□□□ -0.12
PRAME-202ENST00000398743 FAM155BO75949 473 aa14.32□□□□□ -0.12
PRAME-202ENST00000398743 DHRS4L1P0CG22 281 aa14.32□□□□□ -0.12
PRAME-202ENST00000398743 NOS2P35228 1153 aa14.32□□□□□ -0.12
PRAME-202ENST00000398743 ETV4P43268 484 aa14.32□□□□□ -0.12
PRAME-202ENST00000398743 SARNPP82979 210 aaKnown RBP14.32□□□□□ -0.12
PRAME-202ENST00000398743 SWT1Q5T5J6 900 aaKnown RBP14.32□□□□□ -0.12
PRAME-202ENST00000398743 UNC5AQ6ZN44 842 aa14.32□□□□□ -0.12
PRAME-202ENST00000398743 FAM228AQ86W67 206 aa14.32□□□□□ -0.12
PRAME-202ENST00000398743 CHSY1Q86X52 802 aa14.32□□□□□ -0.12
PRAME-202ENST00000398743 HACE1Q8IYU2 909 aa14.32□□□□□ -0.12
PRAME-202ENST00000398743 SIX6OS1Q8N1H7 587 aa14.32□□□□□ -0.12
PRAME-202ENST00000398743 GSDMBQ8TAX9 411 aa14.32□□□□□ -0.12
PRAME-202ENST00000398743 ZNF398Q8TD17 642 aa14.32□□□□□ -0.12
PRAME-202ENST00000398743 MAGEC3Q8TD91 643 aa14.32□□□□□ -0.12
PRAME-202ENST00000398743 KCTD13Q8WZ19 329 aa14.32□□□□□ -0.12
PRAME-202ENST00000398743 NDRG1Q92597 394 aaKnown RBP14.32□□□□□ -0.12
PRAME-202ENST00000398743 SIGLEC10Q96LC7 697 aa14.32□□□□□ -0.12
PRAME-202ENST00000398743 FAM111AQ96PZ2 611 aa14.32□□□□□ -0.12
PRAME-202ENST00000398743 PPP1R10Q96QC0 940 aaKnown RBP14.32□□□□□ -0.12
PRAME-202ENST00000398743 EBNA1BP2Q99848 306 aaKnown RBP14.32□□□□□ -0.12
PRAME-202ENST00000398743 ARHGEF4Q9NR80 690 aa14.32□□□□□ -0.12
PRAME-202ENST00000398743 MFHAS1Q9Y4C4 1052 aa14.32□□□□□ -0.12
PRAME-202ENST00000398743 MAD1L1Q9Y6D9 718 aa14.32□□□□□ -0.12
PRAME-202ENST00000398743 CXorf49A8MYA2 514 aaPredicted RBP14.31□□□□□ -0.12
PRAME-202ENST00000398743 COPEO14579 308 aa14.31□□□□□ -0.12
PRAME-202ENST00000398743 ATP5HO75947 161 aa14.31□□□□□ -0.12
PRAME-202ENST00000398743 BEST1O76090 585 aa14.31□□□□□ -0.12
PRAME-202ENST00000398743 FAM163BP0C2L3 166 aa14.31□□□□□ -0.12
PRAME-202ENST00000398743 VAV1P15498 845 aa14.31□□□□□ -0.12
PRAME-202ENST00000398743 CYP2B6P20813 491 aa14.31□□□□□ -0.12
PRAME-202ENST00000398743 HOXC8P31273 242 aa14.31□□□□□ -0.12
PRAME-202ENST00000398743 RIPK1Q13546 671 aa14.31□□□□□ -0.12
PRAME-202ENST00000398743 FSCN1Q16658 493 aaKnown RBP14.31□□□□□ -0.12
PRAME-202ENST00000398743 WSCD1Q658N2 575 aa14.31□□□□□ -0.12
PRAME-202ENST00000398743 TAF2Q6P1X5 1199 aa14.31□□□□□ -0.12
PRAME-202ENST00000398743 CLEC20AQ6ZU45 233 aa14.31□□□□□ -0.12
PRAME-202ENST00000398743 KIF2BQ8N4N8 673 aa14.31□□□□□ -0.12
PRAME-202ENST00000398743 APBB2Q92870 758 aa14.31□□□□□ -0.12
PRAME-202ENST00000398743 NT5C3BQ969T7 300 aa14.31□□□□□ -0.12
PRAME-202ENST00000398743 ZFP42Q96MM3 310 aa14.31□□□□□ -0.12
PRAME-202ENST00000398743 MED10Q9BTT4 135 aa14.31□□□□□ -0.12
PRAME-202ENST00000398743 NPHS2Q9NP85 383 aa14.31□□□□□ -0.12
PRAME-202ENST00000398743 BAIAP2L1Q9UHR4 511 aa14.31□□□□□ -0.12
PRAME-202ENST00000398743 SYNJ2BP-COX16A0A087WUM0 186 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 A0A0A0MRY4 1105 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 H3BRJ5 948 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 C2CD2LO14523 706 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 GABRDO14764 452 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 MFSD11O43934 449 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 KRT38O76015 456 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 FDFT1P37268 417 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 PURAQ00577 322 aaKnown RBP14.3□□□□□ -0.12
PRAME-202ENST00000398743 MDH1BQ5I0G3 518 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 ANKRD20A2Q5SQ80 823 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 ANKRD20A1Q5TYW2 823 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 ANKRD20A3Q5VUR7 823 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 OTUD1Q5VV17 481 aaPredicted RBP14.3□□□□□ -0.12
PRAME-202ENST00000398743 DENND5BQ6ZUT9 1274 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 PAQR9Q6ZVX9 377 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 BNIPLQ7Z465 357 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 RNF139Q8WU17 664 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 PTPRN2Q92932 1015 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 TTC17Q96AE7 1141 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 SPATA13Q96N96 652 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 NPY6RQ99463 290 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 FERMT1Q9BQL6 677 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 TSSK1BQ9BXA7 367 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 NOD2Q9HC29 1040 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 SLC38A7Q9NVC3 462 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 COX16Q9P0S2 106 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 M0QYT0 321 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 STK10O94804 968 aaKnown RBP14.3□□□□□ -0.12
PRAME-202ENST00000398743 FAM200BP0CF97 657 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 NEFHP12036 1026 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 SLC8A1P32418 973 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 RGS2P41220 211 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 PITX1P78337 314 aaPredicted RBP14.3□□□□□ -0.12
PRAME-202ENST00000398743 CDK16Q00536 496 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 TAF1CQ15572 869 aaPredicted RBP14.3□□□□□ -0.12
PRAME-202ENST00000398743 MPP5Q8N3R9 675 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 MTBPQ96DY7 904 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 SRPK1Q96SB4 655 aaKnown RBP14.3□□□□□ -0.12
PRAME-202ENST00000398743 LGMNQ99538 433 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 TSPYL2Q9H2G4 693 aaPredicted RBP14.3□□□□□ -0.12
PRAME-202ENST00000398743 ALG13Q9NP73 1137 aaKnown RBP14.3□□□□□ -0.12
PRAME-202ENST00000398743 SMYD2Q9NRG4 433 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 DDX43Q9NXZ2 648 aaKnown RBP14.3□□□□□ -0.12
PRAME-202ENST00000398743 PCDHA11Q9Y5I1 949 aa14.3□□□□□ -0.12
PRAME-202ENST00000398743 SF3B1O75533 1304 aaKnown RBP eCLIP14.29□□□□□ -0.124e-6■■■□□ 15.7
PRAME-202ENST00000398743 FAM159BA6NKW6 160 aa14.29□□□□□ -0.12
PRAME-202ENST00000398743 M0QZ92 97 aa14.29□□□□□ -0.12
PRAME-202ENST00000398743 KRT16P08779 473 aa14.29□□□□□ -0.12
PRAME-202ENST00000398743 CSH1P0DML2 217 aa14.29□□□□□ -0.12
PRAME-202ENST00000398743 CSH2P0DML3 217 aa14.29□□□□□ -0.12
PRAME-202ENST00000398743 GRIA1P42261 906 aa14.29□□□□□ -0.12
PRAME-202ENST00000398743 NDUFV1P49821 464 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms