RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 P3H1Q32P28 736 aa19.06■□□□□ 0.64
MBD1-208ENST00000398493 ANKS3Q6ZW76 656 aa19.06■□□□□ 0.64
MBD1-208ENST00000398493 VSIG1Q86XK7 387 aa19.06■□□□□ 0.64
MBD1-208ENST00000398493 SH2D3CQ8N5H7 860 aa19.06■□□□□ 0.64
MBD1-208ENST00000398493 ACTL9Q8TC94 416 aa19.06■□□□□ 0.64
MBD1-208ENST00000398493 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.06■□□□□ 0.64
MBD1-208ENST00000398493 RSAD2Q8WXG1 361 aa19.06■□□□□ 0.64
MBD1-208ENST00000398493 HAUS1Q96CS2 278 aa19.06■□□□□ 0.64
MBD1-208ENST00000398493 PIWIL1Q96J94 861 aaKnown RBP19.06■□□□□ 0.64
MBD1-208ENST00000398493 MED10Q9BTT4 135 aa19.06■□□□□ 0.64
MBD1-208ENST00000398493 TMEM109Q9BVC6 243 aa19.06■□□□□ 0.64
MBD1-208ENST00000398493 ROPN1BQ9BZX4 212 aaPredicted RBP19.06■□□□□ 0.64
MBD1-208ENST00000398493 STMN4Q9H169 189 aaPredicted RBP19.06■□□□□ 0.64
MBD1-208ENST00000398493 ROPN1Q9HAT0 212 aaPredicted RBP19.06■□□□□ 0.64
MBD1-208ENST00000398493 PCDH9Q9HC56 1237 aa19.06■□□□□ 0.64
MBD1-208ENST00000398493 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.06■□□□□ 0.64
MBD1-208ENST00000398493 MTRRQ9UBK8 725 aa19.06■□□□□ 0.64
MBD1-208ENST00000398493 STK39Q9UEW8 545 aa19.06■□□□□ 0.64
MBD1-208ENST00000398493 DSEQ9UL01 958 aa19.06■□□□□ 0.64
MBD1-208ENST00000398493 TPX2Q9ULW0 747 aaKnown RBP19.06■□□□□ 0.64
MBD1-208ENST00000398493 IRAK3Q9Y616 596 aa19.06■□□□□ 0.64
MBD1-208ENST00000398493 TEX28O15482 410 aa19.05■□□□□ 0.64
MBD1-208ENST00000398493 SHOX2O60902 331 aaPredicted RBP19.05■□□□□ 0.64
MBD1-208ENST00000398493 CTXN3Q4LDR2 81 aa19.05■□□□□ 0.64
MBD1-208ENST00000398493 SH3PXD2AQ5TCZ1 1133 aa19.05■□□□□ 0.64
MBD1-208ENST00000398493 TRNP1Q6NT89 227 aa19.05■□□□□ 0.64
MBD1-208ENST00000398493 HIBCHQ6NVY1 386 aaPredicted RBP19.05■□□□□ 0.64
MBD1-208ENST00000398493 LRRTM3Q86VH5 581 aa19.05■□□□□ 0.64
MBD1-208ENST00000398493 METTL23Q86XA0 190 aa19.05■□□□□ 0.64
MBD1-208ENST00000398493 KHSRPQ92945 711 aaKnown RBP eCLIP19.05■□□□□ 0.64
MBD1-208ENST00000398493 MRPL38Q96DV4 380 aaKnown RBP19.05■□□□□ 0.64
MBD1-208ENST00000398493 B3GNT5Q9BYG0 378 aa19.05■□□□□ 0.64
MBD1-208ENST00000398493 LMAN2LQ9H0V9 348 aa19.05■□□□□ 0.64
MBD1-208ENST00000398493 EPB41L4BQ9H329 900 aa19.05■□□□□ 0.64
MBD1-208ENST00000398493 RXFP1Q9HBX9 757 aa19.05■□□□□ 0.64
MBD1-208ENST00000398493 CDY1Q9Y6F8 540 aa19.05■□□□□ 0.64
MBD1-208ENST00000398493 COL4A4P53420 1690 aaPredicted RBP19.05■□□□□ 0.64
MBD1-208ENST00000398493 PER2O15055 1255 aa19.04■□□□□ 0.64
MBD1-208ENST00000398493 MCF2LO15068 1137 aa19.04■□□□□ 0.64
MBD1-208ENST00000398493 ATP2C2O75185 946 aa19.04■□□□□ 0.64
MBD1-208ENST00000398493 GPS1Q13098 491 aa19.04■□□□□ 0.64
MBD1-208ENST00000398493 TAF5Q15542 800 aa19.04■□□□□ 0.64
MBD1-208ENST00000398493 DNAJC21Q5F1R6 531 aaKnown RBP19.04■□□□□ 0.64
MBD1-208ENST00000398493 GPR153Q6NV75 609 aa19.04■□□□□ 0.64
MBD1-208ENST00000398493 RBM23Q86U06 439 aaKnown RBP19.04■□□□□ 0.64
MBD1-208ENST00000398493 SPATA18Q8TC71 538 aa19.04■□□□□ 0.64
MBD1-208ENST00000398493 KLHL5Q96PQ7 755 aa19.04■□□□□ 0.64
MBD1-208ENST00000398493 PEBP4Q96S96 227 aa19.04■□□□□ 0.64
MBD1-208ENST00000398493 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.04■□□□□ 0.64
MBD1-208ENST00000398493 BACE2Q9Y5Z0 518 aa19.04■□□□□ 0.64
MBD1-208ENST00000398493 PRRC2BQ5JSZ5 2229 aaKnown RBP19.04■□□□□ 0.64
MBD1-208ENST00000398493 TSC2P49815 1807 aa19.04■□□□□ 0.64
MBD1-208ENST00000398493 MDM4O15151 490 aa19.04■□□□□ 0.64
MBD1-208ENST00000398493 TP73O15350 636 aa19.04■□□□□ 0.64
MBD1-208ENST00000398493 CD48P09326 243 aa19.04■□□□□ 0.64
MBD1-208ENST00000398493 NPR3P17342 541 aa19.04■□□□□ 0.64
MBD1-208ENST00000398493 OR1D2P34982 312 aa19.04■□□□□ 0.64
MBD1-208ENST00000398493 ARPP19P56211 112 aa19.04■□□□□ 0.64
MBD1-208ENST00000398493 ZNF280DQ6N043 979 aa19.04■□□□□ 0.64
MBD1-208ENST00000398493 DEFB123Q8N688 67 aa19.04■□□□□ 0.64
MBD1-208ENST00000398493 KCTD13Q8WZ19 329 aa19.04■□□□□ 0.64
MBD1-208ENST00000398493 P3H4Q92791 437 aa19.04■□□□□ 0.64
MBD1-208ENST00000398493 TMEM121Q9BTD3 319 aa19.04■□□□□ 0.64
MBD1-208ENST00000398493 DDX23Q9BUQ8 820 aaKnown RBP19.04■□□□□ 0.64
MBD1-208ENST00000398493 CDC42EP4Q9H3Q1 356 aaKnown RBP19.04■□□□□ 0.64
MBD1-208ENST00000398493 LRRC4Q9HBW1 653 aa19.04■□□□□ 0.64
MBD1-208ENST00000398493 NOVA2Q9UNW9 492 aaKnown RBP19.04■□□□□ 0.64
MBD1-208ENST00000398493 MTCH2Q9Y6C9 303 aa19.04■□□□□ 0.64
MBD1-208ENST00000398493 PRUNE2Q8WUY3 3088 aa19.04■□□□□ 0.64
MBD1-208ENST00000398493 ARHGEF37A1IGU5 675 aa19.03■□□□□ 0.64
MBD1-208ENST00000398493 GABBR2O75899 941 aa19.03■□□□□ 0.64
MBD1-208ENST00000398493 TTC4O95801 387 aa19.03■□□□□ 0.64
MBD1-208ENST00000398493 IFNB1P01574 187 aa19.03■□□□□ 0.64
MBD1-208ENST00000398493 PCSK1P29120 753 aa19.03■□□□□ 0.64
MBD1-208ENST00000398493 STIP1P31948 543 aaKnown RBP19.03■□□□□ 0.64
MBD1-208ENST00000398493 EIF3EP60228 445 aaKnown RBP19.03■□□□□ 0.64
MBD1-208ENST00000398493 DPYSL3Q14195 570 aa19.03■□□□□ 0.64
MBD1-208ENST00000398493 MORF4L2Q15014 288 aa19.03■□□□□ 0.64
MBD1-208ENST00000398493 ERMARDQ5T6L9 678 aa19.03■□□□□ 0.64
MBD1-208ENST00000398493 SLC8B1Q6J4K2 584 aa19.03■□□□□ 0.64
MBD1-208ENST00000398493 PIGZQ86VD9 579 aa19.03■□□□□ 0.64
MBD1-208ENST00000398493 RELL1Q8IUW5 271 aa19.03■□□□□ 0.64
MBD1-208ENST00000398493 FUKQ8N0W3 1084 aa19.03■□□□□ 0.64
MBD1-208ENST00000398493 ZCCHC9Q8N567 271 aaKnown RBP19.03■□□□□ 0.64
MBD1-208ENST00000398493 PGM2Q96G03 612 aa19.03■□□□□ 0.64
MBD1-208ENST00000398493 GUCD1Q96NT3 240 aa19.03■□□□□ 0.64
MBD1-208ENST00000398493 RNF157Q96PX1 679 aa19.03■□□□□ 0.64
MBD1-208ENST00000398493 CDX2Q99626 313 aaPredicted RBP19.03■□□□□ 0.64
MBD1-208ENST00000398493 CCDC77Q9BR77 488 aa19.03■□□□□ 0.64
MBD1-208ENST00000398493 TMLHEQ9NVH6 421 aa19.03■□□□□ 0.64
MBD1-208ENST00000398493 CDH9Q9ULB4 789 aa19.03■□□□□ 0.64
MBD1-208ENST00000398493 TLDC2A0PJX2 215 aa19.02■□□□□ 0.64
MBD1-208ENST00000398493 MYBPHLA2RUH7 354 aa19.02■□□□□ 0.64
MBD1-208ENST00000398493 ZNF487B1APH4 448 aa19.02■□□□□ 0.64
MBD1-208ENST00000398493 H7C4K7 107 aa19.02■□□□□ 0.64
MBD1-208ENST00000398493 RGS16O15492 202 aaPredicted RBP19.02■□□□□ 0.64
MBD1-208ENST00000398493 FAM200BP0CF97 657 aa19.02■□□□□ 0.64
MBD1-208ENST00000398493 CHKAP35790 457 aa19.02■□□□□ 0.64
MBD1-208ENST00000398493 SKIDA1Q1XH10 827 aa19.02■□□□□ 0.64
MBD1-208ENST00000398493 MDH1BQ5I0G3 518 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms