RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 ADGRF1Q5T601 910 aa14.88□□□□□ -0.03
HDDC2-202ENST00000398153 TAF3Q5VWG9 929 aa14.88□□□□□ -0.03
HDDC2-202ENST00000398153 OR6B2Q6IFH4 312 aa14.88□□□□□ -0.03
HDDC2-202ENST00000398153 DENND1CQ8IV53 801 aa14.88□□□□□ -0.03
HDDC2-202ENST00000398153 DQX1Q8TE96 717 aaKnown RBP14.88□□□□□ -0.03
HDDC2-202ENST00000398153 SLC2A13Q96QE2 648 aa14.88□□□□□ -0.03
HDDC2-202ENST00000398153 DDX50Q9BQ39 737 aaKnown RBP14.88□□□□□ -0.03
HDDC2-202ENST00000398153 BBS2Q9BXC9 721 aa14.88□□□□□ -0.03
HDDC2-202ENST00000398153 NUCKS1Q9H1E3 243 aaKnown RBP14.88□□□□□ -0.03
HDDC2-202ENST00000398153 FBRSL1Q9HCM7 1045 aaKnown RBP14.88□□□□□ -0.03
HDDC2-202ENST00000398153 PRMT8Q9NR22 394 aaPredicted RBP14.88□□□□□ -0.03
HDDC2-202ENST00000398153 NAALADL1Q9UQQ1 740 aa14.88□□□□□ -0.03
HDDC2-202ENST00000398153 H0Y858 1186 aa14.87□□□□□ -0.03
HDDC2-202ENST00000398153 SCAMP3O14828 347 aaKnown RBP14.87□□□□□ -0.03
HDDC2-202ENST00000398153 KAT7O95251 611 aa14.87□□□□□ -0.03
HDDC2-202ENST00000398153 EGFP01133 1207 aa14.87□□□□□ -0.03
HDDC2-202ENST00000398153 PENKP01210 267 aaPredicted RBP14.87□□□□□ -0.03
HDDC2-202ENST00000398153 IGLV3-25P01717 112 aa14.87□□□□□ -0.03
HDDC2-202ENST00000398153 ERBB2P04626 1255 aa14.87□□□□□ -0.03
HDDC2-202ENST00000398153 HMBSP08397 361 aa14.87□□□□□ -0.03
HDDC2-202ENST00000398153 TYRP14679 529 aa14.87□□□□□ -0.03
HDDC2-202ENST00000398153 HOXA6P31267 233 aa14.87□□□□□ -0.03
HDDC2-202ENST00000398153 NOS2P35228 1153 aa14.87□□□□□ -0.03
HDDC2-202ENST00000398153 MRPS21P82921 87 aaKnown RBP14.87□□□□□ -0.03
HDDC2-202ENST00000398153 CDK17Q00537 523 aa14.87□□□□□ -0.03
HDDC2-202ENST00000398153 FMO1Q01740 532 aa14.87□□□□□ -0.03
HDDC2-202ENST00000398153 NHLH1Q02575 133 aa14.87□□□□□ -0.03
HDDC2-202ENST00000398153 EIF4EBP2Q13542 120 aaPredicted RBP14.87□□□□□ -0.03
HDDC2-202ENST00000398153 MPPE1Q53F39 396 aa14.87□□□□□ -0.03
HDDC2-202ENST00000398153 DCAF6Q58WW2 860 aa14.87□□□□□ -0.03
HDDC2-202ENST00000398153 MPP7Q5T2T1 576 aa14.87□□□□□ -0.03
HDDC2-202ENST00000398153 SYPL2Q5VXT5 272 aa14.87□□□□□ -0.03
HDDC2-202ENST00000398153 ZC3H14Q6PJT7 736 aaKnown RBP14.87□□□□□ -0.03
HDDC2-202ENST00000398153 FAM183BPQ6ZVS7 135 aa14.87□□□□□ -0.03
HDDC2-202ENST00000398153 ZNF557Q8N988 423 aaPredicted RBP14.87□□□□□ -0.03
HDDC2-202ENST00000398153 BAP1Q92560 729 aa14.87□□□□□ -0.03
HDDC2-202ENST00000398153 ACDQ96AP0 544 aa14.87□□□□□ -0.03
HDDC2-202ENST00000398153 SLC39A13Q96H72 371 aa14.87□□□□□ -0.03
HDDC2-202ENST00000398153 SLC2A11Q9BYW1 496 aa14.87□□□□□ -0.03
HDDC2-202ENST00000398153 SEMA4AQ9H3S1 761 aa14.87□□□□□ -0.03
HDDC2-202ENST00000398153 ARHGEF4Q9NR80 690 aa14.87□□□□□ -0.03
HDDC2-202ENST00000398153 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.87□□□□□ -0.03
HDDC2-202ENST00000398153 AIPL1Q9NZN9 384 aa14.87□□□□□ -0.03
HDDC2-202ENST00000398153 FBXO10Q9UK96 956 aa14.87□□□□□ -0.03
HDDC2-202ENST00000398153 MUC6Q6W4X9 2439 aa14.87□□□□□ -0.03
HDDC2-202ENST00000398153 KIAA1549LQ6ZVL6 1849 aa14.87□□□□□ -0.03
HDDC2-202ENST00000398153 A0A1W2PQJ5 194 aa14.86□□□□□ -0.03
HDDC2-202ENST00000398153 NEDD8-MDP1E9PL57 170 aa14.86□□□□□ -0.03
HDDC2-202ENST00000398153 MSI1O43347 362 aaKnown RBP14.86□□□□□ -0.03
HDDC2-202ENST00000398153 TULP3O75386 442 aa14.86□□□□□ -0.03
HDDC2-202ENST00000398153 TRUB2O95900 331 aaKnown RBP14.86□□□□□ -0.03
HDDC2-202ENST00000398153 UNGP13051 313 aaPredicted RBP14.86□□□□□ -0.03
HDDC2-202ENST00000398153 CHRNB2P17787 502 aa14.86□□□□□ -0.03
HDDC2-202ENST00000398153 MMP8P22894 467 aa14.86□□□□□ -0.03
HDDC2-202ENST00000398153 MATKP42679 507 aa14.86□□□□□ -0.03
HDDC2-202ENST00000398153 GSCP56915 257 aaPredicted RBP14.86□□□□□ -0.03
HDDC2-202ENST00000398153 CENPCQ03188 943 aa14.86□□□□□ -0.03
HDDC2-202ENST00000398153 GAS6Q14393 721 aa14.86□□□□□ -0.03
HDDC2-202ENST00000398153 ACBD5Q5T8D3 534 aaPredicted RBP14.86□□□□□ -0.03
HDDC2-202ENST00000398153 TPGS1Q6ZTW0 290 aa14.86□□□□□ -0.03
HDDC2-202ENST00000398153 IRF2BP2Q7Z5L9 587 aa14.86□□□□□ -0.03
HDDC2-202ENST00000398153 MAML2Q8IZL2 1156 aaPredicted RBP14.86□□□□□ -0.03
HDDC2-202ENST00000398153 DEFB106AQ8N104 65 aa14.86□□□□□ -0.03
HDDC2-202ENST00000398153 PHTF2Q8N3S3 785 aa14.86□□□□□ -0.03
HDDC2-202ENST00000398153 SLC20A1Q8WUM9 679 aa14.86□□□□□ -0.03
HDDC2-202ENST00000398153 NELL1Q92832 810 aa14.86□□□□□ -0.03
HDDC2-202ENST00000398153 ATOH1Q92858 354 aaPredicted RBP14.86□□□□□ -0.03
HDDC2-202ENST00000398153 AGPAT1Q99943 283 aa14.86□□□□□ -0.03
HDDC2-202ENST00000398153 TTYH3Q9C0H2 523 aa14.86□□□□□ -0.03
HDDC2-202ENST00000398153 RBM12Q9NTZ6 932 aaKnown RBP14.86□□□□□ -0.03
HDDC2-202ENST00000398153 TJP2Q9UDY2 1190 aa14.86□□□□□ -0.03
HDDC2-202ENST00000398153 RAPGEFL1Q9UHV5 662 aa14.86□□□□□ -0.03
HDDC2-202ENST00000398153 SLC12A6Q9UHW9 1150 aa14.86□□□□□ -0.03
HDDC2-202ENST00000398153 STAP1Q9ULZ2 295 aa14.86□□□□□ -0.03
HDDC2-202ENST00000398153 SLC27A6Q9Y2P4 619 aa14.86□□□□□ -0.03
HDDC2-202ENST00000398153 STARD13Q9Y3M8 1113 aa14.86□□□□□ -0.03
HDDC2-202ENST00000398153 PAXBP1Q9Y5B6 917 aa14.86□□□□□ -0.03
HDDC2-202ENST00000398153 MYOFQ9NZM1 2061 aa14.86□□□□□ -0.03
HDDC2-202ENST00000398153 K7EQS6 105 aa14.85□□□□□ -0.03
HDDC2-202ENST00000398153 GFRA2O00451 464 aa14.85□□□□□ -0.03
HDDC2-202ENST00000398153 CBFA2T2O43439 604 aa14.85□□□□□ -0.03
HDDC2-202ENST00000398153 ACSL4O60488 711 aa14.85□□□□□ -0.03
HDDC2-202ENST00000398153 RNF40O75150 1001 aa14.85□□□□□ -0.03
HDDC2-202ENST00000398153 DAB1O75553 588 aa14.85□□□□□ -0.03
HDDC2-202ENST00000398153 F9P00740 461 aa14.85□□□□□ -0.03
HDDC2-202ENST00000398153 APOEP02649 317 aa14.85□□□□□ -0.03
HDDC2-202ENST00000398153 SP9P0CG40 484 aa14.85□□□□□ -0.03
HDDC2-202ENST00000398153 PLA2G5P39877 138 aa14.85□□□□□ -0.03
HDDC2-202ENST00000398153 PBX1P40424 430 aa14.85□□□□□ -0.03
HDDC2-202ENST00000398153 NBL1P41271 181 aa14.85□□□□□ -0.03
HDDC2-202ENST00000398153 PRKCIP41743 596 aa14.85□□□□□ -0.03
HDDC2-202ENST00000398153 NSFP46459 744 aaKnown RBP14.85□□□□□ -0.03
HDDC2-202ENST00000398153 SLC6A11P48066 632 aa14.85□□□□□ -0.03
HDDC2-202ENST00000398153 ARID5AQ03989 594 aa14.85□□□□□ -0.03
HDDC2-202ENST00000398153 TAF5Q15542 800 aa14.85□□□□□ -0.03
HDDC2-202ENST00000398153 FYB2Q5VWT5 728 aa14.85□□□□□ -0.03
HDDC2-202ENST00000398153 NAA35Q5VZE5 725 aa14.85□□□□□ -0.03
HDDC2-202ENST00000398153 GRAMD4Q6IC98 578 aa14.85□□□□□ -0.03
HDDC2-202ENST00000398153 SYT13Q7L8C5 426 aa14.85□□□□□ -0.03
HDDC2-202ENST00000398153 TRMT11Q7Z4G4 463 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms