RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 SPOCD1Q6ZMY3 1216 aa11.66□□□□□ -0.54
TTC28-201ENST00000397906 CNDP1Q96KN2 507 aa11.66□□□□□ -0.54
TTC28-201ENST00000397906 ELOVL6Q9H5J4 265 aa11.66□□□□□ -0.54
TTC28-201ENST00000397906 MAN1A2O60476 641 aa11.66□□□□□ -0.54
TTC28-201ENST00000397906 MT-CO1P00395 513 aa11.66□□□□□ -0.54
TTC28-201ENST00000397906 LTFP02788 710 aa11.66□□□□□ -0.54
TTC28-201ENST00000397906 TUFMP49411 452 aaKnown RBP11.66□□□□□ -0.54
TTC28-201ENST00000397906 XRCC4Q13426 336 aa11.66□□□□□ -0.54
TTC28-201ENST00000397906 INSCQ1MX18 579 aa11.66□□□□□ -0.54
TTC28-201ENST00000397906 OTOP1Q7RTM1 612 aa11.66□□□□□ -0.54
TTC28-201ENST00000397906 EPS8L3Q8TE67 593 aaKnown RBP11.66□□□□□ -0.54
TTC28-201ENST00000397906 RMND5AQ9H871 391 aa11.66□□□□□ -0.54
TTC28-201ENST00000397906 A0A0A6YYK5 440 aaPredicted RBP11.66□□□□□ -0.54
TTC28-201ENST00000397906 TCRBV5S4A2TA0A5A2 114 aa11.66□□□□□ -0.54
TTC28-201ENST00000397906 ENO2P09104 434 aaPredicted RBP11.66□□□□□ -0.54
TTC28-201ENST00000397906 GTF2E2P29084 291 aaKnown RBP11.66□□□□□ -0.54
TTC28-201ENST00000397906 ERP27Q96DN0 273 aa11.66□□□□□ -0.54
TTC28-201ENST00000397906 CTNNAL1Q9UBT7 734 aa11.66□□□□□ -0.54
TTC28-201ENST00000397906 SHOC2Q9UQ13 582 aa11.66□□□□□ -0.54
TTC28-201ENST00000397906 MRPS23Q9Y3D9 190 aaKnown RBP11.66□□□□□ -0.54
TTC28-201ENST00000397906 NFASCO94856 1347 aa11.66□□□□□ -0.54
TTC28-201ENST00000397906 TRAV19A0A0A6YYK7 116 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 TRPC5OSA6NMA1 111 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 OAZ1P54368 228 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 HNRNPH2P55795 449 aaKnown RBP11.65□□□□□ -0.54
TTC28-201ENST00000397906 INHBEP58166 350 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 DSG4Q86SJ6 1040 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 ADCK1Q86TW2 530 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 TRAPPC5Q8IUR0 188 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 PLD3Q8IV08 490 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 KIAA0319LQ8IZA0 1049 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 SAMD3Q8N6K7 520 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 ZNF682O95780 498 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 WSCD1Q658N2 575 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 RBBP8Q99708 897 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 NLNQ9BYT8 704 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 KRT84Q9NSB2 600 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 ZMYM5Q9UJ78 669 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 CD52P31358 61 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 SDHAF4Q5VUM1 108 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 HTATIP2Q9BUP3 242 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 ILKAPQ9H0C8 392 aaPredicted RBP11.65□□□□□ -0.54
TTC28-201ENST00000397906 LRRC40Q9H9A6 602 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 MROH7Q68CQ1 1323 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 TMEM88BA6NKF7 163 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 ALKBH2Q6NS38 261 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 KAZALD1Q96I82 304 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 ACTR8Q9H981 624 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 CYP3A43Q9HB55 503 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 AASDHPPTQ9NRN7 309 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.65□□□□□ -0.54
TTC28-201ENST00000397906 GJB6O95452 261 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 ARID3BQ8IVW6 561 aaPredicted RBP11.65□□□□□ -0.54
TTC28-201ENST00000397906 PHF21BQ96EK2 531 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 ZNHIT2Q9UHR6 403 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 N6AMT1Q9Y5N5 214 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 GJB1P08034 283 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 IL17RAQ96F46 866 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 NRCAMQ92823 1304 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 BAIAP3O94812 1187 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 AXLP30530 894 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 NOGQ13253 232 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 CATSPERGQ6ZRH7 1159 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 NAT16Q8N8M0 369 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 APBA2Q99767 749 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 ASAH2Q9NR71 780 aa11.65□□□□□ -0.54
TTC28-201ENST00000397906 NFKBIL1Q9UBC1 381 aaPredicted RBP11.65□□□□□ -0.54
TTC28-201ENST00000397906 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.65□□□□□ -0.54
TTC28-201ENST00000397906 CYP2A6P11509 494 aaPredicted RBP11.65□□□□□ -0.55
TTC28-201ENST00000397906 CLK2P49760 499 aaKnown RBP11.65□□□□□ -0.55
TTC28-201ENST00000397906 BBS7Q8IWZ6 715 aa11.65□□□□□ -0.55
TTC28-201ENST00000397906 SYN2Q92777 582 aaPredicted RBP11.65□□□□□ -0.55
TTC28-201ENST00000397906 ERGIC2Q96RQ1 377 aa11.65□□□□□ -0.55
TTC28-201ENST00000397906 WDR41Q9HAD4 459 aa11.65□□□□□ -0.55
TTC28-201ENST00000397906 GPSM3Q9Y4H4 160 aa11.65□□□□□ -0.55
TTC28-201ENST00000397906 SALL1Q9NSC2 1324 aa11.65□□□□□ -0.55
TTC28-201ENST00000397906 AGLP35573 1532 aa11.65□□□□□ -0.55
TTC28-201ENST00000397906 ATP5BP06576 529 aaKnown RBP11.65□□□□□ -0.55
TTC28-201ENST00000397906 CYP2A7P20853 494 aa11.65□□□□□ -0.55
TTC28-201ENST00000397906 YWHAZP63104 245 aaKnown RBP11.65□□□□□ -0.55
TTC28-201ENST00000397906 ZBTB17Q13105 803 aa11.65□□□□□ -0.55
TTC28-201ENST00000397906 PKN1Q16512 942 aa11.65□□□□□ -0.55
TTC28-201ENST00000397906 CYP20A1Q6UW02 462 aa11.65□□□□□ -0.55
TTC28-201ENST00000397906 CENPLQ8N0S6 344 aaPredicted RBP11.65□□□□□ -0.55
TTC28-201ENST00000397906 ZNF518BQ9C0D4 1074 aa11.65□□□□□ -0.55
TTC28-201ENST00000397906 USP15Q9Y4E8 981 aaPredicted RBP11.65□□□□□ -0.55
TTC28-201ENST00000397906 RNF103O00237 685 aa11.64□□□□□ -0.55
TTC28-201ENST00000397906 NR5A2O00482 541 aa11.64□□□□□ -0.55
TTC28-201ENST00000397906 CALCAP01258 141 aa11.64□□□□□ -0.55
TTC28-201ENST00000397906 POU1F1P28069 291 aa11.64□□□□□ -0.55
TTC28-201ENST00000397906 RIOX2Q8IUF8 465 aa11.64□□□□□ -0.55
TTC28-201ENST00000397906 PPP1R14AQ96A00 147 aa11.64□□□□□ -0.55
TTC28-201ENST00000397906 EPN3Q9H201 632 aa11.64□□□□□ -0.55
TTC28-201ENST00000397906 TBC1D13Q9NVG8 400 aa11.64□□□□□ -0.55
TTC28-201ENST00000397906 DCDC2Q9UHG0 476 aa11.64□□□□□ -0.55
TTC28-201ENST00000397906 BMPR2Q13873 1038 aa11.64□□□□□ -0.55
TTC28-201ENST00000397906 CEP68Q76N32 757 aa11.64□□□□□ -0.55
TTC28-201ENST00000397906 KIF2BQ8N4N8 673 aa11.64□□□□□ -0.55
TTC28-201ENST00000397906 CLIP3Q96DZ5 547 aa11.64□□□□□ -0.55
TTC28-201ENST00000397906 NDEL1Q9GZM8 345 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms