RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 ZNF771Q7L3S4 317 aaPredicted RBP6.06□□□□□ -1.44
PTPRD-206ENST00000397617 CPA5Q8WXQ8 436 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 CCDC126Q96EE4 140 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 TRMT2BQ96GJ1 504 aaKnown RBP6.06□□□□□ -1.44
PTPRD-206ENST00000397617 MAGEB18Q96M61 343 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 UBE2OQ9C0C9 1292 aaKnown RBP6.06□□□□□ -1.44
PTPRD-206ENST00000397617 USP29Q9HBJ7 922 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 NGRNQ9NPE2 291 aaKnown RBP6.06□□□□□ -1.44
PTPRD-206ENST00000397617 ARHGEF4Q9NR80 690 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 OSER1Q9NX31 292 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 IRAK2O43187 625 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 ZDHHC11BP0C7U3 371 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 CCNCP24863 283 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 TAS2R40P59535 323 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 EIF3EP60228 445 aaKnown RBP6.06□□□□□ -1.44
PTPRD-206ENST00000397617 MRPL58Q14197 206 aaKnown RBP6.06□□□□□ -1.44
PTPRD-206ENST00000397617 MANEALQ5VSG8 457 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 PMF1Q6P1K2 205 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 MARK2Q7KZI7 788 aaKnown RBP6.06□□□□□ -1.44
PTPRD-206ENST00000397617 TTC30AQ86WT1 665 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 SRRM1Q8IYB3 904 aaKnown RBP6.06□□□□□ -1.44
PTPRD-206ENST00000397617 MICALL1Q8N3F8 863 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 GOLPH3Q9H4A6 298 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.06□□□□□ -1.44
PTPRD-206ENST00000397617 CTNNAL1Q9UBT7 734 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 NOD1Q9Y239 953 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 ARL2BPQ9Y2Y0 163 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 USH1CQ9Y6N9 552 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 TRIOBPQ9H2D6 2365 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 NLRC5Q86WI3 1866 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 EIF3FO00303 357 aaPredicted RBP6.06□□□□□ -1.44
PTPRD-206ENST00000397617 BRD2P25440 801 aaKnown RBP6.06□□□□□ -1.44
PTPRD-206ENST00000397617 WNT7BP56706 349 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 ZBTB41Q5SVQ8 909 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 LRRC8BQ6P9F7 803 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 OR6B3Q8NGW1 331 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 PCDH19Q8TAB3 1148 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 C7orf26Q96N11 449 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 CSPG4P5Q96PW8 444 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 PKMYT1Q99640 499 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 CDH19Q9H159 772 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 ST3GAL5Q9UNP4 418 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 SIN3BO75182 1162 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 ATP2C2O75185 946 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 IL4RP24394 825 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 CCNFP41002 786 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 CRHR2Q13324 411 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 SLC8B1Q6J4K2 584 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 SRLQ86TD4 932 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 ARHGAP24Q8N264 748 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 RNF139Q8WU17 664 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 PDCD6IPQ8WUM4 868 aaKnown RBP6.06□□□□□ -1.44
PTPRD-206ENST00000397617 UBLCP1Q8WVY7 318 aaPredicted RBP6.06□□□□□ -1.44
PTPRD-206ENST00000397617 HTR3CQ8WXA8 447 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 MS4A14Q96JA4 679 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 ZMAT2Q96NC0 199 aaKnown RBP6.06□□□□□ -1.44
PTPRD-206ENST00000397617 SMYD3Q9H7B4 428 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 LRRC40Q9H9A6 602 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 WDR6Q9NNW5 1121 aaKnown RBP6.06□□□□□ -1.44
PTPRD-206ENST00000397617 HMX1Q9NP08 348 aaPredicted RBP6.06□□□□□ -1.44
PTPRD-206ENST00000397617 CHST7Q9NS84 486 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 MOCS1Q9NZB8 636 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 CDY2AQ9Y6F7 541 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 C2CD2LO14523 706 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 PECAM1P16284 738 aaPredicted RBP6.06□□□□□ -1.44
PTPRD-206ENST00000397617 CCR1P32246 355 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 NDST2P52849 883 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 OVOS1Q6IE37 1185 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 ANKS3Q6ZW76 656 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 EEPD1Q7L9B9 569 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 FAM172AQ8WUF8 416 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 FCRL5Q96RD9 977 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 SMC6Q96SB8 1091 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 PSMB7Q99436 277 aa6.06□□□□□ -1.44
PTPRD-206ENST00000397617 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.06□□□□□ -1.44
PTPRD-206ENST00000397617 IGLV3-10A0A075B6K4 115 aa6.05□□□□□ -1.44
PTPRD-206ENST00000397617 CBX1P83916 185 aa6.05□□□□□ -1.44
PTPRD-206ENST00000397617 PTPN21Q16825 1174 aa6.05□□□□□ -1.44
PTPRD-206ENST00000397617 OR6B2Q6IFH4 312 aa6.05□□□□□ -1.44
PTPRD-206ENST00000397617 TTC23LQ6PF05 361 aa6.05□□□□□ -1.44
PTPRD-206ENST00000397617 GSTA5Q7RTV2 222 aa6.05□□□□□ -1.44
PTPRD-206ENST00000397617 SMG8Q8ND04 991 aaKnown RBP6.05□□□□□ -1.44
PTPRD-206ENST00000397617 CPT1BQ92523 772 aa6.05□□□□□ -1.44
PTPRD-206ENST00000397617 INPP5DQ92835 1189 aa6.05□□□□□ -1.44
PTPRD-206ENST00000397617 ADAM7Q9H2U9 754 aa6.05□□□□□ -1.44
PTPRD-206ENST00000397617 SCML2Q9UQR0 700 aa6.05□□□□□ -1.44
PTPRD-206ENST00000397617 SELPP16109 830 aa6.05□□□□□ -1.44
PTPRD-206ENST00000397617 COPAP53621 1224 aa6.05□□□□□ -1.44
PTPRD-206ENST00000397617 NSUN2Q08J23 767 aaKnown RBP eCLIP6.05□□□□□ -1.44
PTPRD-206ENST00000397617 KRT81Q14533 505 aa6.05□□□□□ -1.44
PTPRD-206ENST00000397617 PTPROQ16827 1216 aa6.05□□□□□ -1.44
PTPRD-206ENST00000397617 UPP1Q16831 310 aa6.05□□□□□ -1.44
PTPRD-206ENST00000397617 PABPC1LQ4VXU2 614 aaKnown RBP6.05□□□□□ -1.44
PTPRD-206ENST00000397617 CYP4V2Q6ZWL3 525 aaPredicted RBP6.05□□□□□ -1.44
PTPRD-206ENST00000397617 SETD3Q86TU7 594 aaPredicted RBP6.05□□□□□ -1.44
PTPRD-206ENST00000397617 PHC3Q8NDX5 983 aa6.05□□□□□ -1.44
PTPRD-206ENST00000397617 COPS5Q92905 334 aa6.05□□□□□ -1.44
PTPRD-206ENST00000397617 IL12RB2Q99665 862 aa6.05□□□□□ -1.44
PTPRD-206ENST00000397617 KLHL14Q9P2G3 628 aa6.05□□□□□ -1.44
PTPRD-206ENST00000397617 HAO1Q9UJM8 370 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 205.6 ms