RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 FOXC1Q12948 553 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 CAMK1Q14012 370 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 RCN2Q14257 317 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 MEP1BQ16820 701 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 SLC39A12Q504Y0 691 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 USP39Q53GS9 565 aaKnown RBP7.11□□□□□ -1.27
SMCO1-201ENST00000397537 NHSL2Q5HYW2 709 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 C9orf152Q5JTZ5 239 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 FAM182BQ5T319 152 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 KIAA1841Q6NSI8 718 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 SLC25A24Q6NUK1 477 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 LETMD1Q6P1Q0 360 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 FAM160B2Q86V87 743 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 SPATA2LQ8IUW3 424 aaPredicted RBP7.11□□□□□ -1.27
SMCO1-201ENST00000397537 CCDC28AQ8IWP9 274 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 PCSK9Q8NBP7 692 aaKnown RBP7.11□□□□□ -1.27
SMCO1-201ENST00000397537 RSC1A1Q92681 617 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 TCTN2Q96GX1 697 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 PKP4Q99569 1192 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 CARD11Q9BXL7 1154 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 RXFP1Q9HBX9 757 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 MARCH4Q9P2E8 410 aaPredicted RBP7.11□□□□□ -1.27
SMCO1-201ENST00000397537 ADGRB2O60241 1585 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 TRPM2O94759 1503 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 ADAMTS13Q76LX8 1427 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 MTUS2Q5JR59 1369 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 FAM90A18PA6NE21 464 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 FAM90A16PA6NEW6 464 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 LRRC72A6NJI9 287 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 FAM90A9PA6NNJ1 464 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 FAM90A5PA8MXJ8 464 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 TULP2O00295 520 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 DYNC1I1O14576 645 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 TM4SF5O14894 197 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 E2F6O75461 281 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 LRIG2O94898 1065 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 PCDH8O95206 1070 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 GLP2RO95838 553 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 SPARCP09486 303 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 FAM90A15PP0C7V4 464 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 FAM90A14PP0C7W9 464 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 CD9P21926 228 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 IL1R2P27930 398 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 NOS3P29474 1203 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 PRDX5P30044 214 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 MCM7P33993 719 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 ARCN1P48444 511 aaKnown RBP7.11□□□□□ -1.27
SMCO1-201ENST00000397537 RBM5P52756 815 aaKnown RBP eCLIP7.11□□□□□ -1.27
SMCO1-201ENST00000397537 ALDH18A1P54886 795 aaKnown RBP7.11□□□□□ -1.27
SMCO1-201ENST00000397537 TLE1Q04724 770 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 RALGDSQ12967 914 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 ATXN7L2Q5T6C5 722 aaPredicted RBP7.11□□□□□ -1.27
SMCO1-201ENST00000397537 KRT80Q6KB66 452 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 TMEM154Q6P9G4 183 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 GBP6Q6ZN66 633 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 KANSL1Q7Z3B3 1105 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 TMEM200AQ86VY9 491 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 ADGRF2Q8IZF7 708 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 SYCP3Q8IZU3 236 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 FBXW8Q8N3Y1 598 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.11□□□□□ -1.27
SMCO1-201ENST00000397537 PIP4K2CQ8TBX8 421 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 C17orf50Q8WW18 174 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 MRPS27Q92552 414 aaKnown RBP7.11□□□□□ -1.27
SMCO1-201ENST00000397537 FAM81BQ96LP2 452 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 TEX13AQ9BXU3 409 aaPredicted RBP7.11□□□□□ -1.27
SMCO1-201ENST00000397537 TTYH1Q9H313 450 aaPredicted RBP7.11□□□□□ -1.27
SMCO1-201ENST00000397537 WDCPQ9H6R7 721 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 SERINC1Q9NRX5 453 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 RBM12Q9NTZ6 932 aaKnown RBP7.11□□□□□ -1.27
SMCO1-201ENST00000397537 NMRK1Q9NWW6 199 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 MID2Q9UJV3 735 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 APPL1Q9UKG1 709 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 DSEQ9UL01 958 aa7.11□□□□□ -1.27
SMCO1-201ENST00000397537 MYOM1P52179 1685 aa7.1□□□□□ -1.27
SMCO1-201ENST00000397537 PTPRUQ92729 1446 aa7.1□□□□□ -1.27
SMCO1-201ENST00000397537 COL15A1P39059 1388 aa7.1□□□□□ -1.27
SMCO1-201ENST00000397537 FAM90A27PA6NNH2 459 aa7.1□□□□□ -1.27
SMCO1-201ENST00000397537 GPR89AB7ZAQ6 455 aa7.1□□□□□ -1.27
SMCO1-201ENST00000397537 FOXP2O15409 715 aa7.1□□□□□ -1.27
SMCO1-201ENST00000397537 VEGFDO43915 354 aa7.1□□□□□ -1.27
SMCO1-201ENST00000397537 BUB1BO60566 1050 aaPredicted RBP7.1□□□□□ -1.27
SMCO1-201ENST00000397537 DDHD2O94830 711 aa7.1□□□□□ -1.27
SMCO1-201ENST00000397537 NTSR2O95665 410 aa7.1□□□□□ -1.27
SMCO1-201ENST00000397537 C4BPAP04003 597 aaKnown RBP7.1□□□□□ -1.27
SMCO1-201ENST00000397537 CYP21A2P08686 494 aa7.1□□□□□ -1.27
SMCO1-201ENST00000397537 GPR89BP0CG08 455 aa7.1□□□□□ -1.27
SMCO1-201ENST00000397537 CAPN2P17655 700 aa7.1□□□□□ -1.27
SMCO1-201ENST00000397537 BSGP35613 385 aa7.1□□□□□ -1.27
SMCO1-201ENST00000397537 KCNJ4P48050 445 aa7.1□□□□□ -1.27
SMCO1-201ENST00000397537 SLC6A9P48067 706 aa7.1□□□□□ -1.27
SMCO1-201ENST00000397537 ATXN3P54252 364 aaPredicted RBP7.1□□□□□ -1.27
SMCO1-201ENST00000397537 ZNF200P98182 395 aaPredicted RBP7.1□□□□□ -1.27
SMCO1-201ENST00000397537 TRIM28Q13263 835 aaKnown RBP7.1□□□□□ -1.27
SMCO1-201ENST00000397537 NRN1LQ496H8 165 aa7.1□□□□□ -1.27
SMCO1-201ENST00000397537 CCDC40Q4G0X9 1142 aa7.1□□□□□ -1.27
SMCO1-201ENST00000397537 HSP90AA5PQ58FG0 334 aa7.1□□□□□ -1.27
SMCO1-201ENST00000397537 RNFT1Q5M7Z0 435 aa7.1□□□□□ -1.27
SMCO1-201ENST00000397537 C12orf60Q5U649 245 aa7.1□□□□□ -1.27
SMCO1-201ENST00000397537 ZYG11AQ6WRX3 759 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms