RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 TBX4P57082 545 aa22■■□□□ 1.11
CPNE1-204ENST00000397443 CKAP4Q07065 602 aaKnown RBP22■■□□□ 1.11
CPNE1-204ENST00000397443 C2orf54Q08AI8 447 aa22■■□□□ 1.11
CPNE1-204ENST00000397443 TXNDC8Q6A555 127 aa22■■□□□ 1.11
CPNE1-204ENST00000397443 TTC16Q8NEE8 873 aa22■■□□□ 1.11
CPNE1-204ENST00000397443 CMASQ8NFW8 434 aaPredicted RBP22■■□□□ 1.11
CPNE1-204ENST00000397443 VN1R2Q8NFZ6 395 aa22■■□□□ 1.11
CPNE1-204ENST00000397443 TEKT4Q8WW24 435 aa22■■□□□ 1.11
CPNE1-204ENST00000397443 KCTD15Q96SI1 283 aaPredicted RBP22■■□□□ 1.11
CPNE1-204ENST00000397443 CYP2S1Q96SQ9 504 aa22■■□□□ 1.11
CPNE1-204ENST00000397443 LRRC3Q9BY71 257 aa22■■□□□ 1.11
CPNE1-204ENST00000397443 OSBPL8Q9BZF1 889 aa22■■□□□ 1.11
CPNE1-204ENST00000397443 SNX10Q9Y5X0 201 aa22■■□□□ 1.11
CPNE1-204ENST00000397443 ANAPC1Q9H1A4 1944 aa22■■□□□ 1.11
CPNE1-204ENST00000397443 C3orf70A6NLC5 250 aaPredicted RBP22■■□□□ 1.11
CPNE1-204ENST00000397443 ADRA1BP35368 520 aa22■■□□□ 1.11
CPNE1-204ENST00000397443 ARL13BQ3SXY8 428 aa22■■□□□ 1.11
CPNE1-204ENST00000397443 PABPC1LQ4VXU2 614 aaKnown RBP22■■□□□ 1.11
CPNE1-204ENST00000397443 EFHC2Q5JST6 749 aa22■■□□□ 1.11
CPNE1-204ENST00000397443 RNF38Q9H0F5 515 aa22■■□□□ 1.11
CPNE1-204ENST00000397443 DNMT3BQ9UBC3 853 aaKnown RBP22■■□□□ 1.11
CPNE1-204ENST00000397443 DNMT3LQ9UJW3 386 aa22■■□□□ 1.11
CPNE1-204ENST00000397443 CCR1P32246 355 aa21.99■■□□□ 1.11
CPNE1-204ENST00000397443 CETN2P41208 172 aa21.99■■□□□ 1.11
CPNE1-204ENST00000397443 CDKN2BP42772 138 aa21.99■■□□□ 1.11
CPNE1-204ENST00000397443 DYNLT1P63172 113 aa21.99■■□□□ 1.11
CPNE1-204ENST00000397443 NTHL1P78549 312 aa21.99■■□□□ 1.11
CPNE1-204ENST00000397443 ADCY2Q08462 1091 aa21.99■■□□□ 1.11
CPNE1-204ENST00000397443 DPYSL3Q14195 570 aa21.99■■□□□ 1.11
CPNE1-204ENST00000397443 SNX30Q5VWJ9 437 aa21.99■■□□□ 1.11
CPNE1-204ENST00000397443 TMC5Q6UXY8 1006 aa21.99■■□□□ 1.11
CPNE1-204ENST00000397443 SLC13A5Q86YT5 568 aaPredicted RBP21.99■■□□□ 1.11
CPNE1-204ENST00000397443 CEP112Q8N8E3 955 aa21.99■■□□□ 1.11
CPNE1-204ENST00000397443 APOL5Q9BWW9 433 aa21.99■■□□□ 1.11
CPNE1-204ENST00000397443 SIK2Q9H0K1 926 aa21.99■■□□□ 1.11
CPNE1-204ENST00000397443 PCDH18Q9HCL0 1135 aa21.99■■□□□ 1.11
CPNE1-204ENST00000397443 DPP7Q9UHL4 492 aa21.99■■□□□ 1.11
CPNE1-204ENST00000397443 TLR6Q9Y2C9 796 aa21.99■■□□□ 1.11
CPNE1-204ENST00000397443 CTAGE15A4D2H0 777 aa21.98■■□□□ 1.11
CPNE1-204ENST00000397443 KRIT1O00522 736 aa21.98■■□□□ 1.11
CPNE1-204ENST00000397443 CREB3O43889 395 aa21.98■■□□□ 1.11
CPNE1-204ENST00000397443 XYLBO75191 536 aa21.98■■□□□ 1.11
CPNE1-204ENST00000397443 SLU7O95391 586 aaKnown RBP21.98■■□□□ 1.11
CPNE1-204ENST00000397443 CTAGE8P0CG41 777 aa21.98■■□□□ 1.11
CPNE1-204ENST00000397443 L1CAMP32004 1257 aa21.98■■□□□ 1.11
CPNE1-204ENST00000397443 CCR2P41597 374 aa21.98■■□□□ 1.11
CPNE1-204ENST00000397443 PPP3CCP48454 512 aa21.98■■□□□ 1.11
CPNE1-204ENST00000397443 EIF4EBP2Q13542 120 aaPredicted RBP21.98■■□□□ 1.11
CPNE1-204ENST00000397443 TFDP3Q5H9I0 405 aa21.98■■□□□ 1.11
CPNE1-204ENST00000397443 TCEAL5Q5H9L2 206 aa21.98■■□□□ 1.11
CPNE1-204ENST00000397443 STXBP5Q5T5C0 1151 aa21.98■■□□□ 1.11
CPNE1-204ENST00000397443 GRASPQ7Z6J2 395 aaPredicted RBP21.98■■□□□ 1.11
CPNE1-204ENST00000397443 CTAGE6Q86UF2 777 aa21.98■■□□□ 1.11
CPNE1-204ENST00000397443 CTAGE4Q8IX94 777 aa21.98■■□□□ 1.11
CPNE1-204ENST00000397443 MRPS31Q92665 395 aaKnown RBP21.98■■□□□ 1.11
CPNE1-204ENST00000397443 PPP2R3CQ969Q6 453 aa21.98■■□□□ 1.11
CPNE1-204ENST00000397443 TCEAL4Q96EI5 215 aa21.98■■□□□ 1.11
CPNE1-204ENST00000397443 GCNAQ96QF7 691 aa21.98■■□□□ 1.11
CPNE1-204ENST00000397443 SLC22A12Q96S37 553 aa21.98■■□□□ 1.11
CPNE1-204ENST00000397443 CDK5RAP1Q96SZ6 601 aaKnown RBP21.98■■□□□ 1.11
CPNE1-204ENST00000397443 SMPD4Q9NXE4 827 aa21.98■■□□□ 1.11
CPNE1-204ENST00000397443 RNF14Q9UBS8 474 aa21.98■■□□□ 1.11
CPNE1-204ENST00000397443 XPO7Q9UIA9 1087 aaKnown RBP21.98■■□□□ 1.11
CPNE1-204ENST00000397443 NR2E1Q9Y466 385 aa21.98■■□□□ 1.11
CPNE1-204ENST00000397443 hCG_1818297A0A087WSY0 165 aa21.98■■□□□ 1.11
CPNE1-204ENST00000397443 HNRNPA1P09651 372 aaKnown RBP eCLIP21.98■■□□□ 1.11
CPNE1-204ENST00000397443 PTPN2P17706 415 aa21.98■■□□□ 1.11
CPNE1-204ENST00000397443 LRIT3Q3SXY7 679 aa21.98■■□□□ 1.11
CPNE1-204ENST00000397443 ELMSAN1Q6PJG2 1045 aa21.98■■□□□ 1.11
CPNE1-204ENST00000397443 PDZD4Q76G19 769 aaPredicted RBP21.98■■□□□ 1.11
CPNE1-204ENST00000397443 TADA2BQ86TJ2 420 aa21.98■■□□□ 1.11
CPNE1-204ENST00000397443 RFX6Q8HWS3 928 aa21.98■■□□□ 1.11
CPNE1-204ENST00000397443 MAP7D3Q8IWC1 876 aa21.98■■□□□ 1.11
CPNE1-204ENST00000397443 ARL14EPQ8N8R7 260 aaPredicted RBP21.98■■□□□ 1.11
CPNE1-204ENST00000397443 MAB21L3Q8N8X9 362 aa21.98■■□□□ 1.11
CPNE1-204ENST00000397443 PIDD1Q9HB75 910 aa21.98■■□□□ 1.11
CPNE1-204ENST00000397443 RBM12Q9NTZ6 932 aaKnown RBP21.98■■□□□ 1.11
CPNE1-204ENST00000397443 MTMR10Q9NXD2 777 aa21.98■■□□□ 1.11
CPNE1-204ENST00000397443 OBSL1O75147 1896 aa21.97■■□□□ 1.11
CPNE1-204ENST00000397443 FAM72CH0Y354 149 aa21.97■■□□□ 1.11
CPNE1-204ENST00000397443 LINC01565O15544 149 aa21.97■■□□□ 1.11
CPNE1-204ENST00000397443 OAS1P00973 400 aaKnown RBP21.97■■□□□ 1.11
CPNE1-204ENST00000397443 RHOP08100 348 aa21.97■■□□□ 1.11
CPNE1-204ENST00000397443 IRF1P10914 325 aa21.97■■□□□ 1.11
CPNE1-204ENST00000397443 ARSEP51690 589 aa21.97■■□□□ 1.11
CPNE1-204ENST00000397443 KCNQ1P51787 676 aa21.97■■□□□ 1.11
CPNE1-204ENST00000397443 TRIP4Q15650 581 aaPredicted RBP21.97■■□□□ 1.11
CPNE1-204ENST00000397443 FAM72AQ5TYM5 149 aa21.97■■□□□ 1.11
CPNE1-204ENST00000397443 FAM72DQ6L9T8 149 aa21.97■■□□□ 1.11
CPNE1-204ENST00000397443 FAM72BQ86X60 149 aa21.97■■□□□ 1.11
CPNE1-204ENST00000397443 SPATA4Q8NEY3 305 aa21.97■■□□□ 1.11
CPNE1-204ENST00000397443 NTAN1Q96AB6 310 aa21.97■■□□□ 1.11
CPNE1-204ENST00000397443 HAUS1Q96CS2 278 aa21.97■■□□□ 1.11
CPNE1-204ENST00000397443 FCRL2Q96LA5 508 aaPredicted RBP21.97■■□□□ 1.11
CPNE1-204ENST00000397443 FAM161BQ96MY7 647 aa21.97■■□□□ 1.11
CPNE1-204ENST00000397443 FAM118BQ9BPY3 351 aa21.97■■□□□ 1.11
CPNE1-204ENST00000397443 PRKD2Q9BZL6 878 aa21.97■■□□□ 1.11
CPNE1-204ENST00000397443 TTYH1Q9H313 450 aaPredicted RBP21.97■■□□□ 1.11
CPNE1-204ENST00000397443 NSUN3Q9H649 340 aaKnown RBP21.97■■□□□ 1.11
CPNE1-204ENST00000397443 GKN1Q9NS71 199 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms