RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 COPS2P61201 443 aa24.48■■□□□ 1.51
TSPAN4-202ENST00000397396 AMPD2Q01433 879 aa24.48■■□□□ 1.51
TSPAN4-202ENST00000397396 ITIH3Q06033 890 aa24.48■■□□□ 1.51
TSPAN4-202ENST00000397396 PDK2Q15119 407 aa24.48■■□□□ 1.51
TSPAN4-202ENST00000397396 TMC5Q6UXY8 1006 aa24.48■■□□□ 1.51
TSPAN4-202ENST00000397396 GRASPQ7Z6J2 395 aaPredicted RBP24.48■■□□□ 1.51
TSPAN4-202ENST00000397396 GPR149Q86SP6 731 aa24.48■■□□□ 1.51
TSPAN4-202ENST00000397396 MIB1Q86YT6 1006 aa24.48■■□□□ 1.51
TSPAN4-202ENST00000397396 UNC45BQ8IWX7 931 aa24.48■■□□□ 1.51
TSPAN4-202ENST00000397396 RCOR2Q8IZ40 523 aa24.48■■□□□ 1.51
TSPAN4-202ENST00000397396 SNRNP25Q9BV90 132 aaKnown RBP24.48■■□□□ 1.51
TSPAN4-202ENST00000397396 ARHGEF38Q9NXL2 777 aa24.48■■□□□ 1.51
TSPAN4-202ENST00000397396 CALCOCO1Q9P1Z2 691 aa24.48■■□□□ 1.51
TSPAN4-202ENST00000397396 AP4E1Q9UPM8 1137 aa24.48■■□□□ 1.51
TSPAN4-202ENST00000397396 MSI1O43347 362 aaKnown RBP24.47■■□□□ 1.51
TSPAN4-202ENST00000397396 MBL2P11226 248 aaPredicted RBP24.47■■□□□ 1.51
TSPAN4-202ENST00000397396 TCF4P15884 667 aa24.47■■□□□ 1.51
TSPAN4-202ENST00000397396 RBM10P98175 930 aaKnown RBP24.47■■□□□ 1.51
TSPAN4-202ENST00000397396 CYP4F8P98187 520 aa24.47■■□□□ 1.51
TSPAN4-202ENST00000397396 PRSS36Q5K4E3 855 aa24.47■■□□□ 1.51
TSPAN4-202ENST00000397396 RARS2Q5T160 578 aaKnown RBP24.47■■□□□ 1.51
TSPAN4-202ENST00000397396 ATP6V0D2Q8N8Y2 350 aa24.47■■□□□ 1.51
TSPAN4-202ENST00000397396 SHKBP1Q8TBC3 707 aa24.47■■□□□ 1.51
TSPAN4-202ENST00000397396 ALG3Q92685 438 aa24.47■■□□□ 1.51
TSPAN4-202ENST00000397396 SLC39A13Q96H72 371 aa24.47■■□□□ 1.51
TSPAN4-202ENST00000397396 PEBP4Q96S96 227 aa24.47■■□□□ 1.51
TSPAN4-202ENST00000397396 TASP1Q9H6P5 420 aa24.47■■□□□ 1.51
TSPAN4-202ENST00000397396 STAU2Q9NUL3 570 aaKnown RBP eCLIP24.47■■□□□ 1.51
TSPAN4-202ENST00000397396 FZD10Q9ULW2 581 aa24.47■■□□□ 1.51
TSPAN4-202ENST00000397396 MYO9BQ13459 2157 aa24.47■■□□□ 1.51
TSPAN4-202ENST00000397396 CHD7Q9P2D1 2997 aa24.46■■□□□ 1.51
TSPAN4-202ENST00000397396 C2orf78A6NCI8 922 aa24.46■■□□□ 1.51
TSPAN4-202ENST00000397396 TBX18O95935 607 aa24.46■■□□□ 1.51
TSPAN4-202ENST00000397396 IGLV3-27P01718 113 aa24.46■■□□□ 1.51
TSPAN4-202ENST00000397396 HDCP19113 662 aa24.46■■□□□ 1.51
TSPAN4-202ENST00000397396 ADRA1BP35368 520 aa24.46■■□□□ 1.51
TSPAN4-202ENST00000397396 MARCKSL1P49006 195 aa24.46■■□□□ 1.51
TSPAN4-202ENST00000397396 ATXN1P54253 815 aaKnown RBP24.46■■□□□ 1.51
TSPAN4-202ENST00000397396 ADGRE1Q14246 886 aa24.46■■□□□ 1.51
TSPAN4-202ENST00000397396 KRT81Q14533 505 aa24.46■■□□□ 1.51
TSPAN4-202ENST00000397396 DPYSL2Q16555 572 aa24.46■■□□□ 1.51
TSPAN4-202ENST00000397396 SMTNL2Q2TAL5 461 aa24.46■■□□□ 1.51
TSPAN4-202ENST00000397396 CES5AQ6NT32 575 aa24.46■■□□□ 1.51
TSPAN4-202ENST00000397396 CYP4V2Q6ZWL3 525 aaPredicted RBP24.46■■□□□ 1.51
TSPAN4-202ENST00000397396 DDX42Q86XP3 938 aaKnown RBP eCLIP24.46■■□□□ 1.51
TSPAN4-202ENST00000397396 KCTD6Q8NC69 237 aa24.46■■□□□ 1.51
TSPAN4-202ENST00000397396 HSPH1Q92598 858 aa24.46■■□□□ 1.51
TSPAN4-202ENST00000397396 LRCH3Q96II8 777 aa24.46■■□□□ 1.51
TSPAN4-202ENST00000397396 HAPLN3Q96S86 360 aa24.46■■□□□ 1.51
TSPAN4-202ENST00000397396 NAP1L3Q99457 506 aaPredicted RBP24.46■■□□□ 1.51
TSPAN4-202ENST00000397396 TKTL2Q9H0I9 626 aa24.46■■□□□ 1.51
TSPAN4-202ENST00000397396 RCOR3Q9P2K3 495 aaPredicted RBP24.46■■□□□ 1.51
TSPAN4-202ENST00000397396 MRPS23Q9Y3D9 190 aaKnown RBP24.46■■□□□ 1.51
TSPAN4-202ENST00000397396 LAMA2P24043 3122 aaKnown RBP24.46■■□□□ 1.51
TSPAN4-202ENST00000397396 OBSL1O75147 1896 aa24.45■■□□□ 1.51
TSPAN4-202ENST00000397396 LRRD1A4D1F6 860 aa24.45■■□□□ 1.5
TSPAN4-202ENST00000397396 ZNF487B1APH4 448 aa24.45■■□□□ 1.5
TSPAN4-202ENST00000397396 CKMP06732 381 aa24.45■■□□□ 1.5
TSPAN4-202ENST00000397396 HARS2P49590 506 aaKnown RBP24.45■■□□□ 1.5
TSPAN4-202ENST00000397396 SLC7A9P82251 487 aa24.45■■□□□ 1.5
TSPAN4-202ENST00000397396 COL19A1Q14993 1142 aa24.45■■□□□ 1.5
TSPAN4-202ENST00000397396 CTC1Q2NKJ3 1217 aa24.45■■□□□ 1.5
TSPAN4-202ENST00000397396 ZC3H12AQ5D1E8 599 aaKnown RBP24.45■■□□□ 1.5
TSPAN4-202ENST00000397396 KCNT1Q5JUK3 1230 aa24.45■■□□□ 1.5
TSPAN4-202ENST00000397396 GPR158Q5T848 1215 aa24.45■■□□□ 1.5
TSPAN4-202ENST00000397396 TXNDC8Q6A555 127 aa24.45■■□□□ 1.5
TSPAN4-202ENST00000397396 CCDC50Q8IVM0 306 aa24.45■■□□□ 1.5
TSPAN4-202ENST00000397396 CCDC185Q8N715 623 aa24.45■■□□□ 1.5
TSPAN4-202ENST00000397396 C12orf76Q8N812 135 aaPredicted RBP24.45■■□□□ 1.5
TSPAN4-202ENST00000397396 PABPC5Q96DU9 382 aaKnown RBP24.45■■□□□ 1.5
TSPAN4-202ENST00000397396 BTN2A3PQ96KV6 586 aa24.45■■□□□ 1.5
TSPAN4-202ENST00000397396 FCRL2Q96LA5 508 aaPredicted RBP24.45■■□□□ 1.5
TSPAN4-202ENST00000397396 PSMB7Q99436 277 aa24.45■■□□□ 1.5
TSPAN4-202ENST00000397396 DCLK3Q9C098 648 aa24.45■■□□□ 1.5
TSPAN4-202ENST00000397396 CDC23Q9UJX2 597 aa24.45■■□□□ 1.5
TSPAN4-202ENST00000397396 LINC01565O15544 149 aa24.44■■□□□ 1.5
TSPAN4-202ENST00000397396 HTR7P34969 479 aa24.44■■□□□ 1.5
TSPAN4-202ENST00000397396 PTPN7P35236 360 aa24.44■■□□□ 1.5
TSPAN4-202ENST00000397396 AVPR1AP37288 418 aa24.44■■□□□ 1.5
TSPAN4-202ENST00000397396 CCR2P41597 374 aa24.44■■□□□ 1.5
TSPAN4-202ENST00000397396 CDH6P55285 790 aa24.44■■□□□ 1.5
TSPAN4-202ENST00000397396 CKAP4Q07065 602 aaKnown RBP24.44■■□□□ 1.5
TSPAN4-202ENST00000397396 PPP2R5EQ16537 467 aa24.44■■□□□ 1.5
TSPAN4-202ENST00000397396 RAB6CQ53S08 254 aa24.44■■□□□ 1.5
TSPAN4-202ENST00000397396 CCDC181Q5TID7 509 aa24.44■■□□□ 1.5
TSPAN4-202ENST00000397396 TXNRD3NBQ6F5E7 133 aa24.44■■□□□ 1.5
TSPAN4-202ENST00000397396 MAB21L3Q8N8X9 362 aa24.44■■□□□ 1.5
TSPAN4-202ENST00000397396 RIPOR3Q96MK2 946 aa24.44■■□□□ 1.5
TSPAN4-202ENST00000397396 ZNF670Q9BS34 389 aa24.44■■□□□ 1.5
TSPAN4-202ENST00000397396 RAB6CQ9H0N0 254 aa24.44■■□□□ 1.5
TSPAN4-202ENST00000397396 ADAM7Q9H2U9 754 aa24.44■■□□□ 1.5
TSPAN4-202ENST00000397396 DHX35Q9H5Z1 703 aaKnown RBP24.44■■□□□ 1.5
TSPAN4-202ENST00000397396 CLDND1Q9NY35 253 aa24.44■■□□□ 1.5
TSPAN4-202ENST00000397396 ANAPC1Q9H1A4 1944 aa24.44■■□□□ 1.5
TSPAN4-202ENST00000397396 KCNU1A8MYU2 1149 aa24.43■■□□□ 1.5
TSPAN4-202ENST00000397396 CEP104O60308 925 aa24.43■■□□□ 1.5
TSPAN4-202ENST00000397396 LATS1O95835 1130 aa24.43■■□□□ 1.5
TSPAN4-202ENST00000397396 KDELR1P24390 212 aa24.43■■□□□ 1.5
TSPAN4-202ENST00000397396 ARL4AP40617 200 aa24.43■■□□□ 1.5
TSPAN4-202ENST00000397396 PAFAH1B1P43034 410 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms