RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 TRAPPC11Q7Z392 1133 aa9.95□□□□□ -0.82
NEDD9-203ENST00000397378 TMPRSS6Q8IU80 811 aa9.95□□□□□ -0.82
NEDD9-203ENST00000397378 WDR49Q8IV35 697 aa9.95□□□□□ -0.82
NEDD9-203ENST00000397378 B3GALNT2Q8NCR0 500 aa9.95□□□□□ -0.82
NEDD9-203ENST00000397378 OR6B3Q8NGW1 331 aa9.95□□□□□ -0.82
NEDD9-203ENST00000397378 WBP2Q969T9 261 aa9.95□□□□□ -0.82
NEDD9-203ENST00000397378 SIPA1Q96FS4 1042 aa9.95□□□□□ -0.82
NEDD9-203ENST00000397378 B3GNT5Q9BYG0 378 aa9.95□□□□□ -0.82
NEDD9-203ENST00000397378 DPH1Q9BZG8 443 aa9.95□□□□□ -0.82
NEDD9-203ENST00000397378 PCIF1Q9H4Z3 704 aa9.95□□□□□ -0.82
NEDD9-203ENST00000397378 CCSER2Q9H7U1 834 aa9.95□□□□□ -0.82
NEDD9-203ENST00000397378 COMMD8Q9NX08 183 aa9.95□□□□□ -0.82
NEDD9-203ENST00000397378 WDR35Q9P2L0 1181 aa9.95□□□□□ -0.82
NEDD9-203ENST00000397378 CHORDC1Q9UHD1 332 aaPredicted RBP9.95□□□□□ -0.82
NEDD9-203ENST00000397378 PCDHB1Q9Y5F3 818 aa9.95□□□□□ -0.82
NEDD9-203ENST00000397378 STON1Q9Y6Q2 735 aa9.95□□□□□ -0.82
NEDD9-203ENST00000397378 SPTAN1Q13813 2472 aaKnown RBP9.95□□□□□ -0.82
NEDD9-203ENST00000397378 RELNP78509 3460 aa9.95□□□□□ -0.82
NEDD9-203ENST00000397378 BOD1L1Q8NFC6 3051 aa9.94□□□□□ -0.82
NEDD9-203ENST00000397378 ATP8B3O60423 1300 aa9.94□□□□□ -0.82
NEDD9-203ENST00000397378 NEDD8-MDP1E9PL57 170 aa9.94□□□□□ -0.82
NEDD9-203ENST00000397378 CLDN5O00501 218 aa9.94□□□□□ -0.82
NEDD9-203ENST00000397378 NPC1O15118 1278 aa9.94□□□□□ -0.82
NEDD9-203ENST00000397378 SUV39H1O43463 412 aa9.94□□□□□ -0.82
NEDD9-203ENST00000397378 GREM1O60565 184 aa9.94□□□□□ -0.82
NEDD9-203ENST00000397378 PRPF6O94906 941 aaKnown RBP9.94□□□□□ -0.82
NEDD9-203ENST00000397378 STAU1O95793 577 aaKnown RBP9.94□□□□□ -0.82
NEDD9-203ENST00000397378 CST3P01034 146 aaPredicted RBP9.94□□□□□ -0.82
NEDD9-203ENST00000397378 TYRP14679 529 aa9.94□□□□□ -0.82
NEDD9-203ENST00000397378 C21orf59P57076 290 aa9.94□□□□□ -0.82
NEDD9-203ENST00000397378 GABREP78334 506 aa9.94□□□□□ -0.82
NEDD9-203ENST00000397378 INSM1Q01101 510 aaPredicted RBP9.94□□□□□ -0.82
NEDD9-203ENST00000397378 ORC1Q13415 861 aa9.94□□□□□ -0.82
NEDD9-203ENST00000397378 PRAMEF14Q5SWL7 426 aa9.94□□□□□ -0.82
NEDD9-203ENST00000397378 SV2BQ7L1I2 683 aa9.94□□□□□ -0.82
NEDD9-203ENST00000397378 CBWD2Q8IUF1 395 aa9.94□□□□□ -0.82
NEDD9-203ENST00000397378 LSMEM2Q8N112 164 aa9.94□□□□□ -0.82
NEDD9-203ENST00000397378 DCBLD1Q8N8Z6 715 aa9.94□□□□□ -0.82
NEDD9-203ENST00000397378 EXD3Q8N9H8 876 aa9.94□□□□□ -0.82
NEDD9-203ENST00000397378 SCAMP5Q8TAC9 235 aa9.94□□□□□ -0.82
NEDD9-203ENST00000397378 NOC3LQ8WTT2 800 aaKnown RBP9.94□□□□□ -0.82
NEDD9-203ENST00000397378 EPSTI1Q96J88 318 aa9.94□□□□□ -0.82
NEDD9-203ENST00000397378 ARHGAP9Q9BRR9 750 aa9.94□□□□□ -0.82
NEDD9-203ENST00000397378 BBS2Q9BXC9 721 aa9.94□□□□□ -0.82
NEDD9-203ENST00000397378 FGFBP2Q9BYJ0 223 aa9.94□□□□□ -0.82
NEDD9-203ENST00000397378 DPEP3Q9H4B8 488 aa9.94□□□□□ -0.82
NEDD9-203ENST00000397378 C6orf106Q9H6K1 298 aaPredicted RBP9.94□□□□□ -0.82
NEDD9-203ENST00000397378 KIAA1586Q9HCI6 787 aa9.94□□□□□ -0.82
NEDD9-203ENST00000397378 CCDC39Q9UFE4 941 aa9.94□□□□□ -0.82
NEDD9-203ENST00000397378 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.94□□□□□ -0.82
NEDD9-203ENST00000397378 ANKRD17O75179 2603 aaKnown RBP9.93□□□□□ -0.82
NEDD9-203ENST00000397378 AHCTF1Q8WYP5 2266 aa9.93□□□□□ -0.82
NEDD9-203ENST00000397378 A8MXQ7 604 aa9.93□□□□□ -0.82
NEDD9-203ENST00000397378 SYNCRIPO60506 623 aaKnown RBP9.93□□□□□ -0.82
NEDD9-203ENST00000397378 TLR5O60602 858 aa9.93□□□□□ -0.82
NEDD9-203ENST00000397378 IGLV3-19P01714 112 aa9.93□□□□□ -0.82
NEDD9-203ENST00000397378 CISD3P0C7P0 127 aa9.93□□□□□ -0.82
NEDD9-203ENST00000397378 IRF1P10914 325 aa9.93□□□□□ -0.82
NEDD9-203ENST00000397378 DGKGP49619 791 aa9.93□□□□□ -0.82
NEDD9-203ENST00000397378 SLC5A3P53794 718 aa9.93□□□□□ -0.82
NEDD9-203ENST00000397378 ERVPABLB-1P60509 514 aa9.93□□□□□ -0.82
NEDD9-203ENST00000397378 TNNC1P63316 161 aa9.93□□□□□ -0.82
NEDD9-203ENST00000397378 TLE1Q04724 770 aa9.93□□□□□ -0.82
NEDD9-203ENST00000397378 ILKQ13418 452 aa9.93□□□□□ -0.82
NEDD9-203ENST00000397378 ENPP2Q13822 863 aa9.93□□□□□ -0.82
NEDD9-203ENST00000397378 WDR72Q3MJ13 1102 aa9.93□□□□□ -0.82
NEDD9-203ENST00000397378 RRAGBQ5VZM2 374 aa9.93□□□□□ -0.82
NEDD9-203ENST00000397378 CCDC81Q6ZN84 652 aa9.93□□□□□ -0.82
NEDD9-203ENST00000397378 BRAPQ7Z569 592 aa9.93□□□□□ -0.82
NEDD9-203ENST00000397378 FAM35AQ86V20 835 aa9.93□□□□□ -0.82
NEDD9-203ENST00000397378 CACTIN-AS1Q8N1I8 211 aa9.93□□□□□ -0.82
NEDD9-203ENST00000397378 BIRC7Q96CA5 298 aa9.93□□□□□ -0.82
NEDD9-203ENST00000397378 SMARCD1Q96GM5 515 aa9.93□□□□□ -0.82
NEDD9-203ENST00000397378 KCNK16Q96T55 309 aa9.93□□□□□ -0.82
NEDD9-203ENST00000397378 ELF4Q99607 663 aaPredicted RBP9.93□□□□□ -0.82
NEDD9-203ENST00000397378 KLF16Q9BXK1 252 aaPredicted RBP9.93□□□□□ -0.82
NEDD9-203ENST00000397378 ACE2Q9BYF1 805 aaPredicted RBP9.93□□□□□ -0.82
NEDD9-203ENST00000397378 NACA2Q9H009 215 aa9.93□□□□□ -0.82
NEDD9-203ENST00000397378 PCED1AQ9H1Q7 454 aa9.93□□□□□ -0.82
NEDD9-203ENST00000397378 OSGEPQ9NPF4 335 aa9.93□□□□□ -0.82
NEDD9-203ENST00000397378 DMAP1Q9NPF5 467 aaPredicted RBP9.93□□□□□ -0.82
NEDD9-203ENST00000397378 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.93□□□□□ -0.82
NEDD9-203ENST00000397378 THSD1Q9NS62 852 aa9.93□□□□□ -0.82
NEDD9-203ENST00000397378 STARD5Q9NSY2 213 aa9.93□□□□□ -0.82
NEDD9-203ENST00000397378 WDR70Q9NW82 654 aa9.93□□□□□ -0.82
NEDD9-203ENST00000397378 ADAMTS1Q9UHI8 967 aa9.93□□□□□ -0.82
NEDD9-203ENST00000397378 LSM7Q9UK45 103 aaKnown RBP9.93□□□□□ -0.82
NEDD9-203ENST00000397378 FBXO10Q9UK96 956 aa9.93□□□□□ -0.82
NEDD9-203ENST00000397378 FSBPO95073 299 aa9.92□□□□□ -0.82
NEDD9-203ENST00000397378 MT-CO3P00414 261 aa9.92□□□□□ -0.82
NEDD9-203ENST00000397378 IDEP14735 1019 aa9.92□□□□□ -0.82
NEDD9-203ENST00000397378 GJB2P29033 226 aa9.92□□□□□ -0.82
NEDD9-203ENST00000397378 ACSL1P33121 698 aa9.92□□□□□ -0.82
NEDD9-203ENST00000397378 GOLGA8FQ08AF8 430 aa9.92□□□□□ -0.82
NEDD9-203ENST00000397378 GOLGA8DPQ0D2H9 430 aa9.92□□□□□ -0.82
NEDD9-203ENST00000397378 TPGS1Q6ZTW0 290 aa9.92□□□□□ -0.82
NEDD9-203ENST00000397378 PAQR9Q6ZVX9 377 aa9.92□□□□□ -0.82
NEDD9-203ENST00000397378 RFFLQ8WZ73 363 aa9.92□□□□□ -0.82
NEDD9-203ENST00000397378 VCPIP1Q96JH7 1222 aa9.92□□□□□ -0.82
NEDD9-203ENST00000397378 FBXO44Q9H4M3 255 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms