RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 HHLA1C9JL84 531 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 GRAP2O75791 330 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 KRT37O76014 449 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 COMTP21964 271 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 PSMA2P25787 234 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 SCNN1AP37088 669 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 SLC1A1P43005 524 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 DNA2P51530 1060 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 LMNB2Q03252 620 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 PIGHQ14442 188 aaPredicted RBP13.82□□□□□ -0.2
SEC13-209ENST00000397117 MGAT5BQ3V5L5 792 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 RAB41Q5JT25 222 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 NT5DC3Q86UY8 548 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 UBE2Q2Q8WVN8 375 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 C8orf48Q96LL4 319 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 SEPT5Q99719 369 aaPredicted RBP13.82□□□□□ -0.2
SEC13-209ENST00000397117 PARD6AQ9NPB6 346 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 CNGB3Q9NQW8 809 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 SLC27A5Q9Y2P5 690 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 HYOU1Q9Y4L1 999 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 MAP1BP46821 2468 aaKnown RBP13.82□□□□□ -0.2
SEC13-209ENST00000397117 TICRRQ7Z2Z1 1910 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 MYH10P35580 1976 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 NRG2O14511 850 aaPredicted RBP13.82□□□□□ -0.2
SEC13-209ENST00000397117 ZBED1O96006 694 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 USP17L7P0C7H9 530 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 PDGFRAP16234 1089 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 MAN1A1P33908 653 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 SSR1P43307 286 aaKnown RBP13.82□□□□□ -0.2
SEC13-209ENST00000397117 TUFMP49411 452 aaKnown RBP13.82□□□□□ -0.2
SEC13-209ENST00000397117 RPL10AP62906 217 aaKnown RBP13.82□□□□□ -0.2
SEC13-209ENST00000397117 DUSP4Q13115 394 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 DDR2Q16832 855 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 PAPD7Q5XG87 772 aaKnown RBP13.82□□□□□ -0.2
SEC13-209ENST00000397117 TPGS2Q68CL5 300 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 SLC26A9Q7LBE3 791 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 GPRIN1Q7Z2K8 1008 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 EMC1Q8N766 993 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 UBL4BQ8N7F7 174 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 JOSD2Q8TAC2 188 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 FNIP1Q8TF40 1166 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 CLEC4CQ8WTT0 213 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 GOLGA1Q92805 767 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 FAM149B1Q96BN6 582 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 TCEAL4Q96EI5 215 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 PIWIL1Q96J94 861 aaKnown RBP13.82□□□□□ -0.2
SEC13-209ENST00000397117 RTKNQ9BST9 563 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 ULBP1Q9BZM6 244 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 CHRDQ9H2X0 955 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 AFF4Q9UHB7 1163 aaKnown RBP13.82□□□□□ -0.2
SEC13-209ENST00000397117 PACSIN2Q9UNF0 486 aaPredicted RBP13.82□□□□□ -0.2
SEC13-209ENST00000397117 SAR1BQ9Y6B6 198 aa13.82□□□□□ -0.2
SEC13-209ENST00000397117 MIF4GDA9UHW6 222 aaKnown RBP13.81□□□□□ -0.2
SEC13-209ENST00000397117 MAN2B1O00754 1011 aa13.81□□□□□ -0.2
SEC13-209ENST00000397117 HSF2BPO75031 334 aa13.81□□□□□ -0.2
SEC13-209ENST00000397117 SEC24AO95486 1093 aa13.81□□□□□ -0.2
SEC13-209ENST00000397117 GLI1P08151 1106 aa13.81□□□□□ -0.2
SEC13-209ENST00000397117 HAPLN1P10915 354 aaPredicted RBP13.81□□□□□ -0.2
SEC13-209ENST00000397117 GPD1P21695 349 aa13.81□□□□□ -0.2
SEC13-209ENST00000397117 SLC5A3P53794 718 aa13.81□□□□□ -0.2
SEC13-209ENST00000397117 TUBB2AQ13885 445 aa13.81□□□□□ -0.2
SEC13-209ENST00000397117 TAF5Q15542 800 aa13.81□□□□□ -0.2
SEC13-209ENST00000397117 FAM78AQ5JUQ0 283 aa13.81□□□□□ -0.2
SEC13-209ENST00000397117 TCEAL8Q8IYN2 117 aa13.81□□□□□ -0.2
SEC13-209ENST00000397117 NUP93Q8N1F7 819 aa13.81□□□□□ -0.2
SEC13-209ENST00000397117 TUBB2BQ9BVA1 445 aa13.81□□□□□ -0.2
SEC13-209ENST00000397117 TLR10Q9BXR5 811 aa13.81□□□□□ -0.2
SEC13-209ENST00000397117 ZFP14Q9HCL3 533 aa13.81□□□□□ -0.2
SEC13-209ENST00000397117 TRPV5Q9NQA5 729 aa13.81□□□□□ -0.2
SEC13-209ENST00000397117 TMEM59LQ9UK28 342 aa13.81□□□□□ -0.2
SEC13-209ENST00000397117 CDV3Q9UKY7 258 aaKnown RBP13.81□□□□□ -0.2
SEC13-209ENST00000397117 SNX12Q9UMY4 172 aa13.81□□□□□ -0.2
SEC13-209ENST00000397117 CHD8Q9HCK8 2581 aa13.81□□□□□ -0.2
SEC13-209ENST00000397117 DCDC2BA2VCK2 349 aa13.8□□□□□ -0.2
SEC13-209ENST00000397117 C2CD4BA6NLJ0 364 aa13.8□□□□□ -0.2
SEC13-209ENST00000397117 VNN2O95498 520 aa13.8□□□□□ -0.2
SEC13-209ENST00000397117 LRG1P02750 347 aa13.8□□□□□ -0.2
SEC13-209ENST00000397117 ATF2P15336 505 aa13.8□□□□□ -0.2
SEC13-209ENST00000397117 SDC4P31431 198 aa13.8□□□□□ -0.2
SEC13-209ENST00000397117 ELF1P32519 619 aa13.8□□□□□ -0.2
SEC13-209ENST00000397117 CCR2P41597 374 aa13.8□□□□□ -0.2
SEC13-209ENST00000397117 ZNF143P52747 638 aaPredicted RBP13.8□□□□□ -0.2
SEC13-209ENST00000397117 NRLP54845 237 aa13.8□□□□□ -0.2
SEC13-209ENST00000397117 DAOAP59103 153 aa13.8□□□□□ -0.2
SEC13-209ENST00000397117 YWHAZP63104 245 aaKnown RBP13.8□□□□□ -0.2
SEC13-209ENST00000397117 IFRD2Q12894 506 aaPredicted RBP13.8□□□□□ -0.2
SEC13-209ENST00000397117 GRM2Q14416 872 aa13.8□□□□□ -0.2
SEC13-209ENST00000397117 ARCQ7LC44 396 aa13.8□□□□□ -0.2
SEC13-209ENST00000397117 TTC9BQ8N6N2 239 aa13.8□□□□□ -0.2
SEC13-209ENST00000397117 NIPA2Q8N8Q9 360 aa13.8□□□□□ -0.2
SEC13-209ENST00000397117 SCAMP5Q8TAC9 235 aa13.8□□□□□ -0.2
SEC13-209ENST00000397117 RXFP2Q8WXD0 754 aa13.8□□□□□ -0.2
SEC13-209ENST00000397117 IRGQQ8WZA9 623 aa13.8□□□□□ -0.2
SEC13-209ENST00000397117 NDRG1Q92597 394 aaKnown RBP13.8□□□□□ -0.2
SEC13-209ENST00000397117 HES6Q96HZ4 224 aa13.8□□□□□ -0.2
SEC13-209ENST00000397117 PSMB7Q99436 277 aa13.8□□□□□ -0.2
SEC13-209ENST00000397117 CORO1BQ9BR76 489 aa13.8□□□□□ -0.2
SEC13-209ENST00000397117 CNPY3Q9BT09 278 aa13.8□□□□□ -0.2
SEC13-209ENST00000397117 TRMT61BQ9BVS5 477 aaKnown RBP13.8□□□□□ -0.2
SEC13-209ENST00000397117 FBXO44Q9H4M3 255 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms