RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 CEP83Q9Y592 693 aa14.56□□□□□ -0.08
SEC13-204ENST00000397099 GFRA2O00451 464 aa14.55□□□□□ -0.08
SEC13-204ENST00000397099 TIMM44O43615 452 aa14.55□□□□□ -0.08
SEC13-204ENST00000397099 RHOBTB1O94844 696 aa14.55□□□□□ -0.08
SEC13-204ENST00000397099 KLKB1P03952 638 aa14.55□□□□□ -0.08
SEC13-204ENST00000397099 GLI1P08151 1106 aa14.55□□□□□ -0.08
SEC13-204ENST00000397099 TGM1P22735 817 aa14.55□□□□□ -0.08
SEC13-204ENST00000397099 KRT9P35527 623 aa14.55□□□□□ -0.08
SEC13-204ENST00000397099 USP8P40818 1118 aa14.55□□□□□ -0.08
SEC13-204ENST00000397099 SLC11A2P49281 568 aa14.55□□□□□ -0.08
SEC13-204ENST00000397099 RGS7P49802 495 aa14.55□□□□□ -0.08
SEC13-204ENST00000397099 KDSRQ06136 332 aa14.55□□□□□ -0.08
SEC13-204ENST00000397099 ARHGAP44Q17R89 818 aa14.55□□□□□ -0.08
SEC13-204ENST00000397099 C10orf76Q5T2E6 689 aa14.55□□□□□ -0.08
SEC13-204ENST00000397099 RASSF3Q86WH2 238 aa14.55□□□□□ -0.08
SEC13-204ENST00000397099 DENND1CQ8IV53 801 aa14.55□□□□□ -0.08
SEC13-204ENST00000397099 ZNF513Q8N8E2 541 aaPredicted RBP14.55□□□□□ -0.08
SEC13-204ENST00000397099 TXNDC5Q8NBS9 432 aaKnown RBP14.55□□□□□ -0.08
SEC13-204ENST00000397099 GPT2Q8TD30 523 aa14.55□□□□□ -0.08
SEC13-204ENST00000397099 UCMAQ8WVF2 138 aa14.55□□□□□ -0.08
SEC13-204ENST00000397099 SERPINB11Q96P15 392 aa14.55□□□□□ -0.08
SEC13-204ENST00000397099 SLC4A5Q9BY07 1137 aa14.55□□□□□ -0.08
SEC13-204ENST00000397099 SEMA4GQ9NTN9 838 aa14.55□□□□□ -0.08
SEC13-204ENST00000397099 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.55□□□□□ -0.08
SEC13-204ENST00000397099 EML5Q05BV3 1969 aa14.54□□□□□ -0.08
SEC13-204ENST00000397099 RALGAPA1Q6GYQ0 2036 aa14.54□□□□□ -0.08
SEC13-204ENST00000397099 PES1O00541 588 aaKnown RBP14.54□□□□□ -0.08
SEC13-204ENST00000397099 KLF8O95600 359 aaPredicted RBP14.54□□□□□ -0.08
SEC13-204ENST00000397099 HMBSP08397 361 aa14.54□□□□□ -0.08
SEC13-204ENST00000397099 NCAM1P13591 858 aa14.54□□□□□ -0.08
SEC13-204ENST00000397099 HNRNPLP14866 589 aaKnown RBP eCLIP14.54□□□□□ -0.08
SEC13-204ENST00000397099 NTSR1P30989 418 aa14.54□□□□□ -0.08
SEC13-204ENST00000397099 TIE1P35590 1138 aa14.54□□□□□ -0.08
SEC13-204ENST00000397099 EIF4HQ15056 248 aaKnown RBP14.54□□□□□ -0.08
SEC13-204ENST00000397099 ELF2Q15723 593 aa14.54□□□□□ -0.08
SEC13-204ENST00000397099 STX1AQ16623 288 aa14.54□□□□□ -0.08
SEC13-204ENST00000397099 MIIPQ5JXC2 388 aa14.54□□□□□ -0.08
SEC13-204ENST00000397099 MPP7Q5T2T1 576 aa14.54□□□□□ -0.08
SEC13-204ENST00000397099 CCDC183Q5T5S1 534 aa14.54□□□□□ -0.08
SEC13-204ENST00000397099 ADGRF1Q5T601 910 aa14.54□□□□□ -0.08
SEC13-204ENST00000397099 FYB2Q5VWT5 728 aa14.54□□□□□ -0.08
SEC13-204ENST00000397099 ALLCQ8N6M5 410 aa14.54□□□□□ -0.08
SEC13-204ENST00000397099 EDEM1Q92611 657 aa14.54□□□□□ -0.08
SEC13-204ENST00000397099 MIS12Q9H081 205 aa14.54□□□□□ -0.08
SEC13-204ENST00000397099 NAT10Q9H0A0 1025 aaKnown RBP14.54□□□□□ -0.08
SEC13-204ENST00000397099 PLCB1Q9NQ66 1216 aa14.54□□□□□ -0.08
SEC13-204ENST00000397099 ASNSD1Q9NWL6 643 aa14.54□□□□□ -0.08
SEC13-204ENST00000397099 DNAJC12Q9UKB3 198 aa14.54□□□□□ -0.08
SEC13-204ENST00000397099 PCDHGA5Q9Y5G8 931 aa14.54□□□□□ -0.08
SEC13-204ENST00000397099 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.53□□□□□ -0.08
SEC13-204ENST00000397099 MED19A0JLT2 244 aaPredicted RBP14.53□□□□□ -0.08
SEC13-204ENST00000397099 TYW5A2RUC4 315 aaKnown RBP14.53□□□□□ -0.08
SEC13-204ENST00000397099 BECN2A8MW95 431 aa14.53□□□□□ -0.08
SEC13-204ENST00000397099 CAPN9O14815 690 aa14.53□□□□□ -0.08
SEC13-204ENST00000397099 IGLV3-27P01718 113 aa14.53□□□□□ -0.08
SEC13-204ENST00000397099 CISD3P0C7P0 127 aa14.53□□□□□ -0.08
SEC13-204ENST00000397099 ATXN1P54253 815 aaKnown RBP14.53□□□□□ -0.08
SEC13-204ENST00000397099 YWHAZP63104 245 aaKnown RBP14.53□□□□□ -0.08
SEC13-204ENST00000397099 PDCLQ13371 301 aa14.53□□□□□ -0.08
SEC13-204ENST00000397099 CSRP2Q16527 193 aa14.53□□□□□ -0.08
SEC13-204ENST00000397099 EFHC1Q5JVL4 640 aa14.53□□□□□ -0.08
SEC13-204ENST00000397099 SPDYCQ5MJ68 293 aa14.53□□□□□ -0.08
SEC13-204ENST00000397099 FKBP15Q5T1M5 1219 aa14.53□□□□□ -0.08
SEC13-204ENST00000397099 CDKAL1Q5VV42 579 aa14.53□□□□□ -0.08
SEC13-204ENST00000397099 PRR23CQ6ZRP0 262 aa14.53□□□□□ -0.08
SEC13-204ENST00000397099 ANKS1BQ7Z6G8 1248 aa14.53□□□□□ -0.08
SEC13-204ENST00000397099 KBTBD6Q86V97 674 aa14.53□□□□□ -0.08
SEC13-204ENST00000397099 ZDHHC17Q8IUH5 632 aa14.53□□□□□ -0.08
SEC13-204ENST00000397099 SCUBE3Q8IX30 993 aa14.53□□□□□ -0.08
SEC13-204ENST00000397099 FAM71AQ8IYT1 594 aa14.53□□□□□ -0.08
SEC13-204ENST00000397099 CCDC33Q8N5R6 958 aa14.53□□□□□ -0.08
SEC13-204ENST00000397099 DDI1Q8WTU0 396 aa14.53□□□□□ -0.08
SEC13-204ENST00000397099 FAM149B1Q96BN6 582 aa14.53□□□□□ -0.08
SEC13-204ENST00000397099 SPACA7Q96KW9 195 aa14.53□□□□□ -0.08
SEC13-204ENST00000397099 POPDC2Q9HBU9 364 aa14.53□□□□□ -0.08
SEC13-204ENST00000397099 SAMSN1Q9NSI8 373 aaKnown RBP14.53□□□□□ -0.08
SEC13-204ENST00000397099 SFMBT1Q9UHJ3 866 aa14.53□□□□□ -0.08
SEC13-204ENST00000397099 TLR6Q9Y2C9 796 aa14.53□□□□□ -0.08
SEC13-204ENST00000397099 PLXND1Q9Y4D7 1925 aa14.53□□□□□ -0.08
SEC13-204ENST00000397099 SLC2A3P11169 496 aa14.52□□□□□ -0.09
SEC13-204ENST00000397099 CHRM1P11229 460 aaPredicted RBP14.52□□□□□ -0.09
SEC13-204ENST00000397099 DPP6P42658 865 aa14.52□□□□□ -0.09
SEC13-204ENST00000397099 TBX4P57082 545 aa14.52□□□□□ -0.09
SEC13-204ENST00000397099 MYL5Q02045 173 aa14.52□□□□□ -0.09
SEC13-204ENST00000397099 CCDC6Q16204 474 aa14.52□□□□□ -0.09
SEC13-204ENST00000397099 KLHDC7AQ5VTJ3 777 aa14.52□□□□□ -0.09
SEC13-204ENST00000397099 DENND1BQ6P3S1 775 aa14.52□□□□□ -0.09
SEC13-204ENST00000397099 GJB7Q6PEY0 223 aa14.52□□□□□ -0.09
SEC13-204ENST00000397099 TOGARAM2Q6ZUX3 1019 aa14.52□□□□□ -0.09
SEC13-204ENST00000397099 C12orf50Q8NA57 414 aaPredicted RBP14.52□□□□□ -0.09
SEC13-204ENST00000397099 MSANTD4Q8NCY6 345 aa14.52□□□□□ -0.09
SEC13-204ENST00000397099 C1orf131Q8NDD1 294 aaKnown RBP14.52□□□□□ -0.09
SEC13-204ENST00000397099 WFIKKN2Q8TEU8 576 aa14.52□□□□□ -0.09
SEC13-204ENST00000397099 NDRG1Q92597 394 aaKnown RBP14.52□□□□□ -0.09
SEC13-204ENST00000397099 TMA16Q96EY4 203 aaKnown RBP14.52□□□□□ -0.09
SEC13-204ENST00000397099 PPP1R13BQ96KQ4 1090 aa14.52□□□□□ -0.09
SEC13-204ENST00000397099 RTKNQ9BST9 563 aa14.52□□□□□ -0.09
SEC13-204ENST00000397099 STK33Q9BYT3 514 aa14.52□□□□□ -0.09
SEC13-204ENST00000397099 ARRDC1-AS1Q9H2J1 176 aa14.52□□□□□ -0.09
SEC13-204ENST00000397099 SIX2Q9NPC8 291 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms