RNA–Protein interactions for RNA: ENST00000397081.7

RAPGEF4-201, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-201ENST00000397081 SKA1Q96BD8 255 aa15.19■□□□□ 0.02
RAPGEF4-201ENST00000397081 HPDLQ96IR7 371 aa15.19■□□□□ 0.02
RAPGEF4-201ENST00000397081 GORASP1Q9BQQ3 440 aa15.19■□□□□ 0.02
RAPGEF4-201ENST00000397081 COPS7BQ9H9Q2 264 aaPredicted RBP15.19■□□□□ 0.02
RAPGEF4-201ENST00000397081 BTBD7Q9P203 1132 aa15.19■□□□□ 0.02
RAPGEF4-201ENST00000397081 TSPAN16Q9UKR8 245 aa15.19■□□□□ 0.02
RAPGEF4-201ENST00000397081 STAMBPO95630 424 aa15.18■□□□□ 0.02
RAPGEF4-201ENST00000397081 TRUB2O95900 331 aaKnown RBP15.18■□□□□ 0.02
RAPGEF4-201ENST00000397081 ARL1P40616 181 aaPredicted RBP15.18■□□□□ 0.02
RAPGEF4-201ENST00000397081 PDE1CQ14123 709 aaPredicted RBP15.18■□□□□ 0.02
RAPGEF4-201ENST00000397081 DHDDSQ86SQ9 333 aa15.18■□□□□ 0.02
RAPGEF4-201ENST00000397081 WDTC1Q8N5D0 677 aa15.18■□□□□ 0.02
RAPGEF4-201ENST00000397081 OLFM3Q96PB7 478 aa15.18■□□□□ 0.02
RAPGEF4-201ENST00000397081 LGMNQ99538 433 aa15.18■□□□□ 0.02
RAPGEF4-201ENST00000397081 WDR55Q9H6Y2 383 aaPredicted RBP15.18■□□□□ 0.02
RAPGEF4-201ENST00000397081 THAP1Q9NVV9 213 aa15.18■□□□□ 0.02
RAPGEF4-201ENST00000397081 FAF1Q9UNN5 650 aaPredicted RBP15.18■□□□□ 0.02
RAPGEF4-201ENST00000397081 TBC1D12O60347 775 aa15.18■□□□□ 0.02
RAPGEF4-201ENST00000397081 NDST1P52848 882 aa15.18■□□□□ 0.02
RAPGEF4-201ENST00000397081 DLG1Q12959 904 aa15.18■□□□□ 0.02
RAPGEF4-201ENST00000397081 FLOT2Q14254 428 aa15.18■□□□□ 0.02
RAPGEF4-201ENST00000397081 TMCO4Q5TGY1 634 aa15.18■□□□□ 0.02
RAPGEF4-201ENST00000397081 KRT80Q6KB66 452 aa15.18■□□□□ 0.02
RAPGEF4-201ENST00000397081 WDR49Q8IV35 697 aa15.18■□□□□ 0.02
RAPGEF4-201ENST00000397081 TEX13BQ9BXU2 312 aa15.18■□□□□ 0.02
RAPGEF4-201ENST00000397081 SEMA6AQ9H2E6 1030 aa15.18■□□□□ 0.02
RAPGEF4-201ENST00000397081 KCNK13Q9HB14 408 aa15.18■□□□□ 0.02
RAPGEF4-201ENST00000397081 SP2Q02086 613 aa15.18■□□□□ 0.02
RAPGEF4-201ENST00000397081 OLIG2Q13516 323 aa15.18■□□□□ 0.02
RAPGEF4-201ENST00000397081 NRF1Q16656 503 aa15.18■□□□□ 0.02
RAPGEF4-201ENST00000397081 CTC1Q2NKJ3 1217 aa15.18■□□□□ 0.02
RAPGEF4-201ENST00000397081 CNPY1Q3B7I2 92 aa15.18■□□□□ 0.02
RAPGEF4-201ENST00000397081 NIPA1Q7RTP0 329 aa15.18■□□□□ 0.02
RAPGEF4-201ENST00000397081 AZIN2Q96A70 460 aa15.18■□□□□ 0.02
RAPGEF4-201ENST00000397081 KIF12Q96FN5 646 aa15.18■□□□□ 0.02
RAPGEF4-201ENST00000397081 Q9H521 79 aa15.18■□□□□ 0.02
RAPGEF4-201ENST00000397081 CAB39LQ9H9S4 337 aa15.18■□□□□ 0.02
RAPGEF4-201ENST00000397081 C20orf96Q9NUD7 363 aaPredicted RBP15.18■□□□□ 0.02
RAPGEF4-201ENST00000397081 RNASEH1O60930 286 aaKnown RBP15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 PGK2P07205 417 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 TPH1P17752 444 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 MX2P20592 715 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 GARSP41250 739 aaKnown RBP15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 POU5F1BQ06416 359 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 LAMTOR4Q0VGL1 99 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 CA9Q16790 459 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 SPDYE2Q495Y8 402 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 CCDC14Q49A88 953 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 CMTM5Q96DZ9 223 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 NTPCRQ9BSD7 190 aaKnown RBP15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 TRPV6Q9H1D0 765 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 EURLQ9NYK6 297 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 GTSE1Q9NYZ3 720 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 CYTH4Q9UIA0 394 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 TLK1Q9UKI8 766 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 KLHL2O95198 593 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 KCNA2P16389 499 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 CYP2F1P24903 491 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 PMLP29590 882 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 LIN52Q52LA3 116 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 NET1Q7Z628 596 aaPredicted RBP15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 USP33Q8TEY7 942 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 TMEM176AQ96HP8 235 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 CNPY3Q9BT09 278 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 FAM49AQ9H0Q0 323 aaPredicted RBP15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 SLC39A10Q9ULF5 831 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 FARP1Q9Y4F1 1045 aaPredicted RBP15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 HNRNPRO43390 633 aaKnown RBP15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 TPST1O60507 370 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 SPAG6O75602 509 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 CLPTM1O96005 669 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 EDN1P05305 212 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 FAM47CQ5HY64 1035 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 FAM183BPQ6ZVS7 135 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 MARK2Q7KZI7 788 aaKnown RBP15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 SPATA6LQ8N4H0 392 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 FAM156AQ8NDB6 213 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 EXT2Q93063 718 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 CDRT15Q96T59 188 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 LPIN3Q9BQK8 851 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 WDR83Q9BRX9 315 aaKnown RBP15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 METTL18O95568 372 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 RPS6KA3P51812 740 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 PDK3Q15120 406 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 SFT2D3Q587I9 215 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 DEFB129Q9H1M3 183 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 TASP1Q9H6P5 420 aa15.17■□□□□ 0.02
RAPGEF4-201ENST00000397081 SMAPO00193 183 aa15.16■□□□□ 0.02
RAPGEF4-201ENST00000397081 CSPG5O95196 566 aa15.16■□□□□ 0.02
RAPGEF4-201ENST00000397081 BPGMP07738 259 aa15.16■□□□□ 0.02
RAPGEF4-201ENST00000397081 OPTNQ96CV9 577 aa15.16■□□□□ 0.02
RAPGEF4-201ENST00000397081 CATSPER2Q96P56 530 aa15.16■□□□□ 0.02
RAPGEF4-201ENST00000397081 RNF157Q96PX1 679 aa15.16■□□□□ 0.02
RAPGEF4-201ENST00000397081 SNRNP25Q9BV90 132 aaKnown RBP15.16■□□□□ 0.02
RAPGEF4-201ENST00000397081 NUF2Q9BZD4 464 aa15.16■□□□□ 0.02
RAPGEF4-201ENST00000397081 ZNF518BQ9C0D4 1074 aa15.16■□□□□ 0.02
RAPGEF4-201ENST00000397081 C20orf27Q9GZN8 174 aa15.16■□□□□ 0.02
RAPGEF4-201ENST00000397081 CAAP1Q9H8G2 361 aa15.16■□□□□ 0.02
RAPGEF4-201ENST00000397081 ZNF711Q9Y462 761 aa15.16■□□□□ 0.02
RAPGEF4-201ENST00000397081 ZNF831Q5JPB2 1677 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms