RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 PTPN11Q06124 597 aaPredicted RBP9.61□□□□□ -0.87
NDE1-201ENST00000396354 FAM219BQ5XKK7 198 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 XYLT1Q86Y38 959 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 TEX9Q8N6V9 391 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 BANPQ8N9N5 519 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 RBM15BQ8NDT2 890 aaKnown RBP9.61□□□□□ -0.87
NDE1-201ENST00000396354 SMC1BQ8NDV3 1235 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 OR6B3Q8NGW1 331 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 BTBD10Q9BSF8 475 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 SMARCAD1Q9H4L7 1026 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 TRIP12Q14669 1992 aaPredicted RBP9.61□□□□□ -0.87
NDE1-201ENST00000396354 CCDC189A1A4V9 331 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 C3orf70A6NLC5 250 aaPredicted RBP9.61□□□□□ -0.87
NDE1-201ENST00000396354 KCNK1O00180 336 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 B4GALT4O60513 344 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 AP1G2O75843 785 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 LINGO3P0C6S8 592 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 SMPD1P17405 629 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 AP1B1Q10567 949 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 IFRD2Q12894 506 aaPredicted RBP9.61□□□□□ -0.87
NDE1-201ENST00000396354 NME3Q13232 169 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 TTLL4Q14679 1199 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 RALGPS1Q5JS13 557 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 EFHC2Q5JST6 749 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 CMC1Q7Z7K0 106 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 TP53INP2Q8IXH6 220 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 SLC4A11Q8NBS3 891 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 MS4A3Q96HJ5 214 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 HPDLQ96IR7 371 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 WDR27A2RRH5 827 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 CFLARO15519 480 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 PRPF4O43172 522 aaKnown RBP eCLIP9.61□□□□□ -0.87
NDE1-201ENST00000396354 KIF1CO43896 1103 aaKnown RBP9.61□□□□□ -0.87
NDE1-201ENST00000396354 HBP1O60381 514 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 METTL18O95568 372 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 GNAT1P11488 350 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 TCN1P20061 433 aaPredicted RBP9.61□□□□□ -0.87
NDE1-201ENST00000396354 OSBPP22059 807 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 GRM1Q13255 1194 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 GOLGA7BQ2TAP0 167 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 PRAMEF19Q5SWL8 479 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 CES4AQ5XG92 561 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 IZUMO2Q6UXV1 221 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 C2orf69Q8N8R5 385 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 PNPLA1Q8N8W4 532 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 PPFIBP2Q8ND30 876 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 PHC3Q8NDX5 983 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 E2F7Q96AV8 911 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 BCO2Q9BYV7 579 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 MROH8Q9H579 483 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 DDX56Q9NY93 547 aaKnown RBP9.61□□□□□ -0.87
NDE1-201ENST00000396354 TNFSF13BQ9Y275 285 aa9.61□□□□□ -0.87
NDE1-201ENST00000396354 CCDC160A6NGH7 325 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 SMNDC1O75940 238 aaKnown RBP eCLIP9.6□□□□□ -0.87
NDE1-201ENST00000396354 KRT37O76014 449 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 SOX11P35716 441 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 MLH1P40692 756 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 HUNKP57058 714 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 FOXK1P85037 733 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 KLC1Q07866 573 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 EGFL6Q8IUX8 553 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 MAGEC3Q8TD91 643 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 MARK4Q96L34 752 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 ZMAT2Q96NC0 199 aaKnown RBP9.6□□□□□ -0.87
NDE1-201ENST00000396354 TSC22D3Q99576 134 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 ETNK2Q9NVF9 386 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.6□□□□□ -0.87
NDE1-201ENST00000396354 ERAP1Q9NZ08 941 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 SLC24A2Q9UI40 661 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 E9PBE3 544 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 C2CD2LO14523 706 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 ITM2AO43736 263 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 TSPAN1O60635 241 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 KLHL41O60662 606 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 OPHN1O60890 802 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 ABHD2P08910 425 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 C6orf222P0C671 652 aaPredicted RBP9.6□□□□□ -0.87
NDE1-201ENST00000396354 ERVK-10P10266 1014 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 CCDC130P13994 396 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 IGFBP6P24592 240 aaPredicted RBP9.6□□□□□ -0.87
NDE1-201ENST00000396354 CDH5P33151 784 aaPredicted RBP9.6□□□□□ -0.87
NDE1-201ENST00000396354 ABCD1P33897 745 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 YWHAZP63104 245 aaKnown RBP9.6□□□□□ -0.87
NDE1-201ENST00000396354 USP4Q13107 963 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 SNAPC2Q13487 334 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 KIZQ2M2Z5 673 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 SLC45A4Q5BKX6 768 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 PMF1Q6P1K2 205 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 ADGRD1Q6QNK2 874 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 LRRC74BQ6ZQY2 392 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 BBS12Q6ZW61 710 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 RIBC1Q8N443 379 aaPredicted RBP9.6□□□□□ -0.87
NDE1-201ENST00000396354 SPATA6LQ8N4H0 392 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 NPLOC4Q8TAT6 608 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 NKD2Q969F2 451 aaPredicted RBP9.6□□□□□ -0.87
NDE1-201ENST00000396354 TXNDC16Q9P2K2 825 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 STOML1Q9UBI4 398 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 SIGLEC16A6NMB1 481 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 APOC4-APOC2K7ER74 178 aa9.6□□□□□ -0.87
NDE1-201ENST00000396354 TRUB2O95900 331 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms