RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 MB21D1Q8N884 522 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 RASGRP4Q8TDF6 673 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 TRUB1Q8WWH5 349 aaKnown RBP9.17□□□□□ -0.94
MSH5-205ENST00000395853 PSPC1Q8WXF1 523 aaKnown RBP9.17□□□□□ -0.94
MSH5-205ENST00000395853 SEPT1Q8WYJ6 367 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 SEC14L1Q92503 715 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 HSPH1Q92598 858 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 NRBF2Q96F24 287 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 FAM161BQ96MY7 647 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 CDK5RAP1Q96SZ6 601 aaKnown RBP9.17□□□□□ -0.94
MSH5-205ENST00000395853 TDRD1Q9BXT4 1180 aaKnown RBP9.17□□□□□ -0.94
MSH5-205ENST00000395853 MROQ9BYG7 248 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 RHOBTB2Q9BYZ6 727 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 KCNK9Q9NPC2 374 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 TXNDC16Q9P2K2 825 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 BCAP29Q9UHQ4 241 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 KIAA0100Q14667 2235 aaKnown RBP9.17□□□□□ -0.94
MSH5-205ENST00000395853 F8W810 466 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 H3BNX3 289 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 CIB2O75838 187 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 KRT7P08729 469 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 ATF4P18848 351 aaPredicted RBP9.17□□□□□ -0.94
MSH5-205ENST00000395853 GJA5P36382 358 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 NR4A2P43354 598 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 SLC26A2P50443 739 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 CACNB3P54284 484 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 ACTR3P61158 418 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 PTGDRQ13258 359 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 AUHQ13825 339 aaKnown RBP9.17□□□□□ -0.94
MSH5-205ENST00000395853 TLR1Q15399 786 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 FBXO43Q4G163 708 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 NLRX1Q86UT6 975 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 ARRDC4Q8NCT1 418 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 SH3KBP1Q96B97 665 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 SLC39A13Q96H72 371 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 TRIM47Q96LD4 638 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 MKRN2Q9H000 416 aaKnown RBP9.17□□□□□ -0.94
MSH5-205ENST00000395853 SLITRK6Q9H5Y7 841 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 LIN7BQ9HAP6 207 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 EPS15L1Q9UBC2 864 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 DBR1Q9UK59 544 aaKnown RBP9.17□□□□□ -0.94
MSH5-205ENST00000395853 COLQQ9Y215 455 aaPredicted RBP9.17□□□□□ -0.94
MSH5-205ENST00000395853 MAGEB16A2A368 324 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 GTPBP10A4D1E9 387 aaKnown RBP9.16□□□□□ -0.94
MSH5-205ENST00000395853 CAPN8A6NHC0 703 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 ZNF23P17027 643 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 PRDX6P30041 224 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 MTIF2P46199 727 aaKnown RBP9.16□□□□□ -0.94
MSH5-205ENST00000395853 GTF2A2P52657 109 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 HK2P52789 917 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 SNTA1Q13424 505 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 KYNUQ16719 465 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 DGKDQ16760 1214 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 LETM2Q2VYF4 491 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 SLC9C1Q4G0N8 1177 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 PPM1LQ5SGD2 360 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 RNASEH2BQ5TBB1 312 aaKnown RBP9.16□□□□□ -0.94
MSH5-205ENST00000395853 UBE2UQ5VVX9 321 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 VSTM1Q6UX27 236 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 ZNF677Q86XU0 584 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 TCAIMQ8N3R3 496 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 ASCC1Q8N9N2 400 aaKnown RBP9.16□□□□□ -0.94
MSH5-205ENST00000395853 MINDY2Q8NBR6 621 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 GALNT11Q8NCW6 608 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 CATSPER1Q8NEC5 780 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 NEDD1Q8NHV4 660 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 TBC1D15Q8TC07 691 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 SCFD2Q8WU76 684 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 SYMPKQ92797 1274 aaKnown RBP9.16□□□□□ -0.94
MSH5-205ENST00000395853 SGK3Q96BR1 496 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 MTMR8Q96EF0 704 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 MS4A4AQ96JQ5 239 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 PTPN18Q99952 460 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 DCUN1D5Q9BTE7 237 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 BTBD2Q9BX70 525 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 TRIT1Q9H3H1 467 aaKnown RBP9.16□□□□□ -0.94
MSH5-205ENST00000395853 RAD21L1Q9H4I0 556 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 DDX4Q9NQI0 724 aaKnown RBP9.16□□□□□ -0.94
MSH5-205ENST00000395853 AGPAT5Q9NUQ2 364 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 GDAP2Q9NXN4 497 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 FNIP2Q9P278 1114 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 PFDN2Q9UHV9 154 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 CDH7Q9ULB5 785 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 RNF112Q9ULX5 631 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 ACOX3O15254 700 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 SHOXO15266 292 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 GH1P01241 217 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 ITGB3P05106 788 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 ZNF3P17036 446 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 RPA1P27694 616 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 GSTM2P28161 218 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 CASP1P29466 404 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 MCM7P33993 719 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 FDFT1P37268 417 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 MAPKAPK2P49137 400 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 BMXP51813 675 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 IL17AQ16552 155 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 SCARA3Q6AZY7 606 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 TTI2Q6NXR4 508 aa9.16□□□□□ -0.94
MSH5-205ENST00000395853 USP17L2Q6R6M4 530 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms